RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 Q6ZTC4 211 aa9.66□□□□□ -0.86
RPAIN-213ENST00000573577 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
RPAIN-213ENST00000573577 NAGKQ9UJ70 344 aa9.66□□□□□ -0.86
RPAIN-213ENST00000573577 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
RPAIN-213ENST00000573577 TRAV10A0A0B4J240 114 aa9.65□□□□□ -0.86
RPAIN-213ENST00000573577 LTAP01374 205 aa9.65□□□□□ -0.86
RPAIN-213ENST00000573577 C12orf74Q32Q52 190 aa9.65□□□□□ -0.86
RPAIN-213ENST00000573577 TDRG1Q3Y452 100 aa9.65□□□□□ -0.86
RPAIN-213ENST00000573577 MUC21Q5SSG8 566 aa9.65□□□□□ -0.86
RPAIN-213ENST00000573577 LINC00476Q8WZB0 136 aa9.65□□□□□ -0.86
RPAIN-213ENST00000573577 C11orf52Q96A22 123 aa9.65□□□□□ -0.86
RPAIN-213ENST00000573577 SDF2L1Q9HCN8 221 aa9.65□□□□□ -0.86
RPAIN-213ENST00000573577 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
RPAIN-213ENST00000573577 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
RPAIN-213ENST00000573577 FABP5P3A8MUU1 101 aa9.64□□□□□ -0.87
RPAIN-213ENST00000573577 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
RPAIN-213ENST00000573577 DAZ2Q13117 558 aaKnown RBP9.64□□□□□ -0.87
RPAIN-213ENST00000573577 Q6ZQT7 251 aa9.64□□□□□ -0.87
RPAIN-213ENST00000573577 ZNF767PQ75MW2 155 aa9.64□□□□□ -0.87
RPAIN-213ENST00000573577 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
RPAIN-213ENST00000573577 TMEM183AQ8IXX5 376 aa9.64□□□□□ -0.87
RPAIN-213ENST00000573577 DEFB130BP0DP73 79 aa9.63□□□□□ -0.87
RPAIN-213ENST00000573577 DEFB130AP0DP74 79 aa9.63□□□□□ -0.87
RPAIN-213ENST00000573577 RPL35P42766 123 aaKnown RBP9.63□□□□□ -0.87
RPAIN-213ENST00000573577 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-213ENST00000573577 TCL1AP56279 114 aa9.63□□□□□ -0.87
RPAIN-213ENST00000573577 BAGE2Q86Y30 109 aa9.63□□□□□ -0.87
RPAIN-213ENST00000573577 C11orf72Q8NBR9 251 aa9.63□□□□□ -0.87
RPAIN-213ENST00000573577 GSN-AS1Q9NRJ2 163 aa9.63□□□□□ -0.87
RPAIN-213ENST00000573577 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
RPAIN-213ENST00000573577 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
RPAIN-213ENST00000573577 TCTAP57738 103 aa9.62□□□□□ -0.87
RPAIN-213ENST00000573577 FAM162BQ5T6X4 162 aa9.62□□□□□ -0.87
RPAIN-213ENST00000573577 MED9Q9NWA0 146 aa9.62□□□□□ -0.87
RPAIN-213ENST00000573577 TP53TG3Q9ULZ0 132 aa9.62□□□□□ -0.87
RPAIN-213ENST00000573577 IGLL5B9A064 214 aa9.61□□□□□ -0.87
RPAIN-213ENST00000573577 LY6G6CO95867 125 aa9.61□□□□□ -0.87
RPAIN-213ENST00000573577 LGALS9BQ3B8N2 356 aa9.61□□□□□ -0.87
RPAIN-213ENST00000573577 ZNF506Q5JVG8 444 aa9.61□□□□□ -0.87
RPAIN-213ENST00000573577 ZC2HC1AQ96GY0 325 aa9.61□□□□□ -0.87
RPAIN-213ENST00000573577 SPXQ9BT56 116 aa9.61□□□□□ -0.87
RPAIN-213ENST00000573577 EIF5A2Q9GZV4 153 aaKnown RBP9.61□□□□□ -0.87
RPAIN-213ENST00000573577 TRGV1A0A0A0MS02 117 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 TMEM250H0YL14 139 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 NDUFS6O75380 124 aaKnown RBP9.6□□□□□ -0.87
RPAIN-213ENST00000573577 TYMSP04818 313 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 ATP5G1P05496 136 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 GNG4P50150 75 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 ZNF674Q2M3X9 581 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 TOR2AQ5JU69 321 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 LINC00612Q8N6U2 182 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 SMIM12Q96EX1 92 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 FAM210AQ96ND0 272 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 DERL1Q9BUN8 251 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 MDFICQ9P1T7 246 aa9.6□□□□□ -0.87
RPAIN-213ENST00000573577 TRGV2A0A075B6R0 118 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 IGHV3-16A0A0C4DH30 117 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 GAGE12BA1L429 117 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 GNRH2O43555 120 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 SPINK4O60575 86 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 SH2D1AO60880 128 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 GAGE7O76087 117 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 ORM1P02763 201 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 HTN3P15516 51 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 CENPWQ5EE01 88 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 NHLRC2Q8NBF2 726 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 APLNQ9ULZ1 77 aa9.59□□□□□ -0.87
RPAIN-213ENST00000573577 IGHV4-4A0A075B6R2 117 aa9.58□□□□□ -0.88
RPAIN-213ENST00000573577 B4DEV8 164 aa9.58□□□□□ -0.88
RPAIN-213ENST00000573577 CRIP1P50238 77 aa9.58□□□□□ -0.88
RPAIN-213ENST00000573577 RAB14P61106 215 aa9.58□□□□□ -0.88
RPAIN-213ENST00000573577 LGALS9CQ6DKI2 356 aa9.58□□□□□ -0.88
RPAIN-213ENST00000573577 Q6ZTI0 123 aa9.58□□□□□ -0.88
RPAIN-213ENST00000573577 FAM210BQ96KR6 192 aa9.58□□□□□ -0.88
RPAIN-213ENST00000573577 C18orf15Q96N68 181 aa9.58□□□□□ -0.88
RPAIN-213ENST00000573577 BIN3Q9NQY0 253 aa9.58□□□□□ -0.88
RPAIN-213ENST00000573577 IGKV3D-20A0A0C4DH25 116 aa9.57□□□□□ -0.88
RPAIN-213ENST00000573577 M0R2P5 195 aa9.57□□□□□ -0.88
RPAIN-213ENST00000573577 S100A4P26447 101 aaKnown RBP9.57□□□□□ -0.88
RPAIN-213ENST00000573577 ASIPP42127 132 aa9.57□□□□□ -0.88
RPAIN-213ENST00000573577 PCNPQ8WW12 178 aaKnown RBP9.57□□□□□ -0.88
RPAIN-213ENST00000573577 RAB19A4D1S5 217 aa9.56□□□□□ -0.88
RPAIN-213ENST00000573577 F5H768 121 aa9.56□□□□□ -0.88
RPAIN-213ENST00000573577 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
RPAIN-213ENST00000573577 OR5I1Q13606 314 aa9.56□□□□□ -0.88
RPAIN-213ENST00000573577 PRR27Q6MZM9 219 aa9.56□□□□□ -0.88
RPAIN-213ENST00000573577 RASL10AQ92737 203 aa9.56□□□□□ -0.88
RPAIN-213ENST00000573577 DAZAP1Q96EP5 407 aaKnown RBP9.56□□□□□ -0.88
RPAIN-213ENST00000573577 NDUFAF3Q9BU61 184 aa9.56□□□□□ -0.88
RPAIN-213ENST00000573577 MRPL16Q9NX20 251 aaKnown RBP9.56□□□□□ -0.88
RPAIN-213ENST00000573577 VPS13DQ5THJ4 4388 aa9.55□□□□□ -0.88
RPAIN-213ENST00000573577 KRBOX1C9JBD0 128 aa9.55□□□□□ -0.88
RPAIN-213ENST00000573577 C9JCJ5 164 aa9.55□□□□□ -0.88
RPAIN-213ENST00000573577 M0R036 132 aa9.55□□□□□ -0.88
RPAIN-213ENST00000573577 CEBPGP53567 150 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms