RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 LINC00173Q6ZV60 143 aa17.81■□□□□ 0.44
LINC00543-201ENST00000567234 BOD1L2Q8IYS8 172 aa17.81■□□□□ 0.44
LINC00543-201ENST00000567234 TRBV12-3P01733 135 aa17.8■□□□□ 0.44
LINC00543-201ENST00000567234 FGF6P10767 208 aa17.8■□□□□ 0.44
LINC00543-201ENST00000567234 RIGQ13278 110 aa17.8■□□□□ 0.44
LINC00543-201ENST00000567234 OR2K2Q8NGT1 345 aa17.8■□□□□ 0.44
LINC00543-201ENST00000567234 IGKV2-40A0A087WW87 121 aaPredicted RBP17.79■□□□□ 0.44
LINC00543-201ENST00000567234 ZNF207O43670 478 aaKnown RBP17.79■□□□□ 0.44
LINC00543-201ENST00000567234 IGKV2D-40P01614 121 aaPredicted RBP17.79■□□□□ 0.44
LINC00543-201ENST00000567234 GLMPQ8WWB7 406 aa17.79■□□□□ 0.44
LINC00543-201ENST00000567234 IGHV3-66A0A0C4DH42 116 aa17.79■□□□□ 0.44
LINC00543-201ENST00000567234 PSMB8P28062 276 aa17.79■□□□□ 0.44
LINC00543-201ENST00000567234 CRIP1P50238 77 aa17.79■□□□□ 0.44
LINC00543-201ENST00000567234 PRR25Q96S07 402 aa17.79■□□□□ 0.44
LINC00543-201ENST00000567234 IGHV3-11P01762 117 aa17.78■□□□□ 0.44
LINC00543-201ENST00000567234 Q71RC1 249 aaPredicted RBP17.78■□□□□ 0.44
LINC00543-201ENST00000567234 HLA-DMBP28068 263 aa17.77■□□□□ 0.44
LINC00543-201ENST00000567234 SVIPQ8NHG7 77 aa17.77■□□□□ 0.44
LINC00543-201ENST00000567234 C8orf49Q96NF6 230 aa17.77■□□□□ 0.44
LINC00543-201ENST00000567234 IGHV3OR16-13A0A075B7E8 117 aa17.77■□□□□ 0.43
LINC00543-201ENST00000567234 IGHV3-74A0A0B4J1X5 117 aa17.77■□□□□ 0.43
LINC00543-201ENST00000567234 TMEM189A5PLL7 270 aa17.77■□□□□ 0.43
LINC00543-201ENST00000567234 IGFL4Q6B9Z1 124 aa17.77■□□□□ 0.43
LINC00543-201ENST00000567234 UNQ9165/PRO28630Q6UXU0 137 aa17.77■□□□□ 0.43
LINC00543-201ENST00000567234 TEX29Q8N6K0 151 aa17.77■□□□□ 0.43
LINC00543-201ENST00000567234 PGLYRP4Q96LB8 373 aa17.77■□□□□ 0.43
LINC00543-201ENST00000567234 TLN2Q9Y4G6 2542 aa17.77■□□□□ 0.43
LINC00543-201ENST00000567234 ACANP16112 2415 aa17.76■□□□□ 0.43
LINC00543-201ENST00000567234 C8orf86Q6ZUL3 223 aa17.76■□□□□ 0.43
LINC00543-201ENST00000567234 VGLL1Q99990 258 aa17.76■□□□□ 0.43
LINC00543-201ENST00000567234 IGHV3-49A0A0A0MS15 119 aa17.75■□□□□ 0.43
LINC00543-201ENST00000567234 A0A1B0GUT8 65 aa17.75■□□□□ 0.43
LINC00543-201ENST00000567234 FA2HQ7L5A8 372 aa17.75■□□□□ 0.43
LINC00543-201ENST00000567234 TRAV8-2A0A0B4J237 113 aa17.75■□□□□ 0.43
LINC00543-201ENST00000567234 TMEM95Q3KNT9 176 aa17.75■□□□□ 0.43
LINC00543-201ENST00000567234 ERASQ7Z444 233 aa17.75■□□□□ 0.43
LINC00543-201ENST00000567234 FLNBO75369 2602 aaKnown RBP17.74■□□□□ 0.43
LINC00543-201ENST00000567234 BMI1P35226 326 aa17.74■□□□□ 0.43
LINC00543-201ENST00000567234 SAP30O75446 220 aa17.73■□□□□ 0.43
LINC00543-201ENST00000567234 LINC01559Q495D7 138 aa17.73■□□□□ 0.43
LINC00543-201ENST00000567234 ASCL2Q99929 193 aa17.73■□□□□ 0.43
LINC00543-201ENST00000567234 A0A1W2PPM0 123 aa17.72■□□□□ 0.43
LINC00543-201ENST00000567234 K7EMT4 169 aa17.72■□□□□ 0.43
LINC00543-201ENST00000567234 ZNF493Q6ZR52 646 aa17.72■□□□□ 0.43
LINC00543-201ENST00000567234 LCNL1Q6ZST4 164 aa17.72■□□□□ 0.43
LINC00543-201ENST00000567234 HOXA3O43365 443 aaPredicted RBP17.72■□□□□ 0.43
LINC00543-201ENST00000567234 SH2D1AO60880 128 aa17.72■□□□□ 0.43
LINC00543-201ENST00000567234 PRB4P10163 310 aaPredicted RBP17.72■□□□□ 0.43
LINC00543-201ENST00000567234 SRSF2Q01130 221 aaKnown RBP17.72■□□□□ 0.43
LINC00543-201ENST00000567234 KIR3DS1Q14943 382 aa17.72■□□□□ 0.43
LINC00543-201ENST00000567234 RNF182Q8N6D2 247 aa17.72■□□□□ 0.43
LINC00543-201ENST00000567234 HIGD1BQ9P298 99 aa17.72■□□□□ 0.43
LINC00543-201ENST00000567234 BAHCC1Q9P281 2608 aa17.72■□□□□ 0.43
LINC00543-201ENST00000567234 FAM106AQ4KMX7 169 aa17.71■□□□□ 0.43
LINC00543-201ENST00000567234 GPHB5Q86YW7 130 aa17.71■□□□□ 0.43
LINC00543-201ENST00000567234 ZNF702PQ9H963 129 aa17.71■□□□□ 0.43
LINC00543-201ENST00000567234 TP73-AS1Q9UF72 201 aa17.71■□□□□ 0.43
LINC00543-201ENST00000567234 PRAC2D3DTV9 90 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 FABP2P12104 132 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 KRTAP1-1Q07627 177 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 FOXE3Q13461 319 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 ADAMTSL5Q6ZMM2 481 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 DAZ1Q9NQZ3 744 aaKnown RBP17.7■□□□□ 0.42
LINC00543-201ENST00000567234 U3KQK5 164 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 IGHV7-4-1A0A0J9YVY3 117 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 ELANEP08246 267 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 OTOGQ6ZRI0 2925 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 Q8TAT8 98 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 C16orf92Q96LL3 132 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 SIGLEC8Q9NYZ4 499 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 SMPXQ9UHP9 88 aa17.7■□□□□ 0.42
LINC00543-201ENST00000567234 RIPPLY3P57055 190 aa17.69■□□□□ 0.42
LINC00543-201ENST00000567234 SAMD13Q5VXD3 122 aa17.69■□□□□ 0.42
LINC00543-201ENST00000567234 C9orf47Q6ZRZ4 202 aa17.69■□□□□ 0.42
LINC00543-201ENST00000567234 PRSS3P2Q8NHM4 247 aa17.69■□□□□ 0.42
LINC00543-201ENST00000567234 JMJD8Q96S16 334 aa17.69■□□□□ 0.42
LINC00543-201ENST00000567234 H3BUT2 72 aa17.68■□□□□ 0.42
LINC00543-201ENST00000567234 J3QR89 54 aa17.68■□□□□ 0.42
LINC00543-201ENST00000567234 MYOZ3Q8TDC0 251 aa17.68■□□□□ 0.42
LINC00543-201ENST00000567234 SPCS1Q9Y6A9 102 aa17.68■□□□□ 0.42
LINC00543-201ENST00000567234 ERCC8Q13216 396 aa17.68■□□□□ 0.42
LINC00543-201ENST00000567234 Q8N2B8 174 aa17.68■□□□□ 0.42
LINC00543-201ENST00000567234 FABP5P3A8MUU1 101 aa17.67■□□□□ 0.42
LINC00543-201ENST00000567234 TMEM86BQ8N661 226 aa17.67■□□□□ 0.42
LINC00543-201ENST00000567234 RNF152Q8N8N0 203 aa17.67■□□□□ 0.42
LINC00543-201ENST00000567234 AGPAT4-IT1Q9H0P7 198 aa17.67■□□□□ 0.42
LINC00543-201ENST00000567234 SONP18583 2426 aaKnown RBP17.66■□□□□ 0.42
LINC00543-201ENST00000567234 SOCS3O14543 225 aa17.66■□□□□ 0.42
LINC00543-201ENST00000567234 HLA-DRB4P13762 266 aa17.66■□□□□ 0.42
LINC00543-201ENST00000567234 ZNF80P51504 273 aaPredicted RBP17.66■□□□□ 0.42
LINC00543-201ENST00000567234 ZNF138P52744 262 aa17.66■□□□□ 0.42
LINC00543-201ENST00000567234 TMEM78Q5T7P6 136 aa17.66■□□□□ 0.42
LINC00543-201ENST00000567234 IL17RELQ6ZVW7 336 aa17.66■□□□□ 0.42
LINC00543-201ENST00000567234 RHPN1-AS1Q9BWJ2 59 aa17.66■□□□□ 0.42
LINC00543-201ENST00000567234 HLA-DRB4X5D2U9 266 aa17.66■□□□□ 0.42
LINC00543-201ENST00000567234 UFC1Q9Y3C8 167 aa17.65■□□□□ 0.42
LINC00543-201ENST00000567234 LENEPQ9Y5L5 61 aa17.65■□□□□ 0.42
LINC00543-201ENST00000567234 C10orf99Q6UWK7 81 aa17.65■□□□□ 0.42
LINC00543-201ENST00000567234 ARMS2P0C7Q2 107 aa17.64■□□□□ 0.41
LINC00543-201ENST00000567234 SMIM13P0DJ93 91 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms