RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 CCL25O15444 150 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 ATP5G1P05496 136 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 GAGE5Q13069 117 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 GAGE6Q13070 117 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 C16orf54Q6UWD8 224 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 DYNAPQ8N1N2 210 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 NCOR1O75376 2440 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 CENPVL3A0A0U1RRI6 287 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 IGLV2-14P01704 120 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 CARD19Q96LW7 228 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 SPRY4Q9C004 299 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 ZNRD1Q9P1U0 126 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 PLXND1Q9Y4D7 1925 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 SH2D6Q7Z4S9 175 aa9.7□□□□□ -0.86
PCDHGA9-201ENST00000573521 SHANK1Q9Y566 2161 aa9.69□□□□□ -0.86
PCDHGA9-201ENST00000573521 A0A0U1RRA0 63 aa9.69□□□□□ -0.86
PCDHGA9-201ENST00000573521 BUB3O43684 328 aa9.69□□□□□ -0.86
PCDHGA9-201ENST00000573521 IGLV1-47P01700 117 aa9.69□□□□□ -0.86
PCDHGA9-201ENST00000573521 SPINK13Q1W4C9 94 aa9.69□□□□□ -0.86
PCDHGA9-201ENST00000573521 TCTEX1D4Q5JR98 221 aa9.69□□□□□ -0.86
PCDHGA9-201ENST00000573521 SPAG8Q99932 426 aaPredicted RBP9.69□□□□□ -0.86
PCDHGA9-201ENST00000573521 CTSZQ9UBR2 303 aa9.69□□□□□ -0.86
PCDHGA9-201ENST00000573521 G3V318 75 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 FBXL19-AS1Q494R0 122 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 DKK4Q9UBT3 224 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 DENND4AQ7Z401 1863 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 DOCK9Q9BZ29 2069 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 WNK2Q9Y3S1 2297 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 TEX48A0A1B0GUV7 120 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 DUX4L9Q6RFH8 374 aaPredicted RBP9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 INTS1Q8N201 2190 aaKnown RBP9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 A0A1W2PRX2 142 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 C11orf86A6NJI1 115 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 CRYBA4P53673 196 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 SLC25A29Q8N8R3 303 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 TOMM6Q96B49 74 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 CGB3P0DN86 165 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 CGB7P0DN87 165 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 HTN3P15516 51 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 HOXB4P17483 251 aaPredicted RBP9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 RMI2Q96E14 147 aa9.68□□□□□ -0.86
PCDHGA9-201ENST00000573521 COL4A3Q01955 1670 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 IGHV3-73A0A0B4J1V6 119 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 TRACP01848 142 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 CTSGP08311 255 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 APOC4P55056 127 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 CFHR4Q92496 578 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 DENND4CQ5VZ89 1909 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 TAX1BP3O14907 124 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 IGLV2-23P01705 113 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 ODF3Q96PU9 254 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 TRAV25A0A0B4J276 109 aa9.67□□□□□ -0.86
PCDHGA9-201ENST00000573521 CNOT1A5YKK6 2376 aaKnown RBP9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 CHD7Q9P2D1 2997 aa9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 DAZ2Q13117 558 aaKnown RBP9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 DAZ4Q86SG3 579 aaKnown RBP9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 YPEL4Q96NS1 127 aa9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 DAZ3Q9NR90 486 aaKnown RBP9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 IGHV7-81A0A0B4J1V7 117 aa9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 NUPR1O60356 82 aa9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 TMEM126AQ9H061 195 aa9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 ANKRD39Q53RE8 183 aa9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 ZNRF2Q8NHG8 242 aa9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 GTSF1Q8WW33 167 aa9.66□□□□□ -0.86
PCDHGA9-201ENST00000573521 TEX22C9J3V5 150 aa9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 GNLYP22749 145 aa9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 RBMY1FQ15415 496 aaKnown RBP9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 MYO7BQ6PIF6 2116 aa9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 UNQ6494/PRO21346Q6UXR6 183 aa9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 PCP2Q8IVA1 136 aa9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 ZNF407Q9C0G0 2248 aa9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 C2orf70A6NJV1 201 aa9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 ZFP2Q6ZN57 461 aa9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 ODF3L1Q8IXM7 274 aa9.65□□□□□ -0.86
PCDHGA9-201ENST00000573521 C15orf53Q8NAA6 179 aa9.65□□□□□ -0.87
PCDHGA9-201ENST00000573521 NTN5Q8WTR8 489 aaPredicted RBP9.65□□□□□ -0.87
PCDHGA9-201ENST00000573521 ATOX1O00244 68 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 NBL1P41271 181 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 NPC2P61916 151 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 CDPF1Q6NVV7 123 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 WFDC12Q8WWY7 111 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 MBD6Q96DN6 1003 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 DSCR8Q96T75 97 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 TNRC6AQ8NDV7 1962 aaKnown RBP9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 DIAPH2-AS1Q14236 149 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 GPHB5Q86YW7 130 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 SPTBN1Q01082 2364 aaKnown RBP9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 TRAV26-2A0A0B4J265 109 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 MLST8Q9BVC4 326 aa9.64□□□□□ -0.87
PCDHGA9-201ENST00000573521 FER1L5A0AVI2 2057 aa9.63□□□□□ -0.87
PCDHGA9-201ENST00000573521 ZNF561-AS1K7EIQ3 104 aa9.63□□□□□ -0.87
PCDHGA9-201ENST00000573521 VPREB3Q9UKI3 123 aa9.63□□□□□ -0.87
PCDHGA9-201ENST00000573521 EIF4EBP1Q13541 118 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA9-201ENST00000573521 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
PCDHGA9-201ENST00000573521 CXCL5P42830 114 aa9.63□□□□□ -0.87
PCDHGA9-201ENST00000573521 ODF1Q14990 250 aa9.63□□□□□ -0.87
PCDHGA9-201ENST00000573521 PDE6GP18545 87 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms