RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 GAGE12FP0CL80 117 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 GAGE12GP0CL81 117 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 GAGE12IP0CL82 117 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 ZNF80P51504 273 aaPredicted RBP12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 NKX2-5P52952 324 aaPredicted RBP12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 FAM159AQ6UWV7 190 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 Q6ZTI0 123 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 Q86TA4 180 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 NDUFAF3Q9BU61 184 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 PKD1P98161 4303 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 TRAV1-1A0A0B4J248 108 aa12.89□□□□□ -0.35
SYNGR3-205ENST00000568896 GCGP01275 180 aa12.89□□□□□ -0.35
SYNGR3-205ENST00000568896 ZNF415Q09FC8 603 aa12.89□□□□□ -0.35
SYNGR3-205ENST00000568896 TMEM183BQ1AE95 376 aa12.89□□□□□ -0.35
SYNGR3-205ENST00000568896 TDRG1Q3Y452 100 aa12.89□□□□□ -0.35
SYNGR3-205ENST00000568896 SMUG1Q53HV7 270 aa12.89□□□□□ -0.35
SYNGR3-205ENST00000568896 SAPCD1Q5SSQ6 148 aa12.89□□□□□ -0.35
SYNGR3-205ENST00000568896 TMEM183AQ8IXX5 376 aa12.89□□□□□ -0.35
SYNGR3-205ENST00000568896 FAM210BQ96KR6 192 aa12.89□□□□□ -0.35
SYNGR3-205ENST00000568896 TRGV11A0A075B6L2 103 aa12.88□□□□□ -0.35
SYNGR3-205ENST00000568896 CCL20P78556 96 aa12.88□□□□□ -0.35
SYNGR3-205ENST00000568896 TMEM88Q6PEY1 159 aa12.88□□□□□ -0.35
SYNGR3-205ENST00000568896 MDFICQ9P1T7 246 aa12.88□□□□□ -0.35
SYNGR3-205ENST00000568896 TRGV1A0A0A0MS02 117 aa12.87□□□□□ -0.35
SYNGR3-205ENST00000568896 F5H768 121 aa12.87□□□□□ -0.35
SYNGR3-205ENST00000568896 SPINK4O60575 86 aa12.87□□□□□ -0.35
SYNGR3-205ENST00000568896 PFN1P07737 140 aaKnown RBP12.87□□□□□ -0.35
SYNGR3-205ENST00000568896 FMC1Q96HJ9 113 aa12.87□□□□□ -0.35
SYNGR3-205ENST00000568896 GNG13Q9P2W3 67 aa12.87□□□□□ -0.35
SYNGR3-205ENST00000568896 C11orf21Q9P2W6 132 aa12.87□□□□□ -0.35
SYNGR3-205ENST00000568896 TEX46H3BTG2 121 aa12.86□□□□□ -0.35
SYNGR3-205ENST00000568896 AKR1C3P42330 323 aa12.86□□□□□ -0.35
SYNGR3-205ENST00000568896 UBE2G1P62253 170 aa12.86□□□□□ -0.35
SYNGR3-205ENST00000568896 MANBALQ9NQG1 85 aa12.86□□□□□ -0.35
SYNGR3-205ENST00000568896 MRPL16Q9NX20 251 aaKnown RBP12.86□□□□□ -0.35
SYNGR3-205ENST00000568896 TRBV6-1A0A0K0K1D8 114 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 A0A1B0GVY2 172 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 SCO2A0A1W2PP80 73 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 GNRH2O43555 120 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 TYMSP04818 313 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 ALKAL2Q6UX46 152 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 KCNS1Q96KK3 526 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 C18orf15Q96N68 181 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 SDF2L1Q9HCN8 221 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 BOLA1Q9Y3E2 137 aa12.85□□□□□ -0.35
SYNGR3-205ENST00000568896 TRGV2A0A075B6R0 118 aa12.84□□□□□ -0.35
SYNGR3-205ENST00000568896 IGHV3-16A0A0C4DH30 117 aa12.84□□□□□ -0.35
SYNGR3-205ENST00000568896 LGALS9BQ3B8N2 356 aa12.84□□□□□ -0.35
SYNGR3-205ENST00000568896 ZFP30Q9Y2G7 519 aa12.84□□□□□ -0.35
SYNGR3-205ENST00000568896 LTAP01374 205 aa12.83□□□□□ -0.36
SYNGR3-205ENST00000568896 HOXA5P20719 270 aa12.83□□□□□ -0.36
SYNGR3-205ENST00000568896 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
SYNGR3-205ENST00000568896 COX8CQ7Z4L0 72 aa12.83□□□□□ -0.36
SYNGR3-205ENST00000568896 ZC2HC1AQ96GY0 325 aa12.83□□□□□ -0.36
SYNGR3-205ENST00000568896 SPXQ9BT56 116 aa12.83□□□□□ -0.36
SYNGR3-205ENST00000568896 ABCA13Q86UQ4 5058 aa12.83□□□□□ -0.36
SYNGR3-205ENST00000568896 M0R2N4 97 aa12.82□□□□□ -0.36
SYNGR3-205ENST00000568896 FABP5P3A8MUU1 101 aa12.81□□□□□ -0.36
SYNGR3-205ENST00000568896 OR5I1Q13606 314 aa12.81□□□□□ -0.36
SYNGR3-205ENST00000568896 C15orf53Q8NAA6 179 aa12.81□□□□□ -0.36
SYNGR3-205ENST00000568896 S100A9P06702 114 aaKnown RBP12.8□□□□□ -0.36
SYNGR3-205ENST00000568896 CRIP1P50238 77 aa12.8□□□□□ -0.36
SYNGR3-205ENST00000568896 POM121L12Q8N7R1 296 aa12.8□□□□□ -0.36
SYNGR3-205ENST00000568896 C11orf52Q96A22 123 aa12.8□□□□□ -0.36
SYNGR3-205ENST00000568896 TRAV26-1A0A087WT03 109 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 IGKV3D-20A0A0C4DH25 116 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 M0R2P5 195 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 RTL8CO15255 209 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 SH2D1AO60880 128 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 IFNA1P01562 189 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 P0DMU3 169 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 FAM231AP0DMU4 169 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 FAM231CP0DMU5 169 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 NHLRC2Q8NBF2 726 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 RASL10AQ92737 203 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 TXNDC17Q9BRA2 123 aa12.79□□□□□ -0.36
SYNGR3-205ENST00000568896 PRSS29PA6NIE9 313 aa12.78□□□□□ -0.36
SYNGR3-205ENST00000568896 IGHV3-53P01767 116 aa12.78□□□□□ -0.36
SYNGR3-205ENST00000568896 BCL2P10415 239 aa12.78□□□□□ -0.36
SYNGR3-205ENST00000568896 MEF2BQ02080 365 aaPredicted RBP12.78□□□□□ -0.36
SYNGR3-205ENST00000568896 FAM162BQ5T6X4 162 aa12.78□□□□□ -0.36
SYNGR3-205ENST00000568896 A0A0J9YY99 117 aa12.77□□□□□ -0.37
SYNGR3-205ENST00000568896 NUDT3O95989 172 aa12.77□□□□□ -0.37
SYNGR3-205ENST00000568896 RPL35P42766 123 aaKnown RBP12.77□□□□□ -0.37
SYNGR3-205ENST00000568896 BLOC1S1P78537 153 aa12.77□□□□□ -0.37
SYNGR3-205ENST00000568896 ZNF674Q2M3X9 581 aa12.77□□□□□ -0.37
SYNGR3-205ENST00000568896 C9orf85Q96MD7 179 aa12.77□□□□□ -0.37
SYNGR3-205ENST00000568896 DERL1Q9BUN8 251 aa12.77□□□□□ -0.37
SYNGR3-205ENST00000568896 M0R036 132 aa12.76□□□□□ -0.37
SYNGR3-205ENST00000568896 ORM1P02763 201 aa12.76□□□□□ -0.37
SYNGR3-205ENST00000568896 MED14OSP0DP75 135 aa12.76□□□□□ -0.37
SYNGR3-205ENST00000568896 RNASE3P12724 160 aaKnown RBP12.76□□□□□ -0.37
SYNGR3-205ENST00000568896 BAGE2Q86Y30 109 aa12.76□□□□□ -0.37
SYNGR3-205ENST00000568896 MLST8Q9BVC4 326 aa12.76□□□□□ -0.37
SYNGR3-205ENST00000568896 VAX2Q9UIW0 290 aa12.76□□□□□ -0.37
SYNGR3-205ENST00000568896 HSPG2P98160 4391 aa12.75□□□□□ -0.37
SYNGR3-205ENST00000568896 B4DEV8 164 aa12.75□□□□□ -0.37
SYNGR3-205ENST00000568896 PDE6DO43924 150 aa12.75□□□□□ -0.37
SYNGR3-205ENST00000568896 VSIG2Q96IQ7 327 aa12.75□□□□□ -0.37
SYNGR3-205ENST00000568896 KRBOX1C9JBD0 128 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms