RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ZNF266Q14584 549 aa12.79□□□□□ -0.36
SCARF1-204ENST00000570902 ACOT6Q3I5F7 207 aaPredicted RBP12.79□□□□□ -0.36
SCARF1-204ENST00000570902 KHDC3LQ587J8 217 aa12.79□□□□□ -0.36
SCARF1-204ENST00000570902 PRR9Q5T870 116 aa12.79□□□□□ -0.36
SCARF1-204ENST00000570902 HSD17B11Q8NBQ5 300 aa12.79□□□□□ -0.36
SCARF1-204ENST00000570902 ZNF492Q9P255 531 aa12.79□□□□□ -0.36
SCARF1-204ENST00000570902 TNFSF18Q9UNG2 199 aa12.79□□□□□ -0.36
SCARF1-204ENST00000570902 TRBV7-9A0A0J9YWB2 115 aa12.78□□□□□ -0.36
SCARF1-204ENST00000570902 RNF222A6NCQ9 220 aa12.78□□□□□ -0.36
SCARF1-204ENST00000570902 RAB2AP61019 212 aa12.78□□□□□ -0.36
SCARF1-204ENST00000570902 RANP62826 216 aaKnown RBP12.78□□□□□ -0.36
SCARF1-204ENST00000570902 OR10G4Q8NGN3 311 aa12.78□□□□□ -0.36
SCARF1-204ENST00000570902 A0A1W2PPV4 95 aa12.77□□□□□ -0.37
SCARF1-204ENST00000570902 C9JCJ5 164 aa12.77□□□□□ -0.37
SCARF1-204ENST00000570902 SFTA3P0C7M3 94 aa12.77□□□□□ -0.37
SCARF1-204ENST00000570902 Q6ZQT7 251 aa12.77□□□□□ -0.37
SCARF1-204ENST00000570902 ZNF479Q96JC4 524 aa12.77□□□□□ -0.37
SCARF1-204ENST00000570902 LRCOL1A6NCL2 159 aa12.76□□□□□ -0.37
SCARF1-204ENST00000570902 SMLR1H3BR10 107 aa12.76□□□□□ -0.37
SCARF1-204ENST00000570902 ATP6V0CP27449 155 aa12.76□□□□□ -0.37
SCARF1-204ENST00000570902 ZNF138P52744 262 aa12.76□□□□□ -0.37
SCARF1-204ENST00000570902 SH2D6Q7Z4S9 175 aa12.76□□□□□ -0.37
SCARF1-204ENST00000570902 OR10G9Q8NGN4 311 aa12.76□□□□□ -0.37
SCARF1-204ENST00000570902 OR10G7Q8NGN6 311 aa12.76□□□□□ -0.37
SCARF1-204ENST00000570902 RASL10AQ92737 203 aa12.76□□□□□ -0.37
SCARF1-204ENST00000570902 SPXQ9BT56 116 aa12.76□□□□□ -0.37
SCARF1-204ENST00000570902 HMGB3O15347 200 aaKnown RBP12.75□□□□□ -0.37
SCARF1-204ENST00000570902 CSN1S1P47710 185 aa12.75□□□□□ -0.37
SCARF1-204ENST00000570902 RPL7L1Q6DKI1 246 aaKnown RBP12.75□□□□□ -0.37
SCARF1-204ENST00000570902 OR2G3Q8NGZ4 309 aa12.75□□□□□ -0.37
SCARF1-204ENST00000570902 PSMG3Q9BT73 122 aaPredicted RBP12.75□□□□□ -0.37
SCARF1-204ENST00000570902 ARPC5O15511 151 aa12.74□□□□□ -0.37
SCARF1-204ENST00000570902 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
SCARF1-204ENST00000570902 Q8N814 137 aa12.74□□□□□ -0.37
SCARF1-204ENST00000570902 SH3BGRL3Q9H299 93 aa12.74□□□□□ -0.37
SCARF1-204ENST00000570902 BOLA1Q9Y3E2 137 aa12.74□□□□□ -0.37
SCARF1-204ENST00000570902 IGHV3-38A0A0C4DH36 116 aa12.73□□□□□ -0.37
SCARF1-204ENST00000570902 C1QBP02746 253 aa12.73□□□□□ -0.37
SCARF1-204ENST00000570902 PLA2G1BP04054 148 aaKnown RBP12.73□□□□□ -0.37
SCARF1-204ENST00000570902 TIRAPP58753 221 aa12.73□□□□□ -0.37
SCARF1-204ENST00000570902 Q8TAT8 98 aa12.73□□□□□ -0.37
SCARF1-204ENST00000570902 HYLS1Q96M11 299 aa12.73□□□□□ -0.37
SCARF1-204ENST00000570902 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
SCARF1-204ENST00000570902 BORCS7-ASMTA0A0B4J1R7 106 aa12.72□□□□□ -0.37
SCARF1-204ENST00000570902 TRAV4A0A0B4J268 109 aa12.72□□□□□ -0.37
SCARF1-204ENST00000570902 CDC34P49427 236 aaPredicted RBP12.72□□□□□ -0.37
SCARF1-204ENST00000570902 SERF2P84101 59 aa12.72□□□□□ -0.37
SCARF1-204ENST00000570902 LINC01556Q5JQF7 62 aa12.72□□□□□ -0.37
SCARF1-204ENST00000570902 PQLC2Q6ZP29 291 aa12.72□□□□□ -0.37
SCARF1-204ENST00000570902 RPH3ALQ9UNE2 315 aa12.72□□□□□ -0.37
SCARF1-204ENST00000570902 RBAKDNA6NC62 111 aa12.71□□□□□ -0.37
SCARF1-204ENST00000570902 PGPA6NDG6 321 aa12.71□□□□□ -0.37
SCARF1-204ENST00000570902 IBA57-AS1B1ANH7 110 aa12.71□□□□□ -0.37
SCARF1-204ENST00000570902 PPT1P50897 306 aa12.71□□□□□ -0.37
SCARF1-204ENST00000570902 TMEM183BQ1AE95 376 aa12.71□□□□□ -0.37
SCARF1-204ENST00000570902 FAM159AQ6UWV7 190 aa12.71□□□□□ -0.37
SCARF1-204ENST00000570902 TMEM183AQ8IXX5 376 aa12.71□□□□□ -0.37
SCARF1-204ENST00000570902 OR4C5Q8NGB2 326 aa12.71□□□□□ -0.37
SCARF1-204ENST00000570902 MBP02144 154 aa12.7□□□□□ -0.38
SCARF1-204ENST00000570902 ARL14EPLP0DKL9 152 aa12.7□□□□□ -0.38
SCARF1-204ENST00000570902 Q6AWC8 147 aa12.7□□□□□ -0.38
SCARF1-204ENST00000570902 NHLRC2Q8NBF2 726 aa12.7□□□□□ -0.38
SCARF1-204ENST00000570902 CMTM2Q8TAZ6 248 aa12.7□□□□□ -0.38
SCARF1-204ENST00000570902 OTORQ9NRC9 128 aa12.7□□□□□ -0.38
SCARF1-204ENST00000570902 TRAV8-6A0A0B4J262 113 aa12.69□□□□□ -0.38
SCARF1-204ENST00000570902 KRTAP29-1A8MX34 341 aaPredicted RBP12.69□□□□□ -0.38
SCARF1-204ENST00000570902 DIRC3C9JPN6 131 aa12.69□□□□□ -0.38
SCARF1-204ENST00000570902 FAM74A1Q5RGS3 127 aa12.69□□□□□ -0.38
SCARF1-204ENST00000570902 RAB24Q969Q5 203 aa12.69□□□□□ -0.38
SCARF1-204ENST00000570902 FAM30AQ9NZY2 134 aa12.69□□□□□ -0.38
SCARF1-204ENST00000570902 DNAH8Q96JB1 4490 aa12.68□□□□□ -0.38
SCARF1-204ENST00000570902 TAAR5O14804 337 aa12.68□□□□□ -0.38
SCARF1-204ENST00000570902 STAG3L2P0CL84 134 aa12.68□□□□□ -0.38
SCARF1-204ENST00000570902 STAG3L3P0CL85 134 aa12.68□□□□□ -0.38
SCARF1-204ENST00000570902 DEFB104AQ8WTQ1 72 aa12.68□□□□□ -0.38
SCARF1-204ENST00000570902 Q9HAA7 133 aa12.68□□□□□ -0.38
SCARF1-204ENST00000570902 CYTL1Q9NRR1 136 aa12.68□□□□□ -0.38
SCARF1-204ENST00000570902 LENEPQ9Y5L5 61 aa12.68□□□□□ -0.38
SCARF1-204ENST00000570902 LOC100131303A0A0U1RQF7 123 aa12.67□□□□□ -0.38
SCARF1-204ENST00000570902 M0R2P5 195 aa12.67□□□□□ -0.38
SCARF1-204ENST00000570902 TDRG1Q3Y452 100 aa12.67□□□□□ -0.38
SCARF1-204ENST00000570902 OR11H4Q8NGC9 324 aa12.67□□□□□ -0.38
SCARF1-204ENST00000570902 ACTR3CQ9C0K3 210 aaPredicted RBP12.67□□□□□ -0.38
SCARF1-204ENST00000570902 PFN1P07737 140 aaKnown RBP12.66□□□□□ -0.38
SCARF1-204ENST00000570902 GNG5P63218 68 aa12.66□□□□□ -0.38
SCARF1-204ENST00000570902 OR10J3Q5JRS4 329 aa12.66□□□□□ -0.38
SCARF1-204ENST00000570902 GOLT1AQ6ZVE7 132 aa12.66□□□□□ -0.38
SCARF1-204ENST00000570902 NAGKQ9UJ70 344 aa12.66□□□□□ -0.38
SCARF1-204ENST00000570902 HMSDA8MTL9 139 aa12.65□□□□□ -0.38
SCARF1-204ENST00000570902 GCHFRP30047 84 aa12.65□□□□□ -0.38
SCARF1-204ENST00000570902 LINC00528Q8N1L1 170 aa12.65□□□□□ -0.38
SCARF1-204ENST00000570902 KCNRGQ8N5I3 272 aa12.65□□□□□ -0.38
SCARF1-204ENST00000570902 TM2D2Q9BX73 214 aa12.65□□□□□ -0.38
SCARF1-204ENST00000570902 CXorf1O96002 111 aa12.64□□□□□ -0.39
SCARF1-204ENST00000570902 GATA1P15976 413 aaPredicted RBP12.64□□□□□ -0.39
SCARF1-204ENST00000570902 ZNF345Q14585 488 aa12.64□□□□□ -0.39
SCARF1-204ENST00000570902 LAGE3Q14657 143 aa12.64□□□□□ -0.39
SCARF1-204ENST00000570902 SERTAD4-AS1Q5TG53 156 aa12.64□□□□□ -0.39
SCARF1-204ENST00000570902 Q6ZSA8 131 aa12.64□□□□□ -0.39
SCARF1-204ENST00000570902 TMED6Q8WW62 240 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms