RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C9orf85Q96MD7 179 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 LINC00588Q9Y4M8 146 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 HSPG2P98160 4391 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 TRAV26-1A0A087WT03 109 aa6□□□□□ -1.45
SMG6-216ENST00000575176 TRGV1A0A0A0MS02 117 aa6□□□□□ -1.45
SMG6-216ENST00000575176 IGKV3D-20A0A0C4DH25 116 aa6□□□□□ -1.45
SMG6-216ENST00000575176 TRBV6-1A0A0K0K1D8 114 aa6□□□□□ -1.45
SMG6-216ENST00000575176 F5H768 121 aa6□□□□□ -1.45
SMG6-216ENST00000575176 H3BNG1 76 aa6□□□□□ -1.45
SMG6-216ENST00000575176 RGS13O14921 159 aa6□□□□□ -1.45
SMG6-216ENST00000575176 GNRH2O43555 120 aa6□□□□□ -1.45
SMG6-216ENST00000575176 RNASE3P12724 160 aaKnown RBP6□□□□□ -1.45
SMG6-216ENST00000575176 ZNF415Q09FC8 603 aa6□□□□□ -1.45
SMG6-216ENST00000575176 FHL2Q14192 279 aa6□□□□□ -1.45
SMG6-216ENST00000575176 TMEM183BQ1AE95 376 aa6□□□□□ -1.45
SMG6-216ENST00000575176 RNF212Q495C1 297 aa6□□□□□ -1.45
SMG6-216ENST00000575176 FAM74A1Q5RGS3 127 aa6□□□□□ -1.45
SMG6-216ENST00000575176 AKR1C8PQ5T2L2 129 aa6□□□□□ -1.45
SMG6-216ENST00000575176 DPPA3Q6W0C5 159 aa6□□□□□ -1.45
SMG6-216ENST00000575176 TMEM183AQ8IXX5 376 aa6□□□□□ -1.45
SMG6-216ENST00000575176 CMTM2Q8TAZ6 248 aa6□□□□□ -1.45
SMG6-216ENST00000575176 RASL10AQ92737 203 aa6□□□□□ -1.45
SMG6-216ENST00000575176 ZC2HC1AQ96GY0 325 aa6□□□□□ -1.45
SMG6-216ENST00000575176 ZNF471Q9BX82 626 aaPredicted RBP6□□□□□ -1.45
SMG6-216ENST00000575176 TREM1Q9NP99 234 aa6□□□□□ -1.45
SMG6-216ENST00000575176 A0A096LPF7 62 aa5.99□□□□□ -1.45
SMG6-216ENST00000575176 TRAV21A0A0B4J279 112 aa5.99□□□□□ -1.45
SMG6-216ENST00000575176 KANTRA0A1W2PQU2 76 aa5.99□□□□□ -1.45
SMG6-216ENST00000575176 UMAD1C9J7I0 102 aa5.99□□□□□ -1.45
SMG6-216ENST00000575176 GCGP01275 180 aa5.99□□□□□ -1.45
SMG6-216ENST00000575176 LTAP01374 205 aa5.99□□□□□ -1.45
SMG6-216ENST00000575176 PFN1P07737 140 aaKnown RBP5.99□□□□□ -1.45
SMG6-216ENST00000575176 CCL20P78556 96 aa5.99□□□□□ -1.45
SMG6-216ENST00000575176 FAM213BQ8TBF2 198 aa5.99□□□□□ -1.45
SMG6-216ENST00000575176 ZNF479Q96JC4 524 aa5.99□□□□□ -1.45
SMG6-216ENST00000575176 TRAV1-1A0A0B4J248 108 aa5.98□□□□□ -1.45
SMG6-216ENST00000575176 A0A0J9YY99 117 aa5.98□□□□□ -1.45
SMG6-216ENST00000575176 TPT1P13693 172 aaKnown RBP5.98□□□□□ -1.45
SMG6-216ENST00000575176 PRNTQ86SH4 94 aa5.98□□□□□ -1.45
SMG6-216ENST00000575176 HIST1H2BAQ96A08 127 aa5.98□□□□□ -1.45
SMG6-216ENST00000575176 C11orf52Q96A22 123 aa5.98□□□□□ -1.45
SMG6-216ENST00000575176 UPK3BQ9BT76 320 aa5.98□□□□□ -1.45
SMG6-216ENST00000575176 MLST8Q9BVC4 326 aa5.98□□□□□ -1.45
SMG6-216ENST00000575176 hCG_2014768A0A024R1R8 64 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 TRGV11A0A075B6L2 103 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 SCO2A0A1W2PP80 73 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 FBLL1A6NHQ2 334 aaKnown RBP5.97□□□□□ -1.45
SMG6-216ENST00000575176 PAGE4O60829 102 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 IGHV3-53P01767 116 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 SFTA3P0C7M3 94 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 LINC00694P0DN24 101 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 SULT1A2P50226 295 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 CRYBA4P53673 196 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 ESRGQ1W209 222 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 DNLZQ5SXM8 178 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 UFSP1Q6NVU6 142 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 IQCF2Q8IXL9 164 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 TCEAL7Q9BRU2 100 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 NAGKQ9UJ70 344 aa5.97□□□□□ -1.45
SMG6-216ENST00000575176 TRBV20OR9-2A0A075B6H5 130 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 IGLV2-18A0A075B6J9 118 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 TRGV2A0A075B6R0 118 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 TRAV4A0A0B4J268 109 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 A0A1B0GV50 99 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 IGLV2-8P01709 118 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 FAM3BP58499 235 aaPredicted RBP5.96□□□□□ -1.46
SMG6-216ENST00000575176 ZNF674Q2M3X9 581 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 SMUG1Q53HV7 270 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 ZNF506Q5JVG8 444 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 FAM159AQ6UWV7 190 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 AKAP14Q86UN6 197 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 SFT2D1Q8WV19 159 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 PTH2Q96A98 100 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 FMC1Q96HJ9 113 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 SPXQ9BT56 116 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 DERL1Q9BUN8 251 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 NKX6-2Q9C056 277 aaPredicted RBP5.96□□□□□ -1.46
SMG6-216ENST00000575176 SCRT2Q9NQ03 307 aa5.96□□□□□ -1.46
SMG6-216ENST00000575176 MRPS16Q9Y3D3 137 aaKnown RBP5.96□□□□□ -1.46
SMG6-216ENST00000575176 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 PCLOQ9Y6V0 5065 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 LOC100131303A0A0U1RQF7 123 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 PGPEP1LA6NFU8 196 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 KRBOX1C9JBD0 128 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 M0R2P5 195 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 SH2D1AO60880 128 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 PFDN1O60925 122 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 NUDT3O95989 172 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 GATA1P15976 413 aaPredicted RBP5.95□□□□□ -1.46
SMG6-216ENST00000575176 OR5I1Q13606 314 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 LINC01559Q495D7 138 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 SAPCD1Q5SSQ6 148 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 CFAP126Q5VTH2 177 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 SLC51BQ86UW2 128 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 SDF2L1Q9HCN8 221 aa5.95□□□□□ -1.46
SMG6-216ENST00000575176 NBDYA0A0U1RRE5 68 aa5.94□□□□□ -1.46
SMG6-216ENST00000575176 K7EQD1 137 aa5.94□□□□□ -1.46
SMG6-216ENST00000575176 K7EQM0 130 aa5.94□□□□□ -1.46
SMG6-216ENST00000575176 M0R2N4 97 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms