RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 HYLS1Q96M11 299 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 UPK3BQ9BT76 320 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 Q9H8V8 135 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 TP53TG3Q9ULZ0 132 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 TRGV11A0A075B6L2 103 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 A0A096LPF7 62 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 TRAV21A0A0B4J279 112 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 SERTM2A0A1B0GWG4 89 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 A0A1W2PPQ1 181 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 HMGB3O15347 200 aaKnown RBP3.31□□□□□ -1.88
CLK3-219ENST00000567805 EIF3GO75821 320 aaKnown RBP eCLIP3.31□□□□□ -1.88
CLK3-219ENST00000567805 STAG3L2P0CL84 134 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 STAG3L3P0CL85 134 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 ARL14EPLP0DKL9 152 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 MED14OSP0DP75 135 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 BTF3P20290 206 aaKnown RBP3.31□□□□□ -1.88
CLK3-219ENST00000567805 ATP6V0CP27449 155 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 ESRGQ1W209 222 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 TDRG1Q3Y452 100 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 MUC21Q5SSG8 566 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 GOLT1AQ6ZVE7 132 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 HSD17B11Q8NBQ5 300 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 SUN5Q8TC36 379 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 RAB24Q969Q5 203 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 VSIG2Q96IQ7 327 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 SPXQ9BT56 116 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 MRPL16Q9NX20 251 aaKnown RBP3.31□□□□□ -1.88
CLK3-219ENST00000567805 MDFICQ9P1T7 246 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 PRO0255Q9UI72 69 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 RPH3ALQ9UNE2 315 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 MRPS16Q9Y3D3 137 aaKnown RBP3.31□□□□□ -1.88
CLK3-219ENST00000567805 ICOSQ9Y6W8 199 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 HERC2O95714 4834 aa3.31□□□□□ -1.88
CLK3-219ENST00000567805 TRAV8-1A0A0A6YYK1 113 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 BORCS7-ASMTA0A0B4J1R7 106 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 TRGV4A0A0C4DH28 118 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 RNF222A6NCQ9 220 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 FBLL1A6NHQ2 334 aaKnown RBP3.3□□□□□ -1.88
CLK3-219ENST00000567805 K7EQM0 130 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 CXorf1O96002 111 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 IGHV3-53P01767 116 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 TCRAP04437 139 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 GCHFRP30047 84 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 CRYBA4P53673 196 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 GNG5P63218 68 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 FHL2Q14192 279 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 MRPL23Q16540 153 aaKnown RBP3.3□□□□□ -1.88
CLK3-219ENST00000567805 TMEM183BQ1AE95 376 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 RGS21Q2M5E4 152 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 Q5BKY6 102 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 IQCF2Q8IXL9 164 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 TMEM183AQ8IXX5 376 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 C5orf17Q8NAS9 161 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 RASL10AQ92737 203 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 KCNS1Q96KK3 526 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 NDFIP1Q9BT67 221 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 ACTR3CQ9C0K3 210 aaPredicted RBP3.3□□□□□ -1.88
CLK3-219ENST00000567805 SH3BGRL3Q9H299 93 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 SDF2L1Q9HCN8 221 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 TREM1Q9NP99 234 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 TMEM167BQ9NRX6 74 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 NAGKQ9UJ70 344 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 TNFSF18Q9UNG2 199 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 HHLA3Q9XRX5 114 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 HSPG2P98160 4391 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 KIAA1109Q2LD37 5005 aa3.3□□□□□ -1.88
CLK3-219ENST00000567805 FXYD6-FXYD2A0A087WZ82 144 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 TRAV4A0A0B4J268 109 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 IGHV3-16A0A0C4DH30 117 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 CTXND1A0A1B0GTU2 59 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 A0A1W2PRE2 83 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 GGTLC3B5MD39 225 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 F6UZH7 168 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 M0R2P5 195 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 TAAR5O14804 337 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 SIVA1O15304 175 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 GNRH2O43555 120 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 ORM1P02763 201 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 TYMSP04818 313 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 ZFP69Q49AA0 526 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 RPL7L1Q6DKI1 246 aaKnown RBP3.29□□□□□ -1.88
CLK3-219ENST00000567805 NEGR1Q7Z3B1 354 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 CYB561D1Q8N8Q1 229 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 TMEM75Q8N9X5 138 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 OR2T35Q8NGX2 323 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 PCNPQ8WW12 178 aaKnown RBP3.29□□□□□ -1.88
CLK3-219ENST00000567805 TVP23CQ96ET8 276 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 ZNF479Q96JC4 524 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 C8orf49Q96NF6 230 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 KRTAP1-5Q9BYS1 174 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 EPDR1Q9UM22 224 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 PSG8Q9UQ74 426 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 LRP1BQ9NZR2 4599 aa3.29□□□□□ -1.88
CLK3-219ENST00000567805 DNAH5Q8TE73 4624 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 C16orf90A8MZG2 172 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 C9JCJ5 164 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 G3V3Q6 166 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 K7EP13 123 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 K7EQD1 137 aa3.28□□□□□ -1.88
CLK3-219ENST00000567805 CIDEAO60543 219 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms