RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ZNF506Q5JVG8 444 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 CASC10Q5T4H9 136 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 FAM162BQ5T6X4 162 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 ZFAND6Q6FIF0 208 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 BAGE2Q86Y30 109 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 PHLDA1Q8WV24 401 aaPredicted RBP8.7□□□□□ -1.02
SF3B3-208ENST00000567250 ZC2HC1AQ96GY0 325 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 FAM210AQ96ND0 272 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 EIF5A2Q9GZV4 153 aaKnown RBP8.7□□□□□ -1.02
SF3B3-208ENST00000567250 NOP10Q9NPE3 64 aaKnown RBP8.7□□□□□ -1.02
SF3B3-208ENST00000567250 KLK5Q9Y337 293 aaPredicted RBP8.7□□□□□ -1.02
SF3B3-208ENST00000567250 ZNF80P51504 273 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-208ENST00000567250 Q6ZTC4 211 aa8.69□□□□□ -1.02
SF3B3-208ENST00000567250 ZNF767PQ75MW2 155 aa8.69□□□□□ -1.02
SF3B3-208ENST00000567250 C11orf72Q8NBR9 251 aa8.69□□□□□ -1.02
SF3B3-208ENST00000567250 TYMSP04818 313 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 GNG4P50150 75 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 C12orf74Q32Q52 190 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 CENPWQ5EE01 88 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 CEMP1Q6PRD7 247 aaPredicted RBP8.68□□□□□ -1.02
SF3B3-208ENST00000567250 Q6ZQT7 251 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 SPXQ9BT56 116 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 DERL1Q9BUN8 251 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 BIN3Q9NQY0 253 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 GSN-AS1Q9NRJ2 163 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 TP53TG3Q9ULZ0 132 aa8.68□□□□□ -1.02
SF3B3-208ENST00000567250 DNAH7Q8WXX0 4024 aa8.67□□□□□ -1.02
SF3B3-208ENST00000567250 DEFB131BA0A096LNP1 70 aa8.67□□□□□ -1.02
SF3B3-208ENST00000567250 SH2D1AO60880 128 aa8.67□□□□□ -1.02
SF3B3-208ENST00000567250 ATP5G1P05496 136 aa8.67□□□□□ -1.02
SF3B3-208ENST00000567250 DEFB130BP0DP73 79 aa8.67□□□□□ -1.02
SF3B3-208ENST00000567250 DEFB130AP0DP74 79 aa8.67□□□□□ -1.02
SF3B3-208ENST00000567250 ZNF674Q2M3X9 581 aa8.67□□□□□ -1.02
SF3B3-208ENST00000567250 LGALS9BQ3B8N2 356 aa8.67□□□□□ -1.02
SF3B3-208ENST00000567250 NHLRC2Q8NBF2 726 aa8.67□□□□□ -1.02
SF3B3-208ENST00000567250 TRGV1A0A0A0MS02 117 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 B4DEV8 164 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 C9JCJ5 164 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 SPINK4O60575 86 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 ORM1P02763 201 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 S100A4P26447 101 aaKnown RBP8.66□□□□□ -1.02
SF3B3-208ENST00000567250 ASIPP42127 132 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 TCTAP57738 103 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 PRR27Q6MZM9 219 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 LINC00612Q8N6U2 182 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 PCNPQ8WW12 178 aaKnown RBP8.66□□□□□ -1.02
SF3B3-208ENST00000567250 MLST8Q9BVC4 326 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 PARLQ9H300 379 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 SMDT1Q9H4I9 107 aa8.66□□□□□ -1.02
SF3B3-208ENST00000567250 TRGV2A0A075B6R0 118 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 IGHV3-16A0A0C4DH30 117 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 GAGE12BA1L429 117 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 GAGE7O76087 117 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 GAGE12FP0CL80 117 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 GAGE12GP0CL81 117 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 GAGE12IP0CL82 117 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 MGST1P10620 155 aaKnown RBP8.65□□□□□ -1.02
SF3B3-208ENST00000567250 CEBPGP53567 150 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 OR5I1Q13606 314 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 C18orf15Q96N68 181 aa8.65□□□□□ -1.02
SF3B3-208ENST00000567250 TENM2Q9NT68 2774 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 RAB19A4D1S5 217 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 M0R036 132 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 M0R2P5 195 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 GNRH2O43555 120 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 HTN3P15516 51 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 CRIP1P50238 77 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 PEA15Q15121 130 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 Q6ZTI0 123 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 DAZAP1Q96EP5 407 aaKnown RBP8.64□□□□□ -1.03
SF3B3-208ENST00000567250 FAM210BQ96KR6 192 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 MDFICQ9P1T7 246 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 C11orf21Q9P2W6 132 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 CSMD3Q7Z407 3707 aa8.64□□□□□ -1.03
SF3B3-208ENST00000567250 TRBV20OR9-2A0A075B6H5 130 aa8.63□□□□□ -1.03
SF3B3-208ENST00000567250 IGKV3D-20A0A0C4DH25 116 aa8.63□□□□□ -1.03
SF3B3-208ENST00000567250 CXCL1P09341 107 aa8.63□□□□□ -1.03
SF3B3-208ENST00000567250 C9orf85Q96MD7 179 aa8.63□□□□□ -1.03
SF3B3-208ENST00000567250 SMIM7Q9BQ49 75 aa8.63□□□□□ -1.03
SF3B3-208ENST00000567250 NDUFAF3Q9BU61 184 aa8.63□□□□□ -1.03
SF3B3-208ENST00000567250 MRPL16Q9NX20 251 aaKnown RBP8.63□□□□□ -1.03
SF3B3-208ENST00000567250 IGLL5B9A064 214 aa8.62□□□□□ -1.03
SF3B3-208ENST00000567250 KRBOX1C9JBD0 128 aa8.62□□□□□ -1.03
SF3B3-208ENST00000567250 SRP19P09132 144 aaKnown RBP8.62□□□□□ -1.03
SF3B3-208ENST00000567250 CLLU1Q5K131 121 aa8.62□□□□□ -1.03
SF3B3-208ENST00000567250 DNLZQ5SXM8 178 aa8.62□□□□□ -1.03
SF3B3-208ENST00000567250 RASL10AQ92737 203 aa8.62□□□□□ -1.03
SF3B3-208ENST00000567250 IL36BQ9NZH7 164 aa8.62□□□□□ -1.03
SF3B3-208ENST00000567250 IGHV4-4A0A075B6R2 117 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 XKRY2A2RUG3 117 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 F5H768 121 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 H3BVH4 76 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 IGLV2-8P01709 118 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 P01737 135 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 MED14OSP0DP75 135 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 RPS20P60866 119 aaKnown RBP8.61□□□□□ -1.03
SF3B3-208ENST00000567250 FAM74A3Q4VXF1 159 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 SYT8Q8NBV8 401 aa8.61□□□□□ -1.03
SF3B3-208ENST00000567250 LY96Q9Y6Y9 160 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms