RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 MED28Q9H204 178 aa9.89□□□□□ -0.83
USB1-214ENST00000568848 KCNIP2Q9NS61 270 aa9.89□□□□□ -0.83
USB1-214ENST00000568848 PRELID1Q9Y255 219 aa9.89□□□□□ -0.83
USB1-214ENST00000568848 KRTAP29-1A8MX34 341 aaPredicted RBP9.88□□□□□ -0.83
USB1-214ENST00000568848 OR7C2O60412 319 aa9.88□□□□□ -0.83
USB1-214ENST00000568848 TMEM183BQ1AE95 376 aa9.88□□□□□ -0.83
USB1-214ENST00000568848 C9orf47Q6ZRZ4 202 aa9.88□□□□□ -0.83
USB1-214ENST00000568848 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
USB1-214ENST00000568848 PCNPQ8WW12 178 aaKnown RBP9.88□□□□□ -0.83
USB1-214ENST00000568848 AAMDCQ9H7C9 122 aa9.88□□□□□ -0.83
USB1-214ENST00000568848 Q5BKY6 102 aa9.87□□□□□ -0.83
USB1-214ENST00000568848 ZNF492Q9P255 531 aa9.87□□□□□ -0.83
USB1-214ENST00000568848 NAGKQ9UJ70 344 aa9.87□□□□□ -0.83
USB1-214ENST00000568848 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.86□□□□□ -0.83
USB1-214ENST00000568848 RANP62826 216 aaKnown RBP9.86□□□□□ -0.83
USB1-214ENST00000568848 TMEM78Q5T7P6 136 aa9.86□□□□□ -0.83
USB1-214ENST00000568848 NHLRC2Q8NBF2 726 aa9.86□□□□□ -0.83
USB1-214ENST00000568848 OR10G4Q8NGN3 311 aa9.86□□□□□ -0.83
USB1-214ENST00000568848 IGHV3-38A0A0C4DH36 116 aa9.85□□□□□ -0.83
USB1-214ENST00000568848 GNRH2O43555 120 aa9.85□□□□□ -0.83
USB1-214ENST00000568848 PPT1P50897 306 aa9.85□□□□□ -0.83
USB1-214ENST00000568848 RAB2AP61019 212 aa9.85□□□□□ -0.83
USB1-214ENST00000568848 SLAQ13239 276 aa9.85□□□□□ -0.83
USB1-214ENST00000568848 ZNF138P52744 262 aa9.84□□□□□ -0.83
USB1-214ENST00000568848 KRTAP10-4P60372 401 aaPredicted RBP9.84□□□□□ -0.83
USB1-214ENST00000568848 UBE2L3P68036 154 aaKnown RBP9.84□□□□□ -0.83
USB1-214ENST00000568848 ACOT6Q3I5F7 207 aaPredicted RBP9.84□□□□□ -0.83
USB1-214ENST00000568848 NTN5Q8WTR8 489 aaPredicted RBP9.84□□□□□ -0.83
USB1-214ENST00000568848 IGHV3-73A0A0B4J1V6 119 aa9.83□□□□□ -0.84
USB1-214ENST00000568848 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
USB1-214ENST00000568848 HMGB3O15347 200 aaKnown RBP9.83□□□□□ -0.84
USB1-214ENST00000568848 PLA2G1BP04054 148 aaKnown RBP9.83□□□□□ -0.84
USB1-214ENST00000568848 TAS2R45P59539 299 aa9.83□□□□□ -0.84
USB1-214ENST00000568848 KHDC3LQ587J8 217 aa9.83□□□□□ -0.84
USB1-214ENST00000568848 SCXQ7RTU7 201 aa9.83□□□□□ -0.84
USB1-214ENST00000568848 HSD17B11Q8NBQ5 300 aa9.83□□□□□ -0.84
USB1-214ENST00000568848 OR4C5Q8NGB2 326 aa9.83□□□□□ -0.84
USB1-214ENST00000568848 DNAJC30Q96LL9 226 aa9.83□□□□□ -0.84
USB1-214ENST00000568848 A0A1W2PPV4 95 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 C9JCJ5 164 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 CSN1S1P47710 185 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 OR10J3Q5JRS4 329 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 Q6ZSA8 131 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 IQCF2Q8IXL9 164 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 C10orf126Q8N4M7 172 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 OR10G9Q8NGN4 311 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 OR10G7Q8NGN6 311 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 RASL10AQ92737 203 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 HYLS1Q96M11 299 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 AQP10Q96PS8 301 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 TXNDC17Q9BRA2 123 aa9.82□□□□□ -0.84
USB1-214ENST00000568848 TRAV4A0A0B4J268 109 aa9.81□□□□□ -0.84
USB1-214ENST00000568848 PGPA6NDG6 321 aa9.81□□□□□ -0.84
USB1-214ENST00000568848 F6UZH7 168 aa9.81□□□□□ -0.84
USB1-214ENST00000568848 ORM1P02763 201 aa9.81□□□□□ -0.84
USB1-214ENST00000568848 GIPP09681 153 aaPredicted RBP9.81□□□□□ -0.84
USB1-214ENST00000568848 ZNF266Q14584 549 aa9.81□□□□□ -0.84
USB1-214ENST00000568848 DEFB104AQ8WTQ1 72 aa9.81□□□□□ -0.84
USB1-214ENST00000568848 RPH3ALQ9UNE2 315 aa9.81□□□□□ -0.84
USB1-214ENST00000568848 DIRC3C9JPN6 131 aa9.8□□□□□ -0.84
USB1-214ENST00000568848 NMBP08949 121 aa9.8□□□□□ -0.84
USB1-214ENST00000568848 ATP6V0CP27449 155 aa9.8□□□□□ -0.84
USB1-214ENST00000568848 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
USB1-214ENST00000568848 FXYD6-FXYD2A0A087WZ82 144 aa9.79□□□□□ -0.84
USB1-214ENST00000568848 RBAKDNA6NC62 111 aa9.79□□□□□ -0.84
USB1-214ENST00000568848 RNF222A6NCQ9 220 aa9.79□□□□□ -0.84
USB1-214ENST00000568848 GATA1P15976 413 aaPredicted RBP9.79□□□□□ -0.84
USB1-214ENST00000568848 RGS21Q2M5E4 152 aa9.79□□□□□ -0.84
USB1-214ENST00000568848 PQLC2Q6ZP29 291 aa9.79□□□□□ -0.84
USB1-214ENST00000568848 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
USB1-214ENST00000568848 SH3BGRL3Q9H299 93 aa9.79□□□□□ -0.84
USB1-214ENST00000568848 OTORQ9NRC9 128 aa9.79□□□□□ -0.84
USB1-214ENST00000568848 PLA2G2DQ9UNK4 145 aa9.79□□□□□ -0.84
USB1-214ENST00000568848 TYMSP04818 313 aa9.78□□□□□ -0.84
USB1-214ENST00000568848 ARL14EPLP0DKL9 152 aa9.78□□□□□ -0.84
USB1-214ENST00000568848 CDC34P49427 236 aaPredicted RBP9.78□□□□□ -0.84
USB1-214ENST00000568848 HNRNPA3P51991 378 aaKnown RBP9.78□□□□□ -0.84
USB1-214ENST00000568848 Q6AWC8 147 aa9.78□□□□□ -0.84
USB1-214ENST00000568848 FAM159AQ6UWV7 190 aa9.78□□□□□ -0.84
USB1-214ENST00000568848 SLC25A29Q8N8R3 303 aa9.78□□□□□ -0.84
USB1-214ENST00000568848 OR2T35Q8NGX2 323 aa9.78□□□□□ -0.84
USB1-214ENST00000568848 RAB24Q969Q5 203 aa9.78□□□□□ -0.84
USB1-214ENST00000568848 TVP23CQ96ET8 276 aa9.78□□□□□ -0.84
USB1-214ENST00000568848 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 K7EP13 123 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 GNG5P63218 68 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 RPL7L1Q6DKI1 246 aaKnown RBP9.77□□□□□ -0.85
USB1-214ENST00000568848 GOLT1AQ6ZVE7 132 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 DAZ4Q86SG3 579 aaKnown RBP9.77□□□□□ -0.85
USB1-214ENST00000568848 INO80EQ8NBZ0 244 aaPredicted RBP9.77□□□□□ -0.85
USB1-214ENST00000568848 OR2G3Q8NGZ4 309 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 CMTM2Q8TAZ6 248 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 SGK494Q96LW2 274 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 SPXQ9BT56 116 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 PSMG3Q9BT73 122 aaPredicted RBP9.77□□□□□ -0.85
USB1-214ENST00000568848 DAZ3Q9NR90 486 aaKnown RBP9.77□□□□□ -0.85
USB1-214ENST00000568848 Q9UF83 564 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 TNFSF18Q9UNG2 199 aa9.77□□□□□ -0.85
USB1-214ENST00000568848 TRAV8-1A0A0A6YYK1 113 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms