RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 OR4C5Q8NGB2 326 aa7.94□□□□□ -1.14
CDH8-202ENST00000577228 NTN5Q8WTR8 489 aaPredicted RBP7.94□□□□□ -1.14
CDH8-202ENST00000577228 NAGKQ9UJ70 344 aa7.94□□□□□ -1.14
CDH8-202ENST00000577228 IGHV3-38A0A0C4DH36 116 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 LOC100131303A0A0U1RQF7 123 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 LRCOL1A6NCL2 159 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 G3V3Q6 166 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 PPT1P50897 306 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 TIRAPP58753 221 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 RANP62826 216 aaKnown RBP7.93□□□□□ -1.14
CDH8-202ENST00000577228 UBE2L3P68036 154 aaKnown RBP7.93□□□□□ -1.14
CDH8-202ENST00000577228 NHLH2Q02577 135 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 NHLRC2Q8NBF2 726 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 OR5C1Q8NGR4 320 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 MBD2Q9UBB5 411 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 LENEPQ9Y5L5 61 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 MYCBP2O75592 4640 aa7.93□□□□□ -1.14
CDH8-202ENST00000577228 J3QL48 77 aa7.92□□□□□ -1.14
CDH8-202ENST00000577228 M0R2P5 195 aa7.92□□□□□ -1.14
CDH8-202ENST00000577228 LINC01556Q5JQF7 62 aa7.92□□□□□ -1.14
CDH8-202ENST00000577228 ASB13Q8WXK3 278 aa7.92□□□□□ -1.14
CDH8-202ENST00000577228 SRRM2Q9UQ35 2752 aaKnown RBP7.92□□□□□ -1.14
CDH8-202ENST00000577228 IGHV3-16A0A0C4DH30 117 aa7.91□□□□□ -1.14
CDH8-202ENST00000577228 DIRC3C9JPN6 131 aa7.91□□□□□ -1.14
CDH8-202ENST00000577228 C17orf112F2Z3M2 114 aa7.91□□□□□ -1.14
CDH8-202ENST00000577228 SMLR1H3BR10 107 aa7.91□□□□□ -1.14
CDH8-202ENST00000577228 TDRG1Q3Y452 100 aa7.91□□□□□ -1.14
CDH8-202ENST00000577228 Q8N814 137 aa7.91□□□□□ -1.14
CDH8-202ENST00000577228 OR2T35Q8NGX2 323 aa7.91□□□□□ -1.14
CDH8-202ENST00000577228 WDR61Q9GZS3 305 aaKnown RBP7.91□□□□□ -1.14
CDH8-202ENST00000577228 Q9HAA7 133 aa7.91□□□□□ -1.14
CDH8-202ENST00000577228 TRAV8-6A0A0B4J262 113 aa7.9□□□□□ -1.14
CDH8-202ENST00000577228 IBA57-AS1B1ANH7 110 aa7.9□□□□□ -1.14
CDH8-202ENST00000577228 GNRH2O43555 120 aa7.9□□□□□ -1.14
CDH8-202ENST00000577228 PET100P0DJ07 73 aa7.9□□□□□ -1.14
CDH8-202ENST00000577228 GATA1P15976 413 aaPredicted RBP7.9□□□□□ -1.14
CDH8-202ENST00000577228 KHDC3LQ587J8 217 aa7.9□□□□□ -1.14
CDH8-202ENST00000577228 TMED6Q8WW62 240 aa7.9□□□□□ -1.14
CDH8-202ENST00000577228 HYLS1Q96M11 299 aa7.9□□□□□ -1.14
CDH8-202ENST00000577228 RPH3ALQ9UNE2 315 aa7.9□□□□□ -1.14
CDH8-202ENST00000577228 TRAV21A0A0B4J279 112 aa7.89□□□□□ -1.15
CDH8-202ENST00000577228 PFN1P07737 140 aaKnown RBP7.89□□□□□ -1.15
CDH8-202ENST00000577228 TAS2R45P59539 299 aa7.89□□□□□ -1.15
CDH8-202ENST00000577228 OR10J3Q5JRS4 329 aa7.89□□□□□ -1.15
CDH8-202ENST00000577228 FFAR4Q5NUL3 377 aa7.89□□□□□ -1.15
CDH8-202ENST00000577228 CMTM2Q8TAZ6 248 aa7.89□□□□□ -1.15
CDH8-202ENST00000577228 ATP5SQ99766 215 aa7.89□□□□□ -1.15
CDH8-202ENST00000577228 OTORQ9NRC9 128 aa7.89□□□□□ -1.15
CDH8-202ENST00000577228 BOLA1Q9Y3E2 137 aa7.89□□□□□ -1.15
CDH8-202ENST00000577228 FBLL1A6NHQ2 334 aaKnown RBP7.88□□□□□ -1.15
CDH8-202ENST00000577228 F6UZH7 168 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 IGHV3-30P01768 117 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 IGHV3-33P01772 117 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 TYMSP04818 313 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 IGHV3-30-3P0DP02 117 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 IGHV3-30-5P0DP03 117 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 RPL12P30050 165 aaKnown RBP7.88□□□□□ -1.15
CDH8-202ENST00000577228 GOLT1AQ6ZVE7 132 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 PRADC1Q9BSG0 188 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 SDF2L1Q9HCN8 221 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 FAM30AQ9NZY2 134 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 HSPB11Q9Y547 144 aa7.88□□□□□ -1.15
CDH8-202ENST00000577228 FXYD6-FXYD2A0A087WZ82 144 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 RNF222A6NCQ9 220 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 PGPA6NDG6 321 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 C1QBP02746 253 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 RHOHQ15669 191 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 FAM74A1Q5RGS3 127 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 SLC25A29Q8N8R3 303 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 OR11H4Q8NGC9 324 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 KCNS1Q96KK3 526 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 WFDC1Q9HC57 220 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 TREM1Q9NP99 234 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 TNFSF18Q9UNG2 199 aa7.87□□□□□ -1.15
CDH8-202ENST00000577228 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDH8-202ENST00000577228 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
CDH8-202ENST00000577228 LELP1Q5T871 98 aa7.86□□□□□ -1.15
CDH8-202ENST00000577228 TCTE3Q8IZS6 198 aa7.86□□□□□ -1.15
CDH8-202ENST00000577228 TVP23CQ96ET8 276 aa7.86□□□□□ -1.15
CDH8-202ENST00000577228 AQP10Q96PS8 301 aa7.86□□□□□ -1.15
CDH8-202ENST00000577228 TM2D2Q9BX73 214 aa7.86□□□□□ -1.15
CDH8-202ENST00000577228 SMIM3Q9BZL3 60 aa7.86□□□□□ -1.15
CDH8-202ENST00000577228 TRAV8-1A0A0A6YYK1 113 aa7.85□□□□□ -1.15
CDH8-202ENST00000577228 TRBV6-4A0A1B0GX49 114 aa7.85□□□□□ -1.15
CDH8-202ENST00000577228 RS1O15537 224 aa7.85□□□□□ -1.15
CDH8-202ENST00000577228 CIDEAO60543 219 aa7.85□□□□□ -1.15
CDH8-202ENST00000577228 LAGE3Q14657 143 aa7.85□□□□□ -1.15
CDH8-202ENST00000577228 ZNF876PQ49A33 203 aa7.85□□□□□ -1.15
CDH8-202ENST00000577228 CFAP126Q5VTH2 177 aa7.85□□□□□ -1.15
CDH8-202ENST00000577228 AKAP14Q86UN6 197 aa7.85□□□□□ -1.15
CDH8-202ENST00000577228 SCGB1C1Q8TD33 95 aa7.85□□□□□ -1.15
CDH8-202ENST00000577228 IGHV3-73A0A0B4J1V6 119 aa7.84□□□□□ -1.15
CDH8-202ENST00000577228 ARPC5O15511 151 aa7.84□□□□□ -1.15
CDH8-202ENST00000577228 GNG5P63218 68 aa7.84□□□□□ -1.15
CDH8-202ENST00000577228 WFDC2Q14508 124 aa7.84□□□□□ -1.15
CDH8-202ENST00000577228 DPPA3Q6W0C5 159 aa7.84□□□□□ -1.15
CDH8-202ENST00000577228 PQLC2Q6ZP29 291 aa7.84□□□□□ -1.15
CDH8-202ENST00000577228 Q6ZSA8 131 aa7.84□□□□□ -1.15
CDH8-202ENST00000577228 LINC00528Q8N1L1 170 aa7.84□□□□□ -1.15
CDH8-202ENST00000577228 ARL6IP6Q8N6S5 226 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms