RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 ANXA2RQ3ZCQ2 193 aa8.4□□□□□ -1.06
CCDC40-210ENST00000573903 ZFAND2AQ8N6M9 145 aa8.4□□□□□ -1.06
CCDC40-210ENST00000573903 LINC00467Q9BRT7 94 aa8.4□□□□□ -1.06
CCDC40-210ENST00000573903 NDFIP1Q9BT67 221 aa8.4□□□□□ -1.06
CCDC40-210ENST00000573903 HSPG2P98160 4391 aa8.4□□□□□ -1.06
CCDC40-210ENST00000573903 A0A1W2PRE2 83 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 GGTLC3B5MD39 225 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 PAX4O43316 350 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 FGF8P55075 233 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-210ENST00000573903 TCL1AP56279 114 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 KRTAP10-2P60368 255 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 ERVFC1-1P60608 527 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 GNG5P63218 68 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 SLAQ13239 276 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 IBA57Q5T440 356 aaKnown RBP8.39□□□□□ -1.07
CCDC40-210ENST00000573903 EIF5AL1Q6IS14 154 aaKnown RBP8.39□□□□□ -1.07
CCDC40-210ENST00000573903 DPPA3Q6W0C5 159 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 C11orf72Q8NBR9 251 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 VSIG2Q96IQ7 327 aa8.39□□□□□ -1.07
CCDC40-210ENST00000573903 FBLL1A6NHQ2 334 aaKnown RBP8.38□□□□□ -1.07
CCDC40-210ENST00000573903 SPINK4O60575 86 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 ZNF324O75467 553 aaPredicted RBP8.38□□□□□ -1.07
CCDC40-210ENST00000573903 NXPH4O95158 308 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 TCRAP04437 139 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 CD300CQ08708 224 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 PRR9Q5T870 116 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 CYB561D1Q8N8Q1 229 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 FAM213BQ8TBF2 198 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 NKX6-2Q9C056 277 aaPredicted RBP8.38□□□□□ -1.07
CCDC40-210ENST00000573903 PRO0255Q9UI72 69 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 KLF12Q9Y4X4 402 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 ABCA13Q86UQ4 5058 aa8.38□□□□□ -1.07
CCDC40-210ENST00000573903 IFNA7P01567 189 aa8.37□□□□□ -1.07
CCDC40-210ENST00000573903 IGHV3-53P01767 116 aa8.37□□□□□ -1.07
CCDC40-210ENST00000573903 UBE2G2P60604 165 aa8.37□□□□□ -1.07
CCDC40-210ENST00000573903 SUMO1P63165 101 aaKnown RBP8.37□□□□□ -1.07
CCDC40-210ENST00000573903 ZNF415Q09FC8 603 aa8.37□□□□□ -1.07
CCDC40-210ENST00000573903 ZFP69Q49AA0 526 aa8.37□□□□□ -1.07
CCDC40-210ENST00000573903 NFE4Q86UQ8 179 aa8.37□□□□□ -1.07
CCDC40-210ENST00000573903 MRPL16Q9NX20 251 aaKnown RBP8.37□□□□□ -1.07
CCDC40-210ENST00000573903 PGPEP1Q9NXJ5 209 aa8.37□□□□□ -1.07
CCDC40-210ENST00000573903 ARL2-SNX15V9GYD0 113 aa8.37□□□□□ -1.07
CCDC40-210ENST00000573903 IGHV1OR15-1A0A075B7D0 117 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 TRAV9-2A0A087WT02 112 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 TRAV8-1A0A0A6YYK1 113 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 FHITP49789 147 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 PPT1P50897 306 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
CCDC40-210ENST00000573903 LGALSLQ3ZCW2 172 aaPredicted RBP8.36□□□□□ -1.07
CCDC40-210ENST00000573903 Q6AWC8 147 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 CDPF1Q6NVV7 123 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 SLC51BQ86UW2 128 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 TMEM75Q8N9X5 138 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 TCEAL7Q9BRU2 100 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 TREM1Q9NP99 234 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 EPDR1Q9UM22 224 aa8.36□□□□□ -1.07
CCDC40-210ENST00000573903 FAM74A7A6NL05 159 aa8.35□□□□□ -1.07
CCDC40-210ENST00000573903 EPM2AB3EWF7 344 aa8.35□□□□□ -1.07
CCDC40-210ENST00000573903 PEX7O00628 323 aa8.35□□□□□ -1.07
CCDC40-210ENST00000573903 RAB5CP51148 216 aa8.35□□□□□ -1.07
CCDC40-210ENST00000573903 FLI1Q01543 452 aaPredicted RBP8.35□□□□□ -1.07
CCDC40-210ENST00000573903 SFT2D1Q8WV19 159 aa8.35□□□□□ -1.07
CCDC40-210ENST00000573903 PCNPQ8WW12 178 aaKnown RBP8.35□□□□□ -1.07
CCDC40-210ENST00000573903 HIST1H2BAQ96A08 127 aa8.35□□□□□ -1.07
CCDC40-210ENST00000573903 HHLA3Q9XRX5 114 aa8.35□□□□□ -1.07
CCDC40-210ENST00000573903 LRP1BQ9NZR2 4599 aa8.35□□□□□ -1.07
CCDC40-210ENST00000573903 TRGV11A0A075B6L2 103 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 TRAV21A0A0B4J279 112 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 TRGV4A0A0C4DH28 118 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 F6UZH7 168 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 TEX46H3BTG2 121 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 CRYBA4P53673 196 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 FAM159AQ6UWV7 190 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 Q6ZRN7 208 aaPredicted RBP8.34□□□□□ -1.07
CCDC40-210ENST00000573903 NEGR1Q7Z3B1 354 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 MBD3L1Q8WWY6 194 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 C8orf49Q96NF6 230 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 NAGKQ9UJ70 344 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 TP53TG3Q9ULZ0 132 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 PSG8Q9UQ74 426 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 LY96Q9Y6Y9 160 aa8.34□□□□□ -1.07
CCDC40-210ENST00000573903 A0A1B0GV50 99 aa8.33□□□□□ -1.08
CCDC40-210ENST00000573903 SRIP30626 198 aa8.33□□□□□ -1.08
CCDC40-210ENST00000573903 MUC21Q5SSG8 566 aa8.33□□□□□ -1.08
CCDC40-210ENST00000573903 SAPCD1Q5SSQ6 148 aa8.33□□□□□ -1.08
CCDC40-210ENST00000573903 CST9LP1Q5W188 147 aa8.33□□□□□ -1.08
CCDC40-210ENST00000573903 PRNTQ86SH4 94 aa8.33□□□□□ -1.08
CCDC40-210ENST00000573903 C9orf62Q8N4C0 152 aa8.33□□□□□ -1.08
CCDC40-210ENST00000573903 SGK494Q96LW2 274 aa8.33□□□□□ -1.08
CCDC40-210ENST00000573903 K7EP13 123 aa8.32□□□□□ -1.08
CCDC40-210ENST00000573903 EVI2AP22794 236 aa8.32□□□□□ -1.08
CCDC40-210ENST00000573903 UBE2G1P62253 170 aa8.32□□□□□ -1.08
CCDC40-210ENST00000573903 FHL2Q14192 279 aa8.32□□□□□ -1.08
CCDC40-210ENST00000573903 SMUG1Q53HV7 270 aa8.32□□□□□ -1.08
CCDC40-210ENST00000573903 LYPD5Q6UWN5 251 aa8.32□□□□□ -1.08
CCDC40-210ENST00000573903 Q86TA4 180 aa8.32□□□□□ -1.08
CCDC40-210ENST00000573903 PAGE4O60829 102 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 GCGP01275 180 aa8.31□□□□□ -1.08
CCDC40-210ENST00000573903 IGLV2-11P01706 119 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms