RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 PXT1Q8NFP0 134 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 OR52R1Q8NGF1 315 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 OR4X2Q8NGF9 303 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 OR51A2Q8NGJ7 313 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 CDC26Q8NHZ8 85 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 MRPS24Q96EL2 167 aaKnown RBP0.71□□□□□ -2.3
CDC27-218ENST00000575830 COX14Q96I36 57 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 UQCC1Q9NVA1 299 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 ARMC1Q9NVT9 282 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 DOK5Q9P104 306 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 CYSLTR1Q9Y271 337 aa0.71□□□□□ -2.3
CDC27-218ENST00000575830 IGKV1-9A0A0C4DH69 117 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 MEIS3P1A6NDR6 274 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 PDE6DO43924 150 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 CREBL2O60519 120 aaPredicted RBP0.7□□□□□ -2.3
CDC27-218ENST00000575830 ZNF737O75373 536 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 SERPINA1P01009 418 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 PPBPP02775 128 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 CTSDP07339 412 aaPredicted RBP0.7□□□□□ -2.3
CDC27-218ENST00000575830 RBP1P09455 135 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 DEFA1P59665 94 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 GLO1Q04760 184 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 DEFB110Q30KQ9 67 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 LINC01554Q52M75 96 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 SPANXN3Q5MJ09 141 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 SCIMPQ6UWF3 145 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 LINC00322Q6ZN03 302 aaPredicted RBP0.7□□□□□ -2.3
CDC27-218ENST00000575830 SLC36A1Q7Z2H8 476 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 S100A7AQ86SG5 101 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 DHFR2Q86XF0 187 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 OR11H6Q8NGC7 330 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 ZNF563Q8TA94 476 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 ACOT12Q8WYK0 555 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 DGCR14Q96DF8 476 aaKnown RBP0.7□□□□□ -2.3
CDC27-218ENST00000575830 ADAT3Q96EY9 351 aaPredicted RBP0.7□□□□□ -2.3
CDC27-218ENST00000575830 SIGMAR1Q99720 223 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 NAT8Q9UHE5 227 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 TIMM9Q9Y5J7 89 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 ARL5AQ9Y689 179 aa0.7□□□□□ -2.3
CDC27-218ENST00000575830 TRAV9-1A0A075B6T8 112 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 TMEM238C9JI98 176 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 J3QQQ9 107 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 IFNA10P01566 189 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 ANGP03950 147 aaKnown RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 C8GP07360 202 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 ZNF705BP0CI00 300 aaPredicted RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 RPS4Y1P22090 263 aaKnown RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 NFYAP23511 347 aaPredicted RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 SRIP30626 198 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 S100A5P33763 92 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 RNASE4P34096 147 aaKnown RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 RPL26P61254 145 aaKnown RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 HSPE1P61604 102 aaKnown RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 ERHP84090 104 aaKnown RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 CIRBPQ14011 172 aaKnown RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 NNATQ16517 81 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 Q1T7F1 81 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 LIN52Q52LA3 116 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 Q6Q795 121 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 Q6ZQT0 140 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 ZNF826PQ6ZT77 177 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 LCA10Q71F78 164 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 KRT222Q8N1A0 295 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 C11orf40Q8WZ69 217 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 C2orf50Q96LR7 162 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 PRRT1Q99946 306 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 CMSS1Q9BQ75 279 aaKnown RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 TMEM70Q9BUB7 260 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 COMMD5Q9GZQ3 224 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 FAM96AQ9H5X1 160 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 NMNAT1Q9HAN9 279 aaPredicted RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 PROK2Q9HC23 129 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 RPL26L1Q9UNX3 145 aaKnown RBP0.69□□□□□ -2.3
CDC27-218ENST00000575830 BAIAP2Q9UQB8 552 aa0.69□□□□□ -2.3
CDC27-218ENST00000575830 TRBV19A0A075B6N1 114 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 TCRBV4S1A1TA0A5B7 111 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 TRAPPC13A5PLN9 417 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 HMSDA8MTL9 139 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 SLC22A1O15245 554 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 CRYZL1O95825 349 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 GPX2P18283 190 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 SPRR2EP22531 72 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 PPIBP23284 216 aaKnown RBP0.68□□□□□ -2.3
CDC27-218ENST00000575830 SPRR2BP35325 72 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 SPRR2AP35326 72 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 HINT1P49773 126 aaPredicted RBP0.68□□□□□ -2.3
CDC27-218ENST00000575830 INSL3P51460 131 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 TMEM258P61165 79 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 TFAMQ00059 246 aaKnown RBP0.68□□□□□ -2.3
CDC27-218ENST00000575830 SLC38A11Q08AI6 406 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 ZNF345Q14585 488 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 ARHGAP11BQ3KRB8 267 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 KRTAP19-2Q3LHN2 52 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 TMEM155Q4W5P6 130 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 GOLT1AQ6ZVE7 132 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 MIR17HGQ75NE6 70 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 LRRC28Q86X40 367 aaPredicted RBP0.68□□□□□ -2.3
CDC27-218ENST00000575830 C12orf29Q8N999 325 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 OR4E2Q8NGC2 313 aa0.68□□□□□ -2.3
CDC27-218ENST00000575830 SCGB3A1Q96QR1 104 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms