RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 Q86TA4 180 aa9.86□□□□□ -0.83
RPAIN-211ENST00000572174 TMEM183AQ8IXX5 376 aa9.86□□□□□ -0.83
RPAIN-211ENST00000572174 C9orf62Q8N4C0 152 aa9.86□□□□□ -0.83
RPAIN-211ENST00000572174 PLA2G2EQ9NZK7 142 aa9.86□□□□□ -0.83
RPAIN-211ENST00000572174 TRBV6-1A0A0K0K1D8 114 aa9.85□□□□□ -0.83
RPAIN-211ENST00000572174 H3BNG1 76 aa9.85□□□□□ -0.83
RPAIN-211ENST00000572174 SPINK4O60575 86 aa9.85□□□□□ -0.83
RPAIN-211ENST00000572174 SLAQ13239 276 aa9.85□□□□□ -0.83
RPAIN-211ENST00000572174 TMEM88Q6PEY1 159 aa9.85□□□□□ -0.83
RPAIN-211ENST00000572174 Q6ZTI0 123 aa9.85□□□□□ -0.83
RPAIN-211ENST00000572174 TVP23CQ96ET8 276 aa9.85□□□□□ -0.83
RPAIN-211ENST00000572174 SGK494Q96LW2 274 aa9.85□□□□□ -0.83
RPAIN-211ENST00000572174 FABP5P3A8MUU1 101 aa9.84□□□□□ -0.83
RPAIN-211ENST00000572174 FAM3BP58499 235 aaPredicted RBP9.84□□□□□ -0.83
RPAIN-211ENST00000572174 UBE2DNLQ8IWF7 75 aa9.84□□□□□ -0.83
RPAIN-211ENST00000572174 C8orf49Q96NF6 230 aa9.84□□□□□ -0.83
RPAIN-211ENST00000572174 TRAV34A0A0B4J273 112 aa9.83□□□□□ -0.84
RPAIN-211ENST00000572174 A0A1B0GV50 99 aa9.83□□□□□ -0.84
RPAIN-211ENST00000572174 M0R2P5 195 aa9.83□□□□□ -0.84
RPAIN-211ENST00000572174 OR5I1Q13606 314 aa9.83□□□□□ -0.84
RPAIN-211ENST00000572174 RNF212Q495C1 297 aa9.83□□□□□ -0.84
RPAIN-211ENST00000572174 COX8CQ7Z4L0 72 aa9.83□□□□□ -0.84
RPAIN-211ENST00000572174 LTAP01374 205 aa9.82□□□□□ -0.84
RPAIN-211ENST00000572174 TYMSP04818 313 aa9.82□□□□□ -0.84
RPAIN-211ENST00000572174 BLOC1S1P78537 153 aa9.82□□□□□ -0.84
RPAIN-211ENST00000572174 FAM162BQ5T6X4 162 aa9.82□□□□□ -0.84
RPAIN-211ENST00000572174 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
RPAIN-211ENST00000572174 RASL10AQ92737 203 aa9.82□□□□□ -0.84
RPAIN-211ENST00000572174 GNG13Q9P2W3 67 aa9.82□□□□□ -0.84
RPAIN-211ENST00000572174 NACAE9PAV3 2078 aa9.81□□□□□ -0.84
RPAIN-211ENST00000572174 IGHV3-16A0A0C4DH30 117 aa9.81□□□□□ -0.84
RPAIN-211ENST00000572174 PDE6DO43924 150 aa9.81□□□□□ -0.84
RPAIN-211ENST00000572174 CIDEAO60543 219 aa9.81□□□□□ -0.84
RPAIN-211ENST00000572174 CCL18P55774 89 aa9.81□□□□□ -0.84
RPAIN-211ENST00000572174 Q6ZQT7 251 aa9.81□□□□□ -0.84
RPAIN-211ENST00000572174 LINC00479Q96M42 142 aa9.81□□□□□ -0.84
RPAIN-211ENST00000572174 MRPL16Q9NX20 251 aaKnown RBP9.81□□□□□ -0.84
RPAIN-211ENST00000572174 TRAV26-1A0A087WT03 109 aa9.8□□□□□ -0.84
RPAIN-211ENST00000572174 NUDT3O95989 172 aa9.8□□□□□ -0.84
RPAIN-211ENST00000572174 S100A4P26447 101 aaKnown RBP9.8□□□□□ -0.84
RPAIN-211ENST00000572174 MEF2BQ02080 365 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-211ENST00000572174 MDFICQ9P1T7 246 aa9.8□□□□□ -0.84
RPAIN-211ENST00000572174 LYSTQ99698 3801 aa9.8□□□□□ -0.84
RPAIN-211ENST00000572174 DYNC2H1Q8NCM8 4307 aaKnown RBP9.79□□□□□ -0.84
RPAIN-211ENST00000572174 TRAV4A0A0B4J268 109 aa9.79□□□□□ -0.84
RPAIN-211ENST00000572174 SCO2A0A1W2PP80 73 aa9.79□□□□□ -0.84
RPAIN-211ENST00000572174 ASIPP42127 132 aa9.79□□□□□ -0.84
RPAIN-211ENST00000572174 ZNF80P51504 273 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-211ENST00000572174 PIK3CD-AS1Q5SR53 167 aa9.79□□□□□ -0.84
RPAIN-211ENST00000572174 C11orf52Q96A22 123 aa9.79□□□□□ -0.84
RPAIN-211ENST00000572174 SMIM12Q96EX1 92 aa9.79□□□□□ -0.84
RPAIN-211ENST00000572174 PRO0255Q9UI72 69 aa9.79□□□□□ -0.84
RPAIN-211ENST00000572174 TRGV4A0A0C4DH28 118 aa9.78□□□□□ -0.84
RPAIN-211ENST00000572174 A0A1B0GVG6 124 aa9.78□□□□□ -0.84
RPAIN-211ENST00000572174 GNRH2O43555 120 aa9.78□□□□□ -0.84
RPAIN-211ENST00000572174 ORM1P02763 201 aa9.78□□□□□ -0.84
RPAIN-211ENST00000572174 BCL2P10415 239 aa9.78□□□□□ -0.84
RPAIN-211ENST00000572174 PTH2Q96A98 100 aa9.78□□□□□ -0.84
RPAIN-211ENST00000572174 ZC2HC1AQ96GY0 325 aa9.78□□□□□ -0.84
RPAIN-211ENST00000572174 BIN3Q9NQY0 253 aa9.78□□□□□ -0.84
RPAIN-211ENST00000572174 VAX2Q9UIW0 290 aa9.78□□□□□ -0.84
RPAIN-211ENST00000572174 B4DEV8 164 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 PAX4O43316 350 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 HOXA5P20719 270 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 ZNF674Q2M3X9 581 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 ZNF876PQ49A33 203 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 ALKAL2Q6UX46 152 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 BAGE2Q86Y30 109 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 OR4C5Q8NGB2 326 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 PCNPQ8WW12 178 aaKnown RBP9.77□□□□□ -0.85
RPAIN-211ENST00000572174 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 IL36BQ9NZH7 164 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 ICOSQ9Y6W8 199 aa9.77□□□□□ -0.85
RPAIN-211ENST00000572174 ALMS1Q8TCU4 4167 aa9.76□□□□□ -0.85
RPAIN-211ENST00000572174 SH2D1AO60880 128 aa9.76□□□□□ -0.85
RPAIN-211ENST00000572174 RPL35P42766 123 aaKnown RBP9.76□□□□□ -0.85
RPAIN-211ENST00000572174 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
RPAIN-211ENST00000572174 DNLZQ5SXM8 178 aa9.76□□□□□ -0.85
RPAIN-211ENST00000572174 SYT8Q8NBV8 401 aa9.76□□□□□ -0.85
RPAIN-211ENST00000572174 A0A0J9YY99 117 aa9.75□□□□□ -0.85
RPAIN-211ENST00000572174 C9JCJ5 164 aa9.75□□□□□ -0.85
RPAIN-211ENST00000572174 IGHV3-53P01767 116 aa9.75□□□□□ -0.85
RPAIN-211ENST00000572174 CXCL1P09341 107 aa9.75□□□□□ -0.85
RPAIN-211ENST00000572174 CCL20P78556 96 aa9.75□□□□□ -0.85
RPAIN-211ENST00000572174 PLECQ15149 4684 aaKnown RBP9.75□□□□□ -0.85
RPAIN-211ENST00000572174 MRPL23Q16540 153 aaKnown RBP9.75□□□□□ -0.85
RPAIN-211ENST00000572174 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
RPAIN-211ENST00000572174 C11orf21Q9P2W6 132 aa9.75□□□□□ -0.85
RPAIN-211ENST00000572174 HHLA3Q9XRX5 114 aa9.75□□□□□ -0.85
RPAIN-211ENST00000572174 A8MWV9 139 aa9.74□□□□□ -0.85
RPAIN-211ENST00000572174 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
RPAIN-211ENST00000572174 RNASE3P12724 160 aaKnown RBP9.74□□□□□ -0.85
RPAIN-211ENST00000572174 GNG4P50150 75 aa9.74□□□□□ -0.85
RPAIN-211ENST00000572174 RYR3Q15413 4870 aa9.74□□□□□ -0.85
RPAIN-211ENST00000572174 IGKV3D-20A0A0C4DH25 116 aa9.73□□□□□ -0.85
RPAIN-211ENST00000572174 M0R036 132 aa9.73□□□□□ -0.85
RPAIN-211ENST00000572174 MED14OSP0DP75 135 aa9.73□□□□□ -0.85
RPAIN-211ENST00000572174 NKX2-5P52952 324 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-211ENST00000572174 CRYBA4P53673 196 aa9.73□□□□□ -0.85
RPAIN-211ENST00000572174 FHL2Q14192 279 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms