RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 A0A1W2PRE2 83 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 CBY3A6NI87 242 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 GPX1P07203 203 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 HTN1P15515 57 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 Q6ZR54 194 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 POM121L12Q8N7R1 296 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 ZNF680Q8NEM1 530 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 RXFP4Q8TDU9 374 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 VSIG2Q96IQ7 327 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 SGK494Q96LW2 274 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 HYLS1Q96M11 299 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 LINC00479Q96M42 142 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 C8orf49Q96NF6 230 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 ACTR3CQ9C0K3 210 aaPredicted RBP6.04□□□□□ -1.44
SMG6-210ENST00000572205 MDFICQ9P1T7 246 aa6.04□□□□□ -1.44
SMG6-210ENST00000572205 RYR1P21817 5038 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 MAP1LC3B2A6NCE7 125 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 TYMSP04818 313 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 ATP5G1P05496 136 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 SEC11BP0C7V7 166 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 HTN3P15516 51 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 ATP5G3P48201 142 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 LGALSLQ3ZCW2 172 aaPredicted RBP6.03□□□□□ -1.44
SMG6-210ENST00000572205 MUC21Q5SSG8 566 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 COX8CQ7Z4L0 72 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 Q86TA4 180 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 TMEM75Q8N9X5 138 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 ATG101Q9BSB4 218 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 MAP1LC3BQ9GZQ8 125 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 TMEM167BQ9NRX6 74 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 EPDR1Q9UM22 224 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 RPH3ALQ9UNE2 315 aa6.03□□□□□ -1.44
SMG6-210ENST00000572205 IGHV3-16A0A0C4DH30 117 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 A0A0D9SG52 128 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 A0A1B0GVG6 124 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 SERTM2A0A1B0GWG4 89 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 GAGE12BA1L429 117 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 GAGE7O76087 117 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 C1QBP02746 253 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 GAGE12FP0CL80 117 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 GAGE12GP0CL81 117 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 GAGE12IP0CL82 117 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 CSN1S1P47710 185 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 TMUB2Q71RG4 321 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 CYB561D1Q8N8Q1 229 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 MBD3L1Q8WWY6 194 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 MRPL16Q9NX20 251 aaKnown RBP6.02□□□□□ -1.45
SMG6-210ENST00000572205 PSG8Q9UQ74 426 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
SMG6-210ENST00000572205 TRAV34A0A0B4J273 112 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 A0A1B0GVY2 172 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 SNURFLB1AK76 121 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 PEX7O00628 323 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 RTL8CO15255 209 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 P0DMU3 169 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 FAM231AP0DMU4 169 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 FAM231CP0DMU5 169 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 CRIP1P50238 77 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 UBE2G2P60604 165 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 FLI1Q01543 452 aaPredicted RBP6.01□□□□□ -1.45
SMG6-210ENST00000572205 LGALS9BQ3B8N2 356 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 C9orf62Q8N4C0 152 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 C15orf53Q8NAA6 179 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 ZNRF2Q8NHG8 242 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 C9orf85Q96MD7 179 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 LINC00588Q9Y4M8 146 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 HSPG2P98160 4391 aa6.01□□□□□ -1.45
SMG6-210ENST00000572205 TRAV26-1A0A087WT03 109 aa6□□□□□ -1.45
SMG6-210ENST00000572205 TRGV1A0A0A0MS02 117 aa6□□□□□ -1.45
SMG6-210ENST00000572205 IGKV3D-20A0A0C4DH25 116 aa6□□□□□ -1.45
SMG6-210ENST00000572205 TRBV6-1A0A0K0K1D8 114 aa6□□□□□ -1.45
SMG6-210ENST00000572205 F5H768 121 aa6□□□□□ -1.45
SMG6-210ENST00000572205 H3BNG1 76 aa6□□□□□ -1.45
SMG6-210ENST00000572205 GNRH2O43555 120 aa6□□□□□ -1.45
SMG6-210ENST00000572205 RNASE3P12724 160 aaKnown RBP6□□□□□ -1.45
SMG6-210ENST00000572205 ZNF415Q09FC8 603 aa6□□□□□ -1.45
SMG6-210ENST00000572205 FHL2Q14192 279 aa6□□□□□ -1.45
SMG6-210ENST00000572205 TMEM183BQ1AE95 376 aa6□□□□□ -1.45
SMG6-210ENST00000572205 RNF212Q495C1 297 aa6□□□□□ -1.45
SMG6-210ENST00000572205 FAM74A1Q5RGS3 127 aa6□□□□□ -1.45
SMG6-210ENST00000572205 AKR1C8PQ5T2L2 129 aa6□□□□□ -1.45
SMG6-210ENST00000572205 DPPA3Q6W0C5 159 aa6□□□□□ -1.45
SMG6-210ENST00000572205 TMEM183AQ8IXX5 376 aa6□□□□□ -1.45
SMG6-210ENST00000572205 CMTM2Q8TAZ6 248 aa6□□□□□ -1.45
SMG6-210ENST00000572205 RASL10AQ92737 203 aa6□□□□□ -1.45
SMG6-210ENST00000572205 ZC2HC1AQ96GY0 325 aa6□□□□□ -1.45
SMG6-210ENST00000572205 ZNF471Q9BX82 626 aaPredicted RBP6□□□□□ -1.45
SMG6-210ENST00000572205 TREM1Q9NP99 234 aa6□□□□□ -1.45
SMG6-210ENST00000572205 A0A096LPF7 62 aa5.99□□□□□ -1.45
SMG6-210ENST00000572205 TRAV21A0A0B4J279 112 aa5.99□□□□□ -1.45
SMG6-210ENST00000572205 KANTRA0A1W2PQU2 76 aa5.99□□□□□ -1.45
SMG6-210ENST00000572205 UMAD1C9J7I0 102 aa5.99□□□□□ -1.45
SMG6-210ENST00000572205 GCGP01275 180 aa5.99□□□□□ -1.45
SMG6-210ENST00000572205 LTAP01374 205 aa5.99□□□□□ -1.45
SMG6-210ENST00000572205 PFN1P07737 140 aaKnown RBP5.99□□□□□ -1.45
SMG6-210ENST00000572205 CCL20P78556 96 aa5.99□□□□□ -1.45
SMG6-210ENST00000572205 FAM213BQ8TBF2 198 aa5.99□□□□□ -1.45
SMG6-210ENST00000572205 ZNF479Q96JC4 524 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms