RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	COL5A1-AS1	Q5SY13	56 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	CASC2	Q6XLA1	102 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243		Q6ZS92	163 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	ZNF826P	Q6ZT77	177 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	ARPIN	Q7Z6K5	226 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	LINC00269	Q8N2A0	174 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	SVBP	Q8N300	66 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	C9orf62	Q8N4C0	152 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	PSMF1	Q92530	271 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	MUCL1	Q96DR8	90 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	LINC00467	Q9BRT7	94 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	PRO1933	Q9H354	126 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	C14orf132	Q9NPU4	83 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	TMEM242	Q9NWH2	141 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	SERP1	Q9Y6X1	66 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	MYH1	P12882	1939 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	ALPK3	Q96L96	1907 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	SCN3A	Q9NY46	2000 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	CECR2	Q9BXF3	1484 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	SNRNP200	O75643	2136 aa	Known RBP	0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	ADGRB3	O60242	1522 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	DOCK10	Q96BY6	2186 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	ADGRB1	O14514	1584 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	GLI3	P10071	1580 aa		0.79	□□□□□ -2.28
UBR1-209	ENST00000569243	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	CCDC88C	Q9P219	2028 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	TRAV10	A0A0B4J240	114 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	TRGV4	A0A0C4DH28	118 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	MUC21	A0A140T8X8	626 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	PVALEF	A0A1B0GWK0	134 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	TCRBV4S1A1T	A0A5B7	111 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	C2orf70	A6NJV1	201 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243		J3QLW9	94 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	APOC4-APOC2	K7ER74	178 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	SNCG	O76070	127 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	PROSC	O94903	275 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	UBL3	O95164	117 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	TNF	P01375	233 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	IGKC	P01834	107 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	APOC2	P02655	101 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	MT-ATP8	P03928	68 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	PIRT	P0C851	137 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	IL7	P13232	177 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	ADCYAP1	P18509	176 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	SNCA	P37840	140 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	LSM3	P62310	102 aa	Known RBP	0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	MIR22HG	Q0VDD5	57 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	TPRXL	Q17RH7	258 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	IQCJ	Q1A5X6	159 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243		Q56UQ5	140 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	SPANXN5	Q5MJ07	72 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	LINC01545	Q5VT33	79 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	ATOH7	Q8N100	152 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	TTC9C	Q8N5M4	171 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	PLPP5	Q8NEB5	264 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	SPACA4	Q8TDM5	124 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	SMIM7	Q9BQ49	75 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	LIMD2	Q9BT23	127 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	TIMM21	Q9BVV7	248 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243		Q9H521	79 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	HEATR1	Q9H583	2144 aa	Known RBP	0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	NAA60	Q9H7X0	242 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	SAR1A	Q9NR31	198 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	RPRM	Q9NS64	109 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	NHP2	Q9NX24	153 aa	Known RBP	0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	NDUFA12	Q9UI09	145 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	CCL26	Q9Y258	94 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	IER3IP1	Q9Y5U9	82 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	LHFPL6	Q9Y693	200 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	KTN1	Q86UP2	1357 aa	Known RBP	0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	CFTR	P13569	1480 aa		0.78	□□□□□ -2.28
UBR1-209	ENST00000569243	BAZ2B	Q9UIF8	2168 aa	Known RBP	0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	RP1L1	Q8IWN7	2480 aa	Predicted RBP	0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	TRAV12-1	A0A0B4J245	112 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	RBAKDN	A6NC62	111 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243		E7EUB6	86 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	HYPM	O75409	117 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	ERC2-IT1	O76042	136 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	MIF	P14174	115 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	DSCR4	P56555	118 aa	Predicted RBP	0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	NPC2	P61916	151 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	UBE2G1	P62253	170 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	UBA52	P62987	128 aa	Known RBP	0.77	□□□□□ -2.29
UBR1-209	ENST00000569243		Q6AWC8	147 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	OR2T2	Q6IF00	324 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	ATP11AUN	Q6ZP68	121 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	FOXI2	Q6ZQN5	318 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	SLC25A26	Q70HW3	274 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243		Q8N8P6	123 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	SPTSSB	Q8NFR3	76 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	ATP6V0E2	Q8NHE4	81 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	VSTM2A	Q8TAG5	236 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	TMEM254	Q8TBM7	123 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	COPS9	Q8WXC6	57 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	SPTSSA	Q969W0	71 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	LINC00526	Q96FQ7	95 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243		Q96M85	177 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243		Q9BRP9	147 aa		0.77	□□□□□ -2.29
UBR1-209	ENST00000569243	FAIM	Q9NVQ4	179 aa		0.77	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms