RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 CHCHD7Q9BUK0 85 aa8.23□□□□□ -1.09
CCDC40-208ENST00000572270 TMEM14CQ9P0S9 112 aa8.23□□□□□ -1.09
CCDC40-208ENST00000572270 TAAR5O14804 337 aa8.22□□□□□ -1.09
CCDC40-208ENST00000572270 PYYP10082 97 aa8.22□□□□□ -1.09
CCDC40-208ENST00000572270 CAMLGP49069 296 aa8.22□□□□□ -1.09
CCDC40-208ENST00000572270 TMEM128Q5BJH2 165 aa8.22□□□□□ -1.09
CCDC40-208ENST00000572270 SPINK6Q6UWN8 80 aa8.22□□□□□ -1.09
CCDC40-208ENST00000572270 TMEM14EPQ6UXP3 125 aa8.22□□□□□ -1.09
CCDC40-208ENST00000572270 AP3S1Q92572 193 aa8.22□□□□□ -1.09
CCDC40-208ENST00000572270 MCUBQ9NWR8 336 aa8.22□□□□□ -1.09
CCDC40-208ENST00000572270 TYMSP04818 313 aa8.21□□□□□ -1.1
CCDC40-208ENST00000572270 LINC00694P0DN24 101 aa8.21□□□□□ -1.1
CCDC40-208ENST00000572270 SMIM4Q8WVI0 70 aa8.21□□□□□ -1.1
CCDC40-208ENST00000572270 GTSF1Q8WW33 167 aa8.21□□□□□ -1.1
CCDC40-208ENST00000572270 SMIM8Q96KF7 97 aa8.21□□□□□ -1.1
CCDC40-208ENST00000572270 SDF2L1Q9HCN8 221 aa8.21□□□□□ -1.1
CCDC40-208ENST00000572270 DIRC3C9JPN6 131 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 CSN1S1P47710 185 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 NCS1P62166 190 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 ID3Q02535 119 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 MIC13Q5XKP0 118 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 NRARPQ7Z6K4 114 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 DYNC2LI1Q8TCX1 351 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 SPACA4Q8TDM5 124 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 GGACTQ9BVM4 153 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 LENEPQ9Y5L5 61 aa8.2□□□□□ -1.1
CCDC40-208ENST00000572270 IGHV3-64A0A075B6Q5 118 aa8.19□□□□□ -1.1
CCDC40-208ENST00000572270 RBAKDNA6NC62 111 aa8.19□□□□□ -1.1
CCDC40-208ENST00000572270 CHTF8P0CG12 524 aa8.19□□□□□ -1.1
CCDC40-208ENST00000572270 SMIM18P0DKX4 95 aa8.19□□□□□ -1.1
CCDC40-208ENST00000572270 CAV2P51636 162 aa8.19□□□□□ -1.1
CCDC40-208ENST00000572270 FGF8P55075 233 aaPredicted RBP8.19□□□□□ -1.1
CCDC40-208ENST00000572270 KCNS1Q96KK3 526 aa8.19□□□□□ -1.1
CCDC40-208ENST00000572270 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
CCDC40-208ENST00000572270 TRAV21A0A0B4J279 112 aa8.18□□□□□ -1.1
CCDC40-208ENST00000572270 VBP1P61758 197 aa8.18□□□□□ -1.1
CCDC40-208ENST00000572270 Q9H521 79 aa8.18□□□□□ -1.1
CCDC40-208ENST00000572270 VAX2Q9UIW0 290 aa8.18□□□□□ -1.1
CCDC40-208ENST00000572270 ANKRD20A5PA0PJZ0 165 aa8.17□□□□□ -1.1
CCDC40-208ENST00000572270 CTDSPLO15194 276 aa8.17□□□□□ -1.1
CCDC40-208ENST00000572270 TSC22D2O75157 780 aa8.17□□□□□ -1.1
CCDC40-208ENST00000572270 ENHOQ6UWT2 76 aa8.17□□□□□ -1.1
CCDC40-208ENST00000572270 CLRN3Q8NCR9 226 aa8.17□□□□□ -1.1
CCDC40-208ENST00000572270 ASB13Q8WXK3 278 aa8.17□□□□□ -1.1
CCDC40-208ENST00000572270 TMEM262E9PQX1 116 aa8.16□□□□□ -1.1
CCDC40-208ENST00000572270 SFT2D2O95562 160 aa8.16□□□□□ -1.1
CCDC40-208ENST00000572270 SCGB1D2O95969 90 aa8.16□□□□□ -1.1
CCDC40-208ENST00000572270 CNBPP62633 177 aaKnown RBP8.16□□□□□ -1.1
CCDC40-208ENST00000572270 ARL16Q0P5N6 197 aa8.16□□□□□ -1.1
CCDC40-208ENST00000572270 C15orf54Q8N8G6 183 aa8.16□□□□□ -1.1
CCDC40-208ENST00000572270 C20orf85Q9H1P6 137 aa8.16□□□□□ -1.1
CCDC40-208ENST00000572270 VCX3AQ9NNX9 186 aa8.16□□□□□ -1.1
CCDC40-208ENST00000572270 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.15□□□□□ -1.1
CCDC40-208ENST00000572270 FAM231BA6NCW3 169 aa8.15□□□□□ -1.1
CCDC40-208ENST00000572270 H7C1H1 209 aa8.15□□□□□ -1.1
CCDC40-208ENST00000572270 RGS5O15539 181 aa8.15□□□□□ -1.1
CCDC40-208ENST00000572270 NBEAP1P0C6P0 100 aa8.15□□□□□ -1.1
CCDC40-208ENST00000572270 TAS2R30P59541 319 aa8.15□□□□□ -1.1
CCDC40-208ENST00000572270 ZNF506Q5JVG8 444 aa8.15□□□□□ -1.1
CCDC40-208ENST00000572270 OR2T35Q8NGX2 323 aa8.15□□□□□ -1.1
CCDC40-208ENST00000572270 SAMD10Q9BYL1 202 aa8.15□□□□□ -1.1
CCDC40-208ENST00000572270 CRCT1Q9UGL9 99 aa8.15□□□□□ -1.1
CCDC40-208ENST00000572270 hDV102S1A0JD36 115 aa8.14□□□□□ -1.11
CCDC40-208ENST00000572270 ANGP03950 147 aaKnown RBP8.14□□□□□ -1.11
CCDC40-208ENST00000572270 RPL29P47914 159 aaKnown RBP8.14□□□□□ -1.11
CCDC40-208ENST00000572270 PPP1R1AQ13522 171 aa8.14□□□□□ -1.11
CCDC40-208ENST00000572270 IL18Q14116 193 aa8.14□□□□□ -1.11
CCDC40-208ENST00000572270 MIAQ16674 131 aa8.14□□□□□ -1.11
CCDC40-208ENST00000572270 ZFP2Q6ZN57 461 aa8.14□□□□□ -1.11
CCDC40-208ENST00000572270 PARLQ9H300 379 aa8.14□□□□□ -1.11
CCDC40-208ENST00000572270 AP5S1Q9NUS5 200 aa8.14□□□□□ -1.11
CCDC40-208ENST00000572270 RABL2AQ9UBK7 228 aaPredicted RBP8.14□□□□□ -1.11
CCDC40-208ENST00000572270 TRAV26-2A0A0B4J265 109 aa8.13□□□□□ -1.11
CCDC40-208ENST00000572270 PGPEP1LA6NFU8 196 aa8.13□□□□□ -1.11
CCDC40-208ENST00000572270 TMED6Q8WW62 240 aa8.13□□□□□ -1.11
CCDC40-208ENST00000572270 PHYHIPLQ96FC7 376 aa8.13□□□□□ -1.11
CCDC40-208ENST00000572270 SLC25A2Q9BXI2 301 aa8.13□□□□□ -1.11
CCDC40-208ENST00000572270 A8MWV9 139 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 F6UZH7 168 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 FAUP35544 74 aaKnown RBP8.12□□□□□ -1.11
CCDC40-208ENST00000572270 BAXQ07812 192 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 C14orf178Q8N769 122 aaPredicted RBP8.12□□□□□ -1.11
CCDC40-208ENST00000572270 OR2G3Q8NGZ4 309 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 PTH2Q96A98 100 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 LINC00479Q96M42 142 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 FUNDC2Q9BWH2 189 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 MIXL1Q9H2W2 232 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 UQCC1Q9NVA1 299 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 Q9UF83 564 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 WDR83OSQ9Y284 106 aa8.12□□□□□ -1.11
CCDC40-208ENST00000572270 PRR4Q16378 134 aa8.11□□□□□ -1.11
CCDC40-208ENST00000572270 MAJINQ3KP22 176 aa8.11□□□□□ -1.11
CCDC40-208ENST00000572270 MCFD2Q8NI22 146 aa8.11□□□□□ -1.11
CCDC40-208ENST00000572270 LYPD6BQ8NI32 183 aa8.11□□□□□ -1.11
CCDC40-208ENST00000572270 C9orf85Q96MD7 179 aa8.11□□□□□ -1.11
CCDC40-208ENST00000572270 UBE2L5PA0A1B0GUS4 154 aa8.1□□□□□ -1.11
CCDC40-208ENST00000572270 TCRBP04435 133 aa8.1□□□□□ -1.11
CCDC40-208ENST00000572270 RANP62826 216 aaKnown RBP8.1□□□□□ -1.11
CCDC40-208ENST00000572270 MPV17L2Q567V2 206 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms