RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 SPXQ9BT56 116 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 BATF3Q9NR55 127 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 C9JCJ5 164 aa8.34□□□□□ -1.07
GTF3C1-208ENST00000567843 STAG3L2P0CL84 134 aa8.34□□□□□ -1.07
GTF3C1-208ENST00000567843 STAG3L3P0CL85 134 aa8.34□□□□□ -1.07
GTF3C1-208ENST00000567843 GCHFRP30047 84 aa8.34□□□□□ -1.07
GTF3C1-208ENST00000567843 ZNF80P51504 273 aaPredicted RBP8.34□□□□□ -1.07
GTF3C1-208ENST00000567843 WFDC10BQ8IUB3 73 aa8.34□□□□□ -1.07
GTF3C1-208ENST00000567843 TMEM75Q8N9X5 138 aa8.34□□□□□ -1.07
GTF3C1-208ENST00000567843 PCNPQ8WW12 178 aaKnown RBP8.34□□□□□ -1.07
GTF3C1-208ENST00000567843 C11orf21Q9P2W6 132 aa8.34□□□□□ -1.07
GTF3C1-208ENST00000567843 M0R2P5 195 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 PTTG1O95997 202 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 TCRAP04437 139 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 SUMO1P63165 101 aaKnown RBP8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 TDRG1Q3Y452 100 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 RPL7L1Q6DKI1 246 aaKnown RBP8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 PRNTQ86SH4 94 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 MAPKAPK5-AS1Q8N8E1 139 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 OR2G3Q8NGZ4 309 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 ASB13Q8WXK3 278 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 AQP10Q96PS8 301 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 SDF2L1Q9HCN8 221 aa8.33□□□□□ -1.08
GTF3C1-208ENST00000567843 FAT1Q14517 4588 aa8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 FXYD6-FXYD2A0A087WZ82 144 aa8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 IGHV3-73A0A0B4J1V6 119 aa8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 TRAV4A0A0B4J268 109 aa8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 GCGP01275 180 aa8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 Q6ZRN7 208 aaPredicted RBP8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 C5orf17Q8NAS9 161 aa8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 NHLRC2Q8NBF2 726 aa8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 NDFIP1Q9BT67 221 aa8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 PSMG3Q9BT73 122 aaPredicted RBP8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 ACTR3CQ9C0K3 210 aaPredicted RBP8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 PSG8Q9UQ74 426 aa8.32□□□□□ -1.08
GTF3C1-208ENST00000567843 TRAV34A0A0B4J273 112 aa8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 RNF222A6NCQ9 220 aa8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 GGTLC3B5MD39 225 aa8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 CDK2AP2O75956 126 aa8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 DNAH10OSP0CZ25 163 aa8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 BTF3P20290 206 aaKnown RBP8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 DPPA3Q6W0C5 159 aa8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 LINC00479Q96M42 142 aa8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 EPDR1Q9UM22 224 aa8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 LY96Q9Y6Y9 160 aa8.31□□□□□ -1.08
GTF3C1-208ENST00000567843 IGLV2-11P01706 119 aa8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 MBP02144 154 aa8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 ORM1P02763 201 aa8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 GIPP09681 153 aaPredicted RBP8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 UBE2G2P60604 165 aa8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 FLI1Q01543 452 aaPredicted RBP8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 ZNF876PQ49A33 203 aa8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 ARL6IP6Q8N6S5 226 aa8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 INO80EQ8NBZ0 244 aaPredicted RBP8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 KCNS1Q96KK3 526 aa8.3□□□□□ -1.08
GTF3C1-208ENST00000567843 K7EQM0 130 aa8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 CXorf1O96002 111 aa8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 GATA1P15976 413 aaPredicted RBP8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 FGF8P55075 233 aaPredicted RBP8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 SERF2P84101 59 aa8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 ZNF726P1Q15940 193 aa8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 CYB561D1Q8N8Q1 229 aa8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 SUN5Q8TC36 379 aa8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 TMEM167BQ9NRX6 74 aa8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 TNFSF18Q9UNG2 199 aa8.29□□□□□ -1.08
GTF3C1-208ENST00000567843 TRAV9-2A0A087WT02 112 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 SERTM2A0A1B0GWG4 89 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 PGPEP1LA6NFU8 196 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 FBLL1A6NHQ2 334 aaKnown RBP8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 TAAR5O14804 337 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 IFNA7P01567 189 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 EVI2AP22794 236 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 PPT1P50897 306 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 ERVFC1-1P60608 527 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 SMUG1Q53HV7 270 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 CFAP126Q5VTH2 177 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 OR2T35Q8NGX2 323 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 TXNDC17Q9BRA2 123 aa8.28□□□□□ -1.08
GTF3C1-208ENST00000567843 BORCS7-ASMTA0A0B4J1R7 106 aa8.27□□□□□ -1.09
GTF3C1-208ENST00000567843 SMLR1H3BR10 107 aa8.27□□□□□ -1.09
GTF3C1-208ENST00000567843 RS1O15537 224 aa8.27□□□□□ -1.09
GTF3C1-208ENST00000567843 CRYGDP07320 174 aa8.27□□□□□ -1.09
GTF3C1-208ENST00000567843 PFN1P07737 140 aaKnown RBP8.27□□□□□ -1.09
GTF3C1-208ENST00000567843 ZFP69Q49AA0 526 aa8.27□□□□□ -1.09
GTF3C1-208ENST00000567843 SLC25A29Q8N8R3 303 aa8.27□□□□□ -1.09
GTF3C1-208ENST00000567843 SCRT2Q9NQ03 307 aa8.27□□□□□ -1.09
GTF3C1-208ENST00000567843 MSRB1Q9NZV6 116 aa8.27□□□□□ -1.09
GTF3C1-208ENST00000567843 A0A087WTM6 91 aa8.26□□□□□ -1.09
GTF3C1-208ENST00000567843 CTXND1A0A1B0GTU2 59 aa8.26□□□□□ -1.09
GTF3C1-208ENST00000567843 EREGO14944 169 aa8.26□□□□□ -1.09
GTF3C1-208ENST00000567843 ARPC5O15511 151 aa8.26□□□□□ -1.09
GTF3C1-208ENST00000567843 RNASE3P12724 160 aaKnown RBP8.26□□□□□ -1.09
GTF3C1-208ENST00000567843 ZNF506Q5JVG8 444 aa8.26□□□□□ -1.09
GTF3C1-208ENST00000567843 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
GTF3C1-208ENST00000567843 C9orf85Q96MD7 179 aa8.26□□□□□ -1.09
GTF3C1-208ENST00000567843 ARL2-SNX15V9GYD0 113 aa8.26□□□□□ -1.09
GTF3C1-208ENST00000567843 IGKV3D-20A0A0C4DH25 116 aa8.25□□□□□ -1.09
GTF3C1-208ENST00000567843 A0A1W2PRE2 83 aa8.25□□□□□ -1.09
GTF3C1-208ENST00000567843 G3V3Q6 166 aa8.25□□□□□ -1.09
GTF3C1-208ENST00000567843 OR10J3Q5JRS4 329 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms