RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PRB4P10163 310 aaPredicted RBP5.86□□□□□ -1.47
COPS3-215ENST00000578317 CRIP1P50238 77 aa5.86□□□□□ -1.47
COPS3-215ENST00000578317 ASCL2Q99929 193 aa5.86□□□□□ -1.47
COPS3-215ENST00000578317 C20orf144Q9BQM9 153 aa5.86□□□□□ -1.47
COPS3-215ENST00000578317 CSTL1Q9H114 145 aa5.86□□□□□ -1.47
COPS3-215ENST00000578317 WFDC10AQ9H1F0 79 aa5.86□□□□□ -1.47
COPS3-215ENST00000578317 LOC102724200A0A096LPH7 203 aaPredicted RBP5.85□□□□□ -1.47
COPS3-215ENST00000578317 FABP5P3A8MUU1 101 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 CRXO43186 299 aaPredicted RBP5.85□□□□□ -1.47
COPS3-215ENST00000578317 ZNF324O75467 553 aaPredicted RBP5.85□□□□□ -1.47
COPS3-215ENST00000578317 IGKV3-20P01619 116 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 GPX1P07203 203 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 GIG44P09565 113 aaPredicted RBP5.85□□□□□ -1.47
COPS3-215ENST00000578317 IGHV4-30-4P0DP06 118 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 RPL23P62829 140 aaKnown RBP5.85□□□□□ -1.47
COPS3-215ENST00000578317 Q6AWC8 147 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 C1QTNF4Q9BXJ3 329 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 TUBA4BQ9H853 241 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 SRD5A3Q9H8P0 318 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 MEGF8Q7Z7M0 2845 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 TRAV21A0A0B4J279 112 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 C19orf71A6NCJ1 209 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 B4DEV8 164 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 K7EN84 100 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 UBE2CO00762 179 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 PFN1P07737 140 aaKnown RBP5.85□□□□□ -1.47
COPS3-215ENST00000578317 FAM162BQ5T6X4 162 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 FAM231DQ6ZW35 169 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 ZC2HC1AQ96GY0 325 aa5.85□□□□□ -1.47
COPS3-215ENST00000578317 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 C7orf71A4D174 169 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 M0R2Z0 102 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 MGST1P10620 155 aaKnown RBP5.84□□□□□ -1.47
COPS3-215ENST00000578317 ZNF80P51504 273 aaPredicted RBP5.84□□□□□ -1.47
COPS3-215ENST00000578317 APOC4P55056 127 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 SPINK13Q1W4C9 94 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 GFI1BQ5VTD9 330 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 SVBPQ8N300 66 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 CSNK1G2-AS1Q8NCQ2 148 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 ISOC2Q96AB3 205 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 C8orf49Q96NF6 230 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 LINC00467Q9BRT7 94 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 OSTCQ9NRP0 149 aa5.84□□□□□ -1.47
COPS3-215ENST00000578317 PRKDCP78527 4128 aaKnown RBP5.83□□□□□ -1.48
COPS3-215ENST00000578317 RPL35AP18077 110 aaKnown RBP5.83□□□□□ -1.48
COPS3-215ENST00000578317 S100A1P23297 94 aa5.83□□□□□ -1.48
COPS3-215ENST00000578317 RNASE4P34096 147 aaKnown RBP5.83□□□□□ -1.48
COPS3-215ENST00000578317 OR5I1Q13606 314 aa5.83□□□□□ -1.48
COPS3-215ENST00000578317 ADIRFQ15847 76 aa5.83□□□□□ -1.48
COPS3-215ENST00000578317 TDRG1Q3Y452 100 aa5.83□□□□□ -1.48
COPS3-215ENST00000578317 PRR9Q5T870 116 aa5.83□□□□□ -1.48
COPS3-215ENST00000578317 TMEM256Q8N2U0 113 aa5.83□□□□□ -1.48
COPS3-215ENST00000578317 NHLRC2Q8NBF2 726 aa5.83□□□□□ -1.48
COPS3-215ENST00000578317 DAZAP1Q96EP5 407 aaKnown RBP5.83□□□□□ -1.48
COPS3-215ENST00000578317 SFRP2Q96HF1 295 aa5.83□□□□□ -1.48
COPS3-215ENST00000578317 TMEM242Q9NWH2 141 aa5.83□□□□□ -1.48
COPS3-215ENST00000578317 NBEAL2Q6ZNJ1 2754 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 TRAV12-2A0A075B6T6 113 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 H7BYZ3 331 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 K7EIL1 84 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 PPP1R2P9O14990 202 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 SH2D1AO60880 128 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 SNAPINO95295 136 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 APOC3P02656 99 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 BTN1A1Q13410 526 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 ZNF575Q86XF7 245 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 XCL2Q9UBD3 114 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 FBN3Q75N90 2809 aa5.82□□□□□ -1.48
COPS3-215ENST00000578317 A0A087WWC5 75 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 TRAV12-3A0A0B4J271 114 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 PRYO14603 147 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 CA1P00915 261 aaPredicted RBP5.81□□□□□ -1.48
COPS3-215ENST00000578317 INSP01308 110 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 P01737 135 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 MT-ND4LP03901 98 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 CXCL1P09341 107 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 FXYD7P58549 80 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 ERVFC1-1P60608 527 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 RHEBQ15382 184 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 IBA57Q5T440 356 aaKnown RBP5.81□□□□□ -1.48
COPS3-215ENST00000578317 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 PRR27Q6MZM9 219 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 ZNF705AQ6ZN79 300 aaPredicted RBP5.81□□□□□ -1.48
COPS3-215ENST00000578317 C1orf158Q8N1D5 194 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 C15orf54Q8N8G6 183 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 KCNS1Q96KK3 526 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 PYGO2Q9BRQ0 406 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 C11orf21Q9P2W6 132 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 TP53TG3Q9ULZ0 132 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 HUWE1Q7Z6Z7 4374 aaKnown RBP5.81□□□□□ -1.48
COPS3-215ENST00000578317 IGKV3D-20A0A0C4DH25 116 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 FAM231BA6NCW3 169 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 M0R036 132 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 ATP6V1G1O75348 118 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 FRMD6-AS1P0C7T7 363 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 RBMY1A1P0DJD3 496 aaKnown RBP5.81□□□□□ -1.48
COPS3-215ENST00000578317 RBMY1CP0DJD4 496 aa5.81□□□□□ -1.48
COPS3-215ENST00000578317 FOXA3P55318 350 aaPredicted RBP5.81□□□□□ -1.48
COPS3-215ENST00000578317 RPS20P60866 119 aaKnown RBP5.81□□□□□ -1.48
COPS3-215ENST00000578317 RBMY1FQ15415 496 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms