RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 NACAE9PAV3 2078 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 IGLV2-18A0A075B6J9 118 aa7.74□□□□□ -1.17
CDH3-206ENST00000567674 PFN1P07737 140 aaKnown RBP7.74□□□□□ -1.17
CDH3-206ENST00000567674 FHITP49789 147 aa7.74□□□□□ -1.17
CDH3-206ENST00000567674 PPT1P50897 306 aa7.74□□□□□ -1.17
CDH3-206ENST00000567674 TIRAPP58753 221 aa7.74□□□□□ -1.17
CDH3-206ENST00000567674 FHL2Q14192 279 aa7.74□□□□□ -1.17
CDH3-206ENST00000567674 ZNF345Q14585 488 aa7.74□□□□□ -1.17
CDH3-206ENST00000567674 NEGR1Q7Z3B1 354 aa7.74□□□□□ -1.17
CDH3-206ENST00000567674 COX8CQ7Z4L0 72 aa7.74□□□□□ -1.17
CDH3-206ENST00000567674 SH3BGRL3Q9H299 93 aa7.74□□□□□ -1.17
CDH3-206ENST00000567674 MUC4Q99102 2169 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 TRAV9-2A0A087WT02 112 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 IGHV3-16A0A0C4DH30 117 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 A0A0J9YY99 117 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 HMSDA8MTL9 139 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 UMAD1C9J7I0 102 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 C9JCJ5 164 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 SUMO1P63165 101 aaKnown RBP7.73□□□□□ -1.17
CDH3-206ENST00000567674 SMUG1Q53HV7 270 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 AKR1C8PQ5T2L2 129 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 TXNDC17Q9BRA2 123 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 MDFICQ9P1T7 246 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 ZFP30Q9Y2G7 519 aa7.73□□□□□ -1.17
CDH3-206ENST00000567674 DNAH11Q96DT5 4516 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 FXYD6-FXYD2A0A087WZ82 144 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 TRGV4A0A0C4DH28 118 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 F6UZH7 168 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 SIVA1O15304 175 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 PRB4P10163 310 aaPredicted RBP7.72□□□□□ -1.17
CDH3-206ENST00000567674 EIF5AP63241 154 aaKnown RBP7.72□□□□□ -1.17
CDH3-206ENST00000567674 FLI1Q01543 452 aaPredicted RBP7.72□□□□□ -1.17
CDH3-206ENST00000567674 TMEM183BQ1AE95 376 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 Q5BKY6 102 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
CDH3-206ENST00000567674 NFE4Q86UQ8 179 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 TMEM183AQ8IXX5 376 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 STOML3Q8TAV4 291 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 PSG8Q9UQ74 426 aa7.72□□□□□ -1.17
CDH3-206ENST00000567674 HERC1Q15751 4861 aa7.71□□□□□ -1.18
CDH3-206ENST00000567674 A0A0D9SG52 128 aa7.71□□□□□ -1.18
CDH3-206ENST00000567674 TRBV6-1A0A0K0K1D8 114 aa7.71□□□□□ -1.18
CDH3-206ENST00000567674 IGLV2-11P01706 119 aa7.71□□□□□ -1.18
CDH3-206ENST00000567674 SEC11BP0C7V7 166 aa7.71□□□□□ -1.18
CDH3-206ENST00000567674 MUC21Q5SSG8 566 aa7.71□□□□□ -1.18
CDH3-206ENST00000567674 DNLZQ5SXM8 178 aa7.71□□□□□ -1.18
CDH3-206ENST00000567674 DPPA3Q6W0C5 159 aa7.71□□□□□ -1.18
CDH3-206ENST00000567674 PCNPQ8WW12 178 aaKnown RBP7.71□□□□□ -1.18
CDH3-206ENST00000567674 TVP23CQ96ET8 276 aa7.71□□□□□ -1.18
CDH3-206ENST00000567674 TRBV6-4A0A1B0GX49 114 aa7.7□□□□□ -1.18
CDH3-206ENST00000567674 FABP5P3A8MUU1 101 aa7.7□□□□□ -1.18
CDH3-206ENST00000567674 GGTLC3B5MD39 225 aa7.7□□□□□ -1.18
CDH3-206ENST00000567674 G3V3Q6 166 aa7.7□□□□□ -1.18
CDH3-206ENST00000567674 TYMSP04818 313 aa7.7□□□□□ -1.18
CDH3-206ENST00000567674 S100A9P06702 114 aaKnown RBP7.7□□□□□ -1.18
CDH3-206ENST00000567674 SRIP30626 198 aa7.7□□□□□ -1.18
CDH3-206ENST00000567674 LGALSLQ3ZCW2 172 aaPredicted RBP7.7□□□□□ -1.18
CDH3-206ENST00000567674 LYPD5Q6UWN5 251 aa7.7□□□□□ -1.18
CDH3-206ENST00000567674 KCNRGQ8N5I3 272 aa7.7□□□□□ -1.18
CDH3-206ENST00000567674 OR4C5Q8NGB2 326 aa7.7□□□□□ -1.18
CDH3-206ENST00000567674 MRPL16Q9NX20 251 aaKnown RBP7.7□□□□□ -1.18
CDH3-206ENST00000567674 DYNC1H1Q14204 4646 aaKnown RBP7.7□□□□□ -1.18
CDH3-206ENST00000567674 TRAV8-1A0A0A6YYK1 113 aa7.69□□□□□ -1.18
CDH3-206ENST00000567674 K7EQD1 137 aa7.69□□□□□ -1.18
CDH3-206ENST00000567674 HMGB3O15347 200 aaKnown RBP7.69□□□□□ -1.18
CDH3-206ENST00000567674 GCGP01275 180 aa7.69□□□□□ -1.18
CDH3-206ENST00000567674 ZFP2Q6ZN57 461 aa7.69□□□□□ -1.18
CDH3-206ENST00000567674 Q6ZQT7 251 aa7.69□□□□□ -1.18
CDH3-206ENST00000567674 C10orf126Q8N4M7 172 aa7.69□□□□□ -1.18
CDH3-206ENST00000567674 CYTL1Q9NRR1 136 aa7.69□□□□□ -1.18
CDH3-206ENST00000567674 FAM74A7A6NL05 159 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 ARPC5O15511 151 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 GNRH2O43555 120 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 IFNA7P01567 189 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 MGST1P10620 155 aaKnown RBP7.68□□□□□ -1.18
CDH3-206ENST00000567674 GNG5P63218 68 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 ZNF726P1Q15940 193 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 ZNF876PQ49A33 203 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 MBD3L1Q8WWY6 194 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 FMC1Q96HJ9 113 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 ZNF479Q96JC4 524 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 C9orf85Q96MD7 179 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 C8orf49Q96NF6 230 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 RPH3ALQ9UNE2 315 aa7.68□□□□□ -1.18
CDH3-206ENST00000567674 A8MWV9 139 aa7.67□□□□□ -1.18
CDH3-206ENST00000567674 PEX7O00628 323 aa7.67□□□□□ -1.18
CDH3-206ENST00000567674 RS1O15537 224 aa7.67□□□□□ -1.18
CDH3-206ENST00000567674 DNAH10OSP0CZ25 163 aa7.67□□□□□ -1.18
CDH3-206ENST00000567674 GATA1P15976 413 aaPredicted RBP7.67□□□□□ -1.18
CDH3-206ENST00000567674 PRADC1Q9BSG0 188 aa7.67□□□□□ -1.18
CDH3-206ENST00000567674 IL36BQ9NZH7 164 aa7.67□□□□□ -1.18
CDH3-206ENST00000567674 NAGKQ9UJ70 344 aa7.67□□□□□ -1.18
CDH3-206ENST00000567674 LY96Q9Y6Y9 160 aa7.67□□□□□ -1.18
CDH3-206ENST00000567674 MAP1LC3B2A6NCE7 125 aa7.66□□□□□ -1.18
CDH3-206ENST00000567674 CDK2AP2O75956 126 aa7.66□□□□□ -1.18
CDH3-206ENST00000567674 NXPH4O95158 308 aa7.66□□□□□ -1.18
CDH3-206ENST00000567674 EVI2AP22794 236 aa7.66□□□□□ -1.18
CDH3-206ENST00000567674 RAB5CP51148 216 aa7.66□□□□□ -1.18
CDH3-206ENST00000567674 TNP2Q05952 138 aa7.66□□□□□ -1.18
CDH3-206ENST00000567674 RHOHQ15669 191 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms