RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 PRO0255Q9UI72 69 aa8.78□□□□□ -1
NPLOC4-213ENST00000573519 PSG8Q9UQ74 426 aa8.78□□□□□ -1
NPLOC4-213ENST00000573519 HHLA3Q9XRX5 114 aa8.78□□□□□ -1
NPLOC4-213ENST00000573519 PKD1P98161 4303 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 TRAV34A0A0B4J273 112 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 A0A0D9SG52 128 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 KANTRA0A1W2PQU2 76 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 A0A1W2PRE2 83 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 MAP1LC3B2A6NCE7 125 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 K7EQM0 130 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 BCL2L11O43521 198 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 GNRH2O43555 120 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 IGLV2-11P01706 119 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 SFTA3P0C7M3 94 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 SLAQ13239 276 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 FHL2Q14192 279 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 TMUB2Q71RG4 321 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 LINC00479Q96M42 142 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 SPXQ9BT56 116 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 MAP1LC3BQ9GZQ8 125 aa8.77□□□□□ -1.01
NPLOC4-213ENST00000573519 A0A1B0GV50 99 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 SERTM2A0A1B0GWG4 89 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 IFNA7P01567 189 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 ZNF80P51504 273 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 CRYBA4P53673 196 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 Q6ZNX1 250 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 ZNF575Q86XF7 245 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 CYB561D1Q8N8Q1 229 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 FAM213BQ8TBF2 198 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 ZNF479Q96JC4 524 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 KRTAP1-5Q9BYS1 174 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 SDF2L1Q9HCN8 221 aa8.76□□□□□ -1.01
NPLOC4-213ENST00000573519 IGHV3-16A0A0C4DH30 117 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 FAM74A7A6NL05 159 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 PFDN1O60925 122 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 TYMSP04818 313 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 MED14OSP0DP75 135 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 FLI1Q01543 452 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 TDRG1Q3Y452 100 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 ZFP69Q49AA0 526 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 PCNPQ8WW12 178 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 RASL10AQ92737 203 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 KCNS1Q96KK3 526 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 HERC2O95714 4834 aa8.75□□□□□ -1.01
NPLOC4-213ENST00000573519 hCG_2014768A0A024R1R8 64 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 M0R2P5 195 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 PEX7O00628 323 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 NXPH4O95158 308 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 GCGP01275 180 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 SEC11BP0C7V7 166 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 MRPL23Q16540 153 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 TMEM75Q8N9X5 138 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 OR4C5Q8NGB2 326 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 SFT2D1Q8WV19 159 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 C11orf21Q9P2W6 132 aa8.74□□□□□ -1.01
NPLOC4-213ENST00000573519 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 A0A1W2PPQ1 181 aa8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 C9JCJ5 164 aa8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 SIVA1O15304 175 aa8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 SRIP30626 198 aa8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 LGALSLQ3ZCW2 172 aaPredicted RBP8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 SMUG1Q53HV7 270 aa8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 CST9LP1Q5W188 147 aa8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 NEGR1Q7Z3B1 354 aa8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 STOML3Q8TAV4 291 aa8.73□□□□□ -1.01
NPLOC4-213ENST00000573519 KIAA1109Q2LD37 5005 aa8.72□□□□□ -1.01
NPLOC4-213ENST00000573519 C16orf90A8MZG2 172 aa8.72□□□□□ -1.01
NPLOC4-213ENST00000573519 K7EQD1 137 aa8.72□□□□□ -1.01
NPLOC4-213ENST00000573519 GYPEP15421 78 aa8.72□□□□□ -1.01
NPLOC4-213ENST00000573519 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
NPLOC4-213ENST00000573519 TCTE3Q8IZS6 198 aa8.72□□□□□ -1.01
NPLOC4-213ENST00000573519 MBD3L1Q8WWY6 194 aa8.72□□□□□ -1.01
NPLOC4-213ENST00000573519 ARL2-SNX15V9GYD0 113 aa8.72□□□□□ -1.01
NPLOC4-213ENST00000573519 PKHD1P08F94 4074 aa8.72□□□□□ -1.01
NPLOC4-213ENST00000573519 UMAD1C9J7I0 102 aa8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 PAGE4O60829 102 aa8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 ORM1P02763 201 aa8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 PFN1P07737 140 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 TPT1P13693 172 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 PPT1P50897 306 aa8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 LINC00315P59091 139 aa8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 EIF5AP63241 154 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 SAPCD1Q5SSQ6 148 aa8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 Q86TA4 180 aa8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 NKX6-2Q9C056 277 aaPredicted RBP8.71□□□□□ -1.02
NPLOC4-213ENST00000573519 FBLL1A6NHQ2 334 aaKnown RBP8.7□□□□□ -1.02
NPLOC4-213ENST00000573519 H2AFB1P0C5Y9 115 aa8.7□□□□□ -1.02
NPLOC4-213ENST00000573519 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
NPLOC4-213ENST00000573519 HIST1H2BAQ96A08 127 aa8.7□□□□□ -1.02
NPLOC4-213ENST00000573519 MUC4Q99102 2169 aa8.69□□□□□ -1.02
NPLOC4-213ENST00000573519 LOC100131303A0A0U1RQF7 123 aa8.69□□□□□ -1.02
NPLOC4-213ENST00000573519 DPPA3Q6W0C5 159 aa8.69□□□□□ -1.02
NPLOC4-213ENST00000573519 SPATA12Q7Z6I5 190 aa8.69□□□□□ -1.02
NPLOC4-213ENST00000573519 NHLRC2Q8NBF2 726 aa8.69□□□□□ -1.02
NPLOC4-213ENST00000573519 TXNDC17Q9BRA2 123 aa8.69□□□□□ -1.02
NPLOC4-213ENST00000573519 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
NPLOC4-213ENST00000573519 IGHV3-73A0A0B4J1V6 119 aa8.68□□□□□ -1.02
NPLOC4-213ENST00000573519 C1QBP02746 253 aa8.68□□□□□ -1.02
NPLOC4-213ENST00000573519 AKR1C3P42330 323 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms