RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 UPK3BQ9BT76 320 aa12.53□□□□□ -0.4
SIN3A-212ENST00000568919 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.41
SIN3A-212ENST00000568919 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
SIN3A-212ENST00000568919 ZNF479Q96JC4 524 aa12.52□□□□□ -0.41
SIN3A-212ENST00000568919 KCNS1Q96KK3 526 aa12.52□□□□□ -0.41
SIN3A-212ENST00000568919 MRPS16Q9Y3D3 137 aaKnown RBP12.52□□□□□ -0.41
SIN3A-212ENST00000568919 M0R2P5 195 aa12.51□□□□□ -0.41
SIN3A-212ENST00000568919 TYMSP04818 313 aa12.51□□□□□ -0.41
SIN3A-212ENST00000568919 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
SIN3A-212ENST00000568919 FLI1Q01543 452 aaPredicted RBP12.51□□□□□ -0.41
SIN3A-212ENST00000568919 PRNTQ86SH4 94 aa12.51□□□□□ -0.41
SIN3A-212ENST00000568919 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
SIN3A-212ENST00000568919 CYB561D1Q8N8Q1 229 aa12.51□□□□□ -0.41
SIN3A-212ENST00000568919 SDF2L1Q9HCN8 221 aa12.51□□□□□ -0.41
SIN3A-212ENST00000568919 ICOSQ9Y6W8 199 aa12.51□□□□□ -0.41
SIN3A-212ENST00000568919 TRGV4A0A0C4DH28 118 aa12.5□□□□□ -0.41
SIN3A-212ENST00000568919 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
SIN3A-212ENST00000568919 TMEM75Q8N9X5 138 aa12.5□□□□□ -0.41
SIN3A-212ENST00000568919 LINC00479Q96M42 142 aa12.5□□□□□ -0.41
SIN3A-212ENST00000568919 C11orf21Q9P2W6 132 aa12.5□□□□□ -0.41
SIN3A-212ENST00000568919 GCGP01275 180 aa12.49□□□□□ -0.41
SIN3A-212ENST00000568919 UBE2G2P60604 165 aa12.49□□□□□ -0.41
SIN3A-212ENST00000568919 SMUG1Q53HV7 270 aa12.49□□□□□ -0.41
SIN3A-212ENST00000568919 KCNRGQ8N5I3 272 aa12.49□□□□□ -0.41
SIN3A-212ENST00000568919 PKD1P98161 4303 aa12.49□□□□□ -0.41
SIN3A-212ENST00000568919 TRAV4A0A0B4J268 109 aa12.48□□□□□ -0.41
SIN3A-212ENST00000568919 TRAV34A0A0B4J273 112 aa12.48□□□□□ -0.41
SIN3A-212ENST00000568919 FBLL1A6NHQ2 334 aaKnown RBP12.48□□□□□ -0.41
SIN3A-212ENST00000568919 FAM74A7A6NL05 159 aa12.48□□□□□ -0.41
SIN3A-212ENST00000568919 IFNA7P01567 189 aa12.48□□□□□ -0.41
SIN3A-212ENST00000568919 MRPL23Q16540 153 aaKnown RBP12.48□□□□□ -0.41
SIN3A-212ENST00000568919 SAPCD1Q5SSQ6 148 aa12.48□□□□□ -0.41
SIN3A-212ENST00000568919 OR11H4Q8NGC9 324 aa12.48□□□□□ -0.41
SIN3A-212ENST00000568919 KRTAP1-5Q9BYS1 174 aa12.48□□□□□ -0.41
SIN3A-212ENST00000568919 PFN1P07737 140 aaKnown RBP12.47□□□□□ -0.41
SIN3A-212ENST00000568919 TNP2Q05952 138 aa12.47□□□□□ -0.41
SIN3A-212ENST00000568919 OR4C5Q8NGB2 326 aa12.47□□□□□ -0.41
SIN3A-212ENST00000568919 NKX6-2Q9C056 277 aaPredicted RBP12.47□□□□□ -0.41
SIN3A-212ENST00000568919 MAP1LC3B2A6NCE7 125 aa12.46□□□□□ -0.41
SIN3A-212ENST00000568919 HMSDA8MTL9 139 aa12.46□□□□□ -0.41
SIN3A-212ENST00000568919 ZNF345Q14585 488 aa12.46□□□□□ -0.41
SIN3A-212ENST00000568919 ZFP69Q49AA0 526 aa12.46□□□□□ -0.41
SIN3A-212ENST00000568919 TTC32Q5I0X7 151 aa12.46□□□□□ -0.41
SIN3A-212ENST00000568919 LYPD5Q6UWN5 251 aa12.46□□□□□ -0.41
SIN3A-212ENST00000568919 MAP1LC3BQ9GZQ8 125 aa12.46□□□□□ -0.41
SIN3A-212ENST00000568919 A0A1W2PPQ1 181 aa12.45□□□□□ -0.42
SIN3A-212ENST00000568919 K7EQD1 137 aa12.45□□□□□ -0.42
SIN3A-212ENST00000568919 PEX7O00628 323 aa12.45□□□□□ -0.42
SIN3A-212ENST00000568919 FHITP49789 147 aa12.45□□□□□ -0.42
SIN3A-212ENST00000568919 A0A0D9SG52 128 aa12.44□□□□□ -0.42
SIN3A-212ENST00000568919 C9JCJ5 164 aa12.44□□□□□ -0.42
SIN3A-212ENST00000568919 PPT1P50897 306 aa12.44□□□□□ -0.42
SIN3A-212ENST00000568919 NEGR1Q7Z3B1 354 aa12.44□□□□□ -0.42
SIN3A-212ENST00000568919 HIST1H2BAQ96A08 127 aa12.44□□□□□ -0.42
SIN3A-212ENST00000568919 ARL2-SNX15V9GYD0 113 aa12.44□□□□□ -0.42
SIN3A-212ENST00000568919 KIAA1109Q2LD37 5005 aa12.44□□□□□ -0.42
SIN3A-212ENST00000568919 PKHD1P08F94 4074 aa12.43□□□□□ -0.42
SIN3A-212ENST00000568919 FABP5P3A8MUU1 101 aa12.43□□□□□ -0.42
SIN3A-212ENST00000568919 SIVA1O15304 175 aa12.43□□□□□ -0.42
SIN3A-212ENST00000568919 ORM1P02763 201 aa12.43□□□□□ -0.42
SIN3A-212ENST00000568919 SEC11BP0C7V7 166 aa12.43□□□□□ -0.42
SIN3A-212ENST00000568919 GYPEP15421 78 aa12.43□□□□□ -0.42
SIN3A-212ENST00000568919 ZNF876PQ49A33 203 aa12.43□□□□□ -0.42
SIN3A-212ENST00000568919 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
SIN3A-212ENST00000568919 C9orf85Q96MD7 179 aa12.43□□□□□ -0.42
SIN3A-212ENST00000568919 HERC2O95714 4834 aa12.42□□□□□ -0.42
SIN3A-212ENST00000568919 DYNC1H1Q14204 4646 aaKnown RBP12.42□□□□□ -0.42
SIN3A-212ENST00000568919 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
SIN3A-212ENST00000568919 NXPH4O95158 308 aa12.42□□□□□ -0.42
SIN3A-212ENST00000568919 SRIP30626 198 aa12.42□□□□□ -0.42
SIN3A-212ENST00000568919 DPPA3Q6W0C5 159 aa12.42□□□□□ -0.42
SIN3A-212ENST00000568919 KANTRA0A1W2PQU2 76 aa12.41□□□□□ -0.42
SIN3A-212ENST00000568919 PGPEP1LA6NFU8 196 aa12.41□□□□□ -0.42
SIN3A-212ENST00000568919 RS1O15537 224 aa12.41□□□□□ -0.42
SIN3A-212ENST00000568919 BCL2L11O43521 198 aa12.41□□□□□ -0.42
SIN3A-212ENST00000568919 RNASE3P12724 160 aaKnown RBP12.41□□□□□ -0.42
SIN3A-212ENST00000568919 GATA1P15976 413 aaPredicted RBP12.41□□□□□ -0.42
SIN3A-212ENST00000568919 Q86TA4 180 aa12.41□□□□□ -0.42
SIN3A-212ENST00000568919 PCNPQ8WW12 178 aaKnown RBP12.41□□□□□ -0.42
SIN3A-212ENST00000568919 MBD3L1Q8WWY6 194 aa12.41□□□□□ -0.42
SIN3A-212ENST00000568919 PTH2Q96A98 100 aa12.41□□□□□ -0.42
SIN3A-212ENST00000568919 ZNF471Q9BX82 626 aaPredicted RBP12.41□□□□□ -0.42
SIN3A-212ENST00000568919 LOC100131303A0A0U1RQF7 123 aa12.4□□□□□ -0.42
SIN3A-212ENST00000568919 UMAD1C9J7I0 102 aa12.4□□□□□ -0.42
SIN3A-212ENST00000568919 BTF3P20290 206 aaKnown RBP12.4□□□□□ -0.42
SIN3A-212ENST00000568919 CRIP1P50238 77 aa12.4□□□□□ -0.42
SIN3A-212ENST00000568919 CFAP126Q5VTH2 177 aa12.4□□□□□ -0.42
SIN3A-212ENST00000568919 CST9LP1Q5W188 147 aa12.4□□□□□ -0.42
SIN3A-212ENST00000568919 SFT2D1Q8WV19 159 aa12.4□□□□□ -0.42
SIN3A-212ENST00000568919 ZFP30Q9Y2G7 519 aa12.4□□□□□ -0.42
SIN3A-212ENST00000568919 DNAH11Q96DT5 4516 aa12.4□□□□□ -0.43
SIN3A-212ENST00000568919 CIDEAO60543 219 aa12.39□□□□□ -0.43
SIN3A-212ENST00000568919 PAGE4O60829 102 aa12.39□□□□□ -0.43
SIN3A-212ENST00000568919 MED14OSP0DP75 135 aa12.39□□□□□ -0.43
SIN3A-212ENST00000568919 COX8CQ7Z4L0 72 aa12.39□□□□□ -0.43
SIN3A-212ENST00000568919 ZNF575Q86XF7 245 aa12.39□□□□□ -0.43
SIN3A-212ENST00000568919 FAM213BQ8TBF2 198 aa12.39□□□□□ -0.43
SIN3A-212ENST00000568919 TXNDC17Q9BRA2 123 aa12.39□□□□□ -0.43
SIN3A-212ENST00000568919 ZNF506Q5JVG8 444 aa12.38□□□□□ -0.43
SIN3A-212ENST00000568919 TMUB2Q71RG4 321 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms