RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
HERC2-208ENST00000566635 NAT8BQ9UHF3 227 aa13.1□□□□□ -0.31
HERC2-208ENST00000566635 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
HERC2-208ENST00000566635 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
HERC2-208ENST00000566635 KLLNB2CW77 178 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 H3BMM0 161 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 RBMY1DP0C7P1 496 aaKnown RBP13.09□□□□□ -0.31
HERC2-208ENST00000566635 C12orf54Q6X4T0 127 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 BTF3L4Q96K17 158 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 ODF3Q96PU9 254 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 TRAV9-1A0A075B6T8 112 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 OR11H12B2RN74 326 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 CD7P09564 240 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 SPINK13Q1W4C9 94 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 MRPL54Q6P161 138 aaKnown RBP13.09□□□□□ -0.31
HERC2-208ENST00000566635 ZNF575Q86XF7 245 aa13.09□□□□□ -0.31
HERC2-208ENST00000566635 TRAV12-2A0A075B6T6 113 aa13.08□□□□□ -0.32
HERC2-208ENST00000566635 IGKV3D-20A0A0C4DH25 116 aa13.08□□□□□ -0.32
HERC2-208ENST00000566635 LEPP41159 167 aa13.08□□□□□ -0.32
HERC2-208ENST00000566635 FXYD7P58549 80 aa13.08□□□□□ -0.32
HERC2-208ENST00000566635 BEAN1Q3B7T3 259 aa13.08□□□□□ -0.32
HERC2-208ENST00000566635 LINC01559Q495D7 138 aa13.08□□□□□ -0.32
HERC2-208ENST00000566635 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
HERC2-208ENST00000566635 WFDC10AQ9H1F0 79 aa13.08□□□□□ -0.32
HERC2-208ENST00000566635 TYMSP04818 313 aa13.07□□□□□ -0.32
HERC2-208ENST00000566635 C9orf66Q5T8R8 295 aa13.07□□□□□ -0.32
HERC2-208ENST00000566635 TMEM158Q8WZ71 300 aa13.07□□□□□ -0.32
HERC2-208ENST00000566635 GFRA4Q9GZZ7 299 aa13.07□□□□□ -0.32
HERC2-208ENST00000566635 NAGKQ9UJ70 344 aa13.07□□□□□ -0.32
HERC2-208ENST00000566635 GRIFINA4D1Z8 144 aa13.07□□□□□ -0.32
HERC2-208ENST00000566635 GFI1BQ5VTD9 330 aa13.07□□□□□ -0.32
HERC2-208ENST00000566635 Q6AWC8 147 aa13.07□□□□□ -0.32
HERC2-208ENST00000566635 SRD5A3Q9H8P0 318 aa13.07□□□□□ -0.32
HERC2-208ENST00000566635 TRAV21A0A0B4J279 112 aa13.06□□□□□ -0.32
HERC2-208ENST00000566635 A8MTW9 85 aa13.06□□□□□ -0.32
HERC2-208ENST00000566635 TPPP3Q9BW30 176 aa13.06□□□□□ -0.32
HERC2-208ENST00000566635 COL6A5A8TX70 2615 aa13.06□□□□□ -0.32
HERC2-208ENST00000566635 PHOX2AO14813 284 aa13.06□□□□□ -0.32
HERC2-208ENST00000566635 CDKN1BP46527 198 aa13.06□□□□□ -0.32
HERC2-208ENST00000566635 TRAV12-3A0A0B4J271 114 aa13.05□□□□□ -0.32
HERC2-208ENST00000566635 C7orf71A4D174 169 aa13.05□□□□□ -0.32
HERC2-208ENST00000566635 FAM231BA6NCW3 169 aa13.05□□□□□ -0.32
HERC2-208ENST00000566635 TRGC2P03986 189 aa13.05□□□□□ -0.32
HERC2-208ENST00000566635 MUC21Q5SSG8 566 aa13.05□□□□□ -0.32
HERC2-208ENST00000566635 SHISA2Q6UWI4 295 aa13.05□□□□□ -0.32
HERC2-208ENST00000566635 C19orf73Q9NVV2 129 aa13.05□□□□□ -0.32
HERC2-208ENST00000566635 IGLL1P15814 213 aa13.04□□□□□ -0.32
HERC2-208ENST00000566635 INSL3P51460 131 aa13.04□□□□□ -0.32
HERC2-208ENST00000566635 CMYA5Q8N3K9 4069 aa13.04□□□□□ -0.32
HERC2-208ENST00000566635 NOTCH3Q9UM47 2321 aa13.04□□□□□ -0.32
HERC2-208ENST00000566635 XKRY2A2RUG3 117 aa13.04□□□□□ -0.32
HERC2-208ENST00000566635 TRGC1P0CF51 173 aa13.04□□□□□ -0.32
HERC2-208ENST00000566635 RPS20P60866 119 aaKnown RBP13.04□□□□□ -0.32
HERC2-208ENST00000566635 JOSD1Q15040 202 aaPredicted RBP13.04□□□□□ -0.32
HERC2-208ENST00000566635 WFDC9Q8NEX5 89 aa13.04□□□□□ -0.32
HERC2-208ENST00000566635 PACRGQ96M98 296 aaPredicted RBP13.04□□□□□ -0.32
HERC2-208ENST00000566635 TSPOP30536 169 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 FOXA3P55318 350 aaPredicted RBP13.03□□□□□ -0.32
HERC2-208ENST00000566635 ANXA2RQ3ZCQ2 193 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 FRZBQ92765 325 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 HIST1H2BLQ99880 126 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 ANK2Q01484 3957 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 MUC21A0A0G2JKD1 596 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 MUC21A0A140T8X8 626 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 ARMS2P0C7Q2 107 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 IGLC6P0CF74 106 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 FABP4P15090 132 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 PRR31Q5SQ13 230 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 LYZL1Q6UWQ5 148 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 STHQ8IWL8 128 aa13.03□□□□□ -0.32
HERC2-208ENST00000566635 CRXO43186 299 aaPredicted RBP13.02□□□□□ -0.33
HERC2-208ENST00000566635 ZNF324O75467 553 aaPredicted RBP13.02□□□□□ -0.33
HERC2-208ENST00000566635 NDUFAF3Q9BU61 184 aa13.02□□□□□ -0.33
HERC2-208ENST00000566635 A0A1B0GXF2 115 aa13.01□□□□□ -0.33
HERC2-208ENST00000566635 RBMY1A1P0DJD3 496 aaKnown RBP13.01□□□□□ -0.33
HERC2-208ENST00000566635 RBMY1CP0DJD4 496 aa13.01□□□□□ -0.33
HERC2-208ENST00000566635 RBMY1FQ15415 496 aaKnown RBP13.01□□□□□ -0.33
HERC2-208ENST00000566635 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
HERC2-208ENST00000566635 FER1L6-AS1Q8NA97 138 aa13.01□□□□□ -0.33
HERC2-208ENST00000566635 SNURFLB1AK76 121 aa13.01□□□□□ -0.33
HERC2-208ENST00000566635 CAMPP49913 170 aa13.01□□□□□ -0.33
HERC2-208ENST00000566635 CMC4P56277 68 aaPredicted RBP13.01□□□□□ -0.33
HERC2-208ENST00000566635 FAM110AQ9BQ89 295 aa13.01□□□□□ -0.33
HERC2-208ENST00000566635 MCRIP2Q9BUT9 160 aaKnown RBP13.01□□□□□ -0.33
HERC2-208ENST00000566635 PRO1933Q9H354 126 aa13.01□□□□□ -0.33
HERC2-208ENST00000566635 TCAPO15273 167 aa13□□□□□ -0.33
HERC2-208ENST00000566635 CTRLP40313 264 aa13□□□□□ -0.33
HERC2-208ENST00000566635 NUTF2P61970 127 aaKnown RBP13□□□□□ -0.33
HERC2-208ENST00000566635 COA6Q5JTJ3 125 aaKnown RBP13□□□□□ -0.33
HERC2-208ENST00000566635 TMEM136Q6ZRR5 245 aa13□□□□□ -0.33
HERC2-208ENST00000566635 ATP5L2Q7Z4Y8 100 aa13□□□□□ -0.33
HERC2-208ENST00000566635 TRAPPC1Q9Y5R8 145 aa13□□□□□ -0.33
HERC2-208ENST00000566635 A0A1B0GUT8 65 aa12.99□□□□□ -0.33
HERC2-208ENST00000566635 H3BVH4 76 aa12.99□□□□□ -0.33
HERC2-208ENST00000566635 PDZD11Q5EBL8 140 aa12.99□□□□□ -0.33
HERC2-208ENST00000566635 GNRH2O43555 120 aa12.98□□□□□ -0.33
HERC2-208ENST00000566635 HBBP68871 147 aa12.98□□□□□ -0.33
HERC2-208ENST00000566635 DEFB125Q8N687 156 aa12.98□□□□□ -0.33
HERC2-208ENST00000566635 CLUHP3Q96NS8 147 aa12.98□□□□□ -0.33
HERC2-208ENST00000566635 PKD1L1Q8TDX9 2849 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms