RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TCTAP57738 103 aa9.07□□□□□ -0.96
CDT1-203ENST00000569140 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
CDT1-203ENST00000569140 OR5I1Q13606 314 aa9.07□□□□□ -0.96
CDT1-203ENST00000569140 TMEM88Q6PEY1 159 aa9.07□□□□□ -0.96
CDT1-203ENST00000569140 NHLRC2Q8NBF2 726 aa9.07□□□□□ -0.96
CDT1-203ENST00000569140 LINC00476Q8WZB0 136 aa9.07□□□□□ -0.96
CDT1-203ENST00000569140 KCNS1Q96KK3 526 aa9.07□□□□□ -0.96
CDT1-203ENST00000569140 MDFICQ9P1T7 246 aa9.07□□□□□ -0.96
CDT1-203ENST00000569140 BLOC1S1P78537 153 aa9.06□□□□□ -0.96
CDT1-203ENST00000569140 APLNQ9ULZ1 77 aa9.06□□□□□ -0.96
CDT1-203ENST00000569140 ZFP30Q9Y2G7 519 aa9.06□□□□□ -0.96
CDT1-203ENST00000569140 IGHV3-16A0A0C4DH30 117 aa9.05□□□□□ -0.96
CDT1-203ENST00000569140 IGHV3-53P01767 116 aa9.05□□□□□ -0.96
CDT1-203ENST00000569140 S100A9P06702 114 aaKnown RBP9.05□□□□□ -0.96
CDT1-203ENST00000569140 ZC2HC1AQ96GY0 325 aa9.05□□□□□ -0.96
CDT1-203ENST00000569140 FABP5P3A8MUU1 101 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 M0R036 132 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 SPINK4O60575 86 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 NUDT3O95989 172 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 LTAP01374 205 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 ORM1P02763 201 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 BCL2P10415 239 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 S100A4P26447 101 aaKnown RBP9.04□□□□□ -0.96
CDT1-203ENST00000569140 TDRG1Q3Y452 100 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 UBE2DNLQ8IWF7 75 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 LINC00612Q8N6U2 182 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 C11orf21Q9P2W6 132 aa9.04□□□□□ -0.96
CDT1-203ENST00000569140 KMT2CQ8NEZ4 4911 aaKnown RBP9.03□□□□□ -0.96
CDT1-203ENST00000569140 A0A0J9YY99 117 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 TRBV6-1A0A0K0K1D8 114 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 B4DEV8 164 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 SH2D1AO60880 128 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 RPL35P42766 123 aaKnown RBP9.03□□□□□ -0.96
CDT1-203ENST00000569140 MEF2BQ02080 365 aaPredicted RBP9.03□□□□□ -0.96
CDT1-203ENST00000569140 FAM162BQ5T6X4 162 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 LGALS9CQ6DKI2 356 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 PRR27Q6MZM9 219 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 BAGE2Q86Y30 109 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 FAM210BQ96KR6 192 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 TXNDC17Q9BRA2 123 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 SPXQ9BT56 116 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 VAX2Q9UIW0 290 aa9.03□□□□□ -0.96
CDT1-203ENST00000569140 TRAV26-1A0A087WT03 109 aa9.02□□□□□ -0.97
CDT1-203ENST00000569140 TMSB15BA0A087X1C1 80 aa9.02□□□□□ -0.97
CDT1-203ENST00000569140 C9JCJ5 164 aa9.02□□□□□ -0.97
CDT1-203ENST00000569140 PDE6DO43924 150 aa9.02□□□□□ -0.97
CDT1-203ENST00000569140 ASIPP42127 132 aa9.02□□□□□ -0.97
CDT1-203ENST00000569140 LGALS9BQ3B8N2 356 aa9.02□□□□□ -0.97
CDT1-203ENST00000569140 C15orf53Q8NAA6 179 aa9.02□□□□□ -0.97
CDT1-203ENST00000569140 DERL1Q9BUN8 251 aa9.02□□□□□ -0.97
CDT1-203ENST00000569140 MED9Q9NWA0 146 aa9.02□□□□□ -0.97
CDT1-203ENST00000569140 M0R2P5 195 aa9.01□□□□□ -0.97
CDT1-203ENST00000569140 P0DMU3 169 aa9.01□□□□□ -0.97
CDT1-203ENST00000569140 FAM231AP0DMU4 169 aa9.01□□□□□ -0.97
CDT1-203ENST00000569140 FAM231CP0DMU5 169 aa9.01□□□□□ -0.97
CDT1-203ENST00000569140 MGST1P10620 155 aaKnown RBP9.01□□□□□ -0.97
CDT1-203ENST00000569140 HOXA5P20719 270 aa9.01□□□□□ -0.97
CDT1-203ENST00000569140 C11orf52Q96A22 123 aa9.01□□□□□ -0.97
CDT1-203ENST00000569140 TENM2Q9NT68 2774 aa9.01□□□□□ -0.97
CDT1-203ENST00000569140 ALMS1Q8TCU4 4167 aa9□□□□□ -0.97
CDT1-203ENST00000569140 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
CDT1-203ENST00000569140 TRGV4A0A0C4DH28 118 aa9□□□□□ -0.97
CDT1-203ENST00000569140 GRIFINA4D1Z8 144 aa9□□□□□ -0.97
CDT1-203ENST00000569140 SFTA3P0C7M3 94 aa9□□□□□ -0.97
CDT1-203ENST00000569140 TAGLN2P37802 199 aaKnown RBP9□□□□□ -0.97
CDT1-203ENST00000569140 GNG4P50150 75 aa9□□□□□ -0.97
CDT1-203ENST00000569140 CRIP1P50238 77 aa9□□□□□ -0.97
CDT1-203ENST00000569140 CEBPGP53567 150 aa9□□□□□ -0.97
CDT1-203ENST00000569140 CENPWQ5EE01 88 aa9□□□□□ -0.97
CDT1-203ENST00000569140 DYNC2H1Q8NCM8 4307 aaKnown RBP8.99□□□□□ -0.97
CDT1-203ENST00000569140 RAB19A4D1S5 217 aa8.99□□□□□ -0.97
CDT1-203ENST00000569140 H3BVH4 76 aa8.99□□□□□ -0.97
CDT1-203ENST00000569140 ZNF674Q2M3X9 581 aa8.99□□□□□ -0.97
CDT1-203ENST00000569140 ZNF876PQ49A33 203 aa8.99□□□□□ -0.97
CDT1-203ENST00000569140 TOR2AQ5JU69 321 aa8.99□□□□□ -0.97
CDT1-203ENST00000569140 OR4C5Q8NGB2 326 aa8.99□□□□□ -0.97
CDT1-203ENST00000569140 PCNPQ8WW12 178 aaKnown RBP8.99□□□□□ -0.97
CDT1-203ENST00000569140 LYSTQ99698 3801 aa8.99□□□□□ -0.97
CDT1-203ENST00000569140 EIF5A2Q9GZV4 153 aaKnown RBP8.99□□□□□ -0.97
CDT1-203ENST00000569140 PLECQ15149 4684 aaKnown RBP8.99□□□□□ -0.97
CDT1-203ENST00000569140 RYR2Q92736 4967 aa8.98□□□□□ -0.97
CDT1-203ENST00000569140 RBFOX3A6NFN3 312 aa8.98□□□□□ -0.97
CDT1-203ENST00000569140 KRBOX1C9JBD0 128 aa8.98□□□□□ -0.97
CDT1-203ENST00000569140 RASL10AQ92737 203 aa8.98□□□□□ -0.97
CDT1-203ENST00000569140 DAZAP1Q96EP5 407 aaKnown RBP8.98□□□□□ -0.97
CDT1-203ENST00000569140 C18orf15Q96N68 181 aa8.98□□□□□ -0.97
CDT1-203ENST00000569140 TRAV4A0A0B4J268 109 aa8.97□□□□□ -0.97
CDT1-203ENST00000569140 PAX4O43316 350 aa8.97□□□□□ -0.97
CDT1-203ENST00000569140 RNASE3P12724 160 aaKnown RBP8.97□□□□□ -0.97
CDT1-203ENST00000569140 RPL19P84098 196 aaKnown RBP8.97□□□□□ -0.97
CDT1-203ENST00000569140 LINC01559Q495D7 138 aa8.97□□□□□ -0.97
CDT1-203ENST00000569140 TEX261Q6UWH6 196 aa8.97□□□□□ -0.97
CDT1-203ENST00000569140 COX8CQ7Z4L0 72 aa8.97□□□□□ -0.97
CDT1-203ENST00000569140 ZNF479Q96JC4 524 aa8.97□□□□□ -0.97
CDT1-203ENST00000569140 C9orf85Q96MD7 179 aa8.97□□□□□ -0.97
CDT1-203ENST00000569140 IGHV3-73A0A0B4J1V6 119 aa8.96□□□□□ -0.98
CDT1-203ENST00000569140 PGPEP1LA6NFU8 196 aa8.96□□□□□ -0.98
CDT1-203ENST00000569140 ZNF506Q5JVG8 444 aa8.96□□□□□ -0.98
CDT1-203ENST00000569140 POM121L12Q8N7R1 296 aa8.96□□□□□ -0.98
CDT1-203ENST00000569140 MLST8Q9BVC4 326 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms