RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 ZNF324O75467 553 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-207ENST00000567806 RANP62826 216 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-207ENST00000567806 ANXA2RQ3ZCQ2 193 aa12.97□□□□□ -0.33
GTF3C1-207ENST00000567806 C18orf15Q96N68 181 aa12.97□□□□□ -0.33
GTF3C1-207ENST00000567806 LINC00467Q9BRT7 94 aa12.97□□□□□ -0.33
GTF3C1-207ENST00000567806 AGPAT4-IT1Q9H0P7 198 aa12.97□□□□□ -0.33
GTF3C1-207ENST00000567806 MANBALQ9NQG1 85 aa12.97□□□□□ -0.33
GTF3C1-207ENST00000567806 FBLL1A6NHQ2 334 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-207ENST00000567806 KLLNB2CW77 178 aa12.96□□□□□ -0.33
GTF3C1-207ENST00000567806 F6UZH7 168 aa12.96□□□□□ -0.33
GTF3C1-207ENST00000567806 GPX1P07203 203 aa12.96□□□□□ -0.33
GTF3C1-207ENST00000567806 FHITP49789 147 aa12.96□□□□□ -0.33
GTF3C1-207ENST00000567806 KRTAP10-2P60368 255 aa12.96□□□□□ -0.33
GTF3C1-207ENST00000567806 BTN1A1Q13410 526 aa12.96□□□□□ -0.33
GTF3C1-207ENST00000567806 C11orf72Q8NBR9 251 aa12.96□□□□□ -0.33
GTF3C1-207ENST00000567806 NDUFB4O95168 129 aa12.95□□□□□ -0.34
GTF3C1-207ENST00000567806 RAB14P61106 215 aa12.95□□□□□ -0.34
GTF3C1-207ENST00000567806 ICAM4Q14773 271 aa12.95□□□□□ -0.34
GTF3C1-207ENST00000567806 C5orf17Q8NAS9 161 aa12.95□□□□□ -0.34
GTF3C1-207ENST00000567806 FAM19A4Q96LR4 140 aa12.95□□□□□ -0.34
GTF3C1-207ENST00000567806 KLF12Q9Y4X4 402 aa12.95□□□□□ -0.34
GTF3C1-207ENST00000567806 DNAH5Q8TE73 4624 aa12.95□□□□□ -0.34
GTF3C1-207ENST00000567806 RBAKDNA6NC62 111 aa12.94□□□□□ -0.34
GTF3C1-207ENST00000567806 RGS13O14921 159 aa12.94□□□□□ -0.34
GTF3C1-207ENST00000567806 SIVA1O15304 175 aa12.94□□□□□ -0.34
GTF3C1-207ENST00000567806 PAX4O43316 350 aa12.94□□□□□ -0.34
GTF3C1-207ENST00000567806 SPINK4O60575 86 aa12.94□□□□□ -0.34
GTF3C1-207ENST00000567806 TMEM78Q5T7P6 136 aa12.94□□□□□ -0.34
GTF3C1-207ENST00000567806 EXOC3-AS1Q8N2X6 119 aa12.94□□□□□ -0.34
GTF3C1-207ENST00000567806 PGPA6NDG6 321 aa12.93□□□□□ -0.34
GTF3C1-207ENST00000567806 NMBP08949 121 aa12.93□□□□□ -0.34
GTF3C1-207ENST00000567806 FGF8P55075 233 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-207ENST00000567806 TCL1AP56279 114 aa12.93□□□□□ -0.34
GTF3C1-207ENST00000567806 LINC00315P59091 139 aa12.93□□□□□ -0.34
GTF3C1-207ENST00000567806 C9orf47Q6ZRZ4 202 aa12.93□□□□□ -0.34
GTF3C1-207ENST00000567806 ICOSQ9Y6W8 199 aa12.93□□□□□ -0.34
GTF3C1-207ENST00000567806 APOBP04114 4563 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-207ENST00000567806 EREGO14944 169 aa12.92□□□□□ -0.34
GTF3C1-207ENST00000567806 CRISP2P16562 243 aa12.92□□□□□ -0.34
GTF3C1-207ENST00000567806 SLAQ13239 276 aa12.92□□□□□ -0.34
GTF3C1-207ENST00000567806 IBA57Q5T440 356 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-207ENST00000567806 HIST1H2BAQ96A08 127 aa12.92□□□□□ -0.34
GTF3C1-207ENST00000567806 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-207ENST00000567806 TRBV7-9A0A0J9YWB2 115 aa12.91□□□□□ -0.34
GTF3C1-207ENST00000567806 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-207ENST00000567806 IGHV3-53P01767 116 aa12.91□□□□□ -0.34
GTF3C1-207ENST00000567806 SUMO1P63165 101 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-207ENST00000567806 VGLL1Q99990 258 aa12.91□□□□□ -0.34
GTF3C1-207ENST00000567806 PGPEP1Q9NXJ5 209 aa12.91□□□□□ -0.34
GTF3C1-207ENST00000567806 PRO0255Q9UI72 69 aa12.91□□□□□ -0.34
GTF3C1-207ENST00000567806 TP53TG3Q9ULZ0 132 aa12.91□□□□□ -0.34
GTF3C1-207ENST00000567806 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
GTF3C1-207ENST00000567806 FAM74A7A6NL05 159 aa12.9□□□□□ -0.34
GTF3C1-207ENST00000567806 NXPH4O95158 308 aa12.9□□□□□ -0.34
GTF3C1-207ENST00000567806 CST9LP1Q5W188 147 aa12.9□□□□□ -0.34
GTF3C1-207ENST00000567806 LYPD6BQ8NI32 183 aa12.9□□□□□ -0.34
GTF3C1-207ENST00000567806 MRPL16Q9NX20 251 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-207ENST00000567806 HHLA3Q9XRX5 114 aa12.9□□□□□ -0.34
GTF3C1-207ENST00000567806 LENEPQ9Y5L5 61 aa12.9□□□□□ -0.34
GTF3C1-207ENST00000567806 ZFAND2AQ8N6M9 145 aa12.89□□□□□ -0.35
GTF3C1-207ENST00000567806 ZNF492Q9P255 531 aa12.89□□□□□ -0.35
GTF3C1-207ENST00000567806 DIRC3C9JPN6 131 aa12.88□□□□□ -0.35
GTF3C1-207ENST00000567806 NDUFS6O75380 124 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-207ENST00000567806 EIF3GO75821 320 aaKnown RBP eCLIP12.88□□□□□ -0.35
GTF3C1-207ENST00000567806 S100A9P06702 114 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-207ENST00000567806 ZNF138P52744 262 aa12.88□□□□□ -0.35
GTF3C1-207ENST00000567806 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-207ENST00000567806 Q6ZRN7 208 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-207ENST00000567806 GNG13Q9P2W3 67 aa12.88□□□□□ -0.35
GTF3C1-207ENST00000567806 EPDR1Q9UM22 224 aa12.88□□□□□ -0.35
GTF3C1-207ENST00000567806 TRAV9-2A0A087WT02 112 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 PDE6DO43924 150 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 PAGE4O60829 102 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 CRYBA4P53673 196 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 UBE2G2P60604 165 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 ERVFC1-1P60608 527 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 PRR9Q5T870 116 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 LYPD5Q6UWN5 251 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 CYB561D1Q8N8Q1 229 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 C8orf49Q96NF6 230 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 VAX2Q9UIW0 290 aa12.87□□□□□ -0.35
GTF3C1-207ENST00000567806 TCRAP04437 139 aa12.86□□□□□ -0.35
GTF3C1-207ENST00000567806 ZNF415Q09FC8 603 aa12.86□□□□□ -0.35
GTF3C1-207ENST00000567806 FHL2Q14192 279 aa12.86□□□□□ -0.35
GTF3C1-207ENST00000567806 Q6ZQT7 251 aa12.86□□□□□ -0.35
GTF3C1-207ENST00000567806 NEGR1Q7Z3B1 354 aa12.86□□□□□ -0.35
GTF3C1-207ENST00000567806 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
GTF3C1-207ENST00000567806 TRGV4A0A0C4DH28 118 aa12.85□□□□□ -0.35
GTF3C1-207ENST00000567806 A0A1B0GV50 99 aa12.85□□□□□ -0.35
GTF3C1-207ENST00000567806 GGTLC3B5MD39 225 aa12.85□□□□□ -0.35
GTF3C1-207ENST00000567806 BCL2P10415 239 aa12.85□□□□□ -0.35
GTF3C1-207ENST00000567806 MEF2BQ02080 365 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-207ENST00000567806 SMDT1Q9H4I9 107 aa12.85□□□□□ -0.35
GTF3C1-207ENST00000567806 TNFRSF18Q9Y5U5 241 aa12.85□□□□□ -0.35
GTF3C1-207ENST00000567806 SAPCD1Q5SSQ6 148 aa12.84□□□□□ -0.35
GTF3C1-207ENST00000567806 TMEM75Q8N9X5 138 aa12.84□□□□□ -0.35
GTF3C1-207ENST00000567806 EPM2AB3EWF7 344 aa12.83□□□□□ -0.36
GTF3C1-207ENST00000567806 PEX7O00628 323 aa12.83□□□□□ -0.36
GTF3C1-207ENST00000567806 UBE2G1P62253 170 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms