RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 JPT2Q9H910 190 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 TREM1Q9NP99 234 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 PSENENQ9NZ42 101 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 NAGKQ9UJ70 344 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 FSIP2Q5CZC0 6907 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 ANKRD20A5PA0PJZ0 165 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 PGPEP1LA6NFU8 196 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 FAM24AA6NFZ4 105 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 FBLL1A6NHQ2 334 aaKnown RBP4.48□□□□□ -1.69
SMG6-205ENST00000570659 DISC1C4P0D8 188 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 M0R2P5 195 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 PFN1P07737 140 aaKnown RBP4.48□□□□□ -1.69
SMG6-205ENST00000570659 STAG3L3P0CL85 134 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 AKAIN1P0CW23 69 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 ZNF138P52744 262 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 PRR3P79522 188 aaKnown RBP4.48□□□□□ -1.69
SMG6-205ENST00000570659 BAK1Q16611 211 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 Q6AWC8 147 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 ZNF546Q86UE3 836 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 TMEM75Q8N9X5 138 aa4.48□□□□□ -1.69
SMG6-205ENST00000570659 XKRY2A2RUG3 117 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 RAB19A4D1S5 217 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 C5orf51A6NDU8 294 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 F6UZH7 168 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 GOSR2O14653 212 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 MBPP02686 304 aaPredicted RBP4.47□□□□□ -1.69
SMG6-205ENST00000570659 NMBP08949 121 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 SLC25A6P12236 298 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 CTF1Q16619 201 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 VWC2Q2TAL6 325 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 TDRG1Q3Y452 100 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.47□□□□□ -1.69
SMG6-205ENST00000570659 SPACA4Q8TDM5 124 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 NPVFQ9HCQ7 196 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 KCNIP3Q9Y2W7 256 aa4.47□□□□□ -1.69
SMG6-205ENST00000570659 TRBV6-4A0A1B0GX49 114 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 GGTLC3B5MD39 225 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 MED6O75586 246 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 ZNF80P51504 273 aaPredicted RBP4.46□□□□□ -1.7
SMG6-205ENST00000570659 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
SMG6-205ENST00000570659 RHOHQ15669 191 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 ZNF506Q5JVG8 444 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 TMEM78Q5T7P6 136 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 UFSP1Q6NVU6 142 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 Q6ZNX1 250 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 MIR17HGQ75NE6 70 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 SH2D6Q7Z4S9 175 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 NRARPQ7Z6K4 114 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 OR2T35Q8NGX2 323 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 FXYD5Q96DB9 178 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 SMIM8Q96KF7 97 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 CIB3Q96Q77 187 aaPredicted RBP4.46□□□□□ -1.7
SMG6-205ENST00000570659 PRRT1Q99946 306 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 C20orf85Q9H1P6 137 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 Q9H521 79 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 C11orf1Q9H5F2 150 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 CACFD1Q9UGQ2 172 aa4.46□□□□□ -1.7
SMG6-205ENST00000570659 TRAV8-1A0A0A6YYK1 113 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 SERTM2A0A1B0GWG4 89 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 DUXBA0A1W2PPF3 345 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 H0Y8G0 127 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 SFT2D2O95562 160 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 HLA-DQA1P01909 254 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 OR10J4P0C629 311 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 HIST1H1EP10412 219 aaKnown RBP4.45□□□□□ -1.7
SMG6-205ENST00000570659 CAMLGP49069 296 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 GUK1Q16774 197 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 CNPY1Q3B7I2 92 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 ZNF876PQ49A33 203 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 PXDC1Q5TGL8 231 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 LINC00479Q96M42 142 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 C9orf85Q96MD7 179 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 MCUBQ9NWR8 336 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 PLAC8Q9NZF1 115 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 TMEM14CQ9P0S9 112 aa4.45□□□□□ -1.7
SMG6-205ENST00000570659 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 A0A0D9SG52 128 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 C7orf66A4D0T2 115 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 FNDC10F2Z333 226 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 RNASE3P12724 160 aaKnown RBP4.44□□□□□ -1.7
SMG6-205ENST00000570659 S100A7P31151 101 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 BCAP31P51572 246 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 SRPXP78539 464 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 SSBP1Q04837 148 aaKnown RBP4.44□□□□□ -1.7
SMG6-205ENST00000570659 MPV17L2Q567V2 206 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 CLPSL2Q6UWE3 100 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 FAM159AQ6UWV7 190 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 CYB561D1Q8N8Q1 229 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 SGK494Q96LW2 274 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 PRADC1Q9BSG0 188 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 PARLQ9H300 379 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 SLC39A9Q9NUM3 307 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 WDR83OSQ9Y284 106 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 TIMM9Q9Y5J7 89 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
SMG6-205ENST00000570659 CTDSPLO15194 276 aa4.43□□□□□ -1.7
SMG6-205ENST00000570659 CST7O76096 145 aa4.43□□□□□ -1.7
SMG6-205ENST00000570659 INPP1P49441 399 aa4.43□□□□□ -1.7
SMG6-205ENST00000570659 TMEM128Q5BJH2 165 aa4.43□□□□□ -1.7
SMG6-205ENST00000570659 LCE2DQ5TA82 110 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms