RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ODF3BA8MYP8 253 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 LINC01587Q99440 93 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 RNF114Q9Y508 228 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 TRAV12-2A0A075B6T6 113 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 IGHV4-59P01825 116 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 NEGR1Q7Z3B1 354 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 CSTL1Q9H114 145 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 SPCS1Q9Y6A9 102 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 C5orf56Q8N8D9 126 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 LINC01356Q8N9X3 169 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 CYSLTR1Q9Y271 337 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 CHTOPQ9Y3Y2 248 aaKnown RBP8.98□□□□□ -0.97
CDH1-210ENST00000566612 ASPMQ8IZT6 3477 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 A0A1B0GXF2 115 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 APOMO95445 188 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 DKK2Q9UBU2 259 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 MTORP42345 2549 aa8.98□□□□□ -0.97
CDH1-210ENST00000566612 NDUFA4O00483 81 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 LGALS3P17931 250 aaKnown RBP8.97□□□□□ -0.97
CDH1-210ENST00000566612 MYCNOSP40205 109 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 ZNF80P51504 273 aaPredicted RBP8.97□□□□□ -0.97
CDH1-210ENST00000566612 DSCR9P59020 149 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 SPINK13Q1W4C9 94 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 TNFRSF18Q9Y5U5 241 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 TRBV12-3P01733 135 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 COX11Q9Y6N1 276 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 TMEM8BA6NDV4 472 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 NPIPB6E9PJ23 425 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 GNRH2O43555 120 aa8.97□□□□□ -0.97
CDH1-210ENST00000566612 DSCAML1Q8TD84 2053 aa8.96□□□□□ -0.97
CDH1-210ENST00000566612 HIVEP2P31629 2446 aa8.96□□□□□ -0.97
CDH1-210ENST00000566612 VWC2LB2RUY7 222 aa8.96□□□□□ -0.97
CDH1-210ENST00000566612 TP73-AS1Q9UF72 201 aa8.96□□□□□ -0.97
CDH1-210ENST00000566612 AKAP13Q12802 2813 aa8.96□□□□□ -0.97
CDH1-210ENST00000566612 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.98
CDH1-210ENST00000566612 HSD52Q0P140 79 aa8.96□□□□□ -0.98
CDH1-210ENST00000566612 DEFB112Q30KQ8 113 aa8.96□□□□□ -0.98
CDH1-210ENST00000566612 KLK9Q9UKQ9 250 aa8.96□□□□□ -0.98
CDH1-210ENST00000566612 PCP4P48539 62 aa8.96□□□□□ -0.98
CDH1-210ENST00000566612 LINC00310P59036 64 aa8.96□□□□□ -0.98
CDH1-210ENST00000566612 UNQ9165/PRO28630Q6UXU0 137 aa8.96□□□□□ -0.98
CDH1-210ENST00000566612 TMEM238LA0A1B0GVL6 79 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 A6NJY4 79 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 CRIP1P50238 77 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 LOXL1Q08397 574 aaPredicted RBP8.95□□□□□ -0.98
CDH1-210ENST00000566612 UBE2V1Q13404 147 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 Q71RC1 249 aaPredicted RBP8.95□□□□□ -0.98
CDH1-210ENST00000566612 SEC11AP67812 179 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 C11orf71Q6IPW1 123 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 OR9G4Q8NGQ1 327 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 C2orf70A6NJV1 201 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 SLC25A16P16260 332 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 MRPL52Q86TS9 123 aaKnown RBP8.95□□□□□ -0.98
CDH1-210ENST00000566612 IGKV3OR2-268A0A0C4DH90 116 aa8.95□□□□□ -0.98
CDH1-210ENST00000566612 DUSP14O95147 198 aaKnown RBP8.95□□□□□ -0.98
CDH1-210ENST00000566612 SUMO2P61956 95 aaKnown RBP8.95□□□□□ -0.98
CDH1-210ENST00000566612 ZNF815PA8K554 130 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 SAMD13Q5VXD3 122 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 C10orf105Q8TEF2 133 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 AJUBAQ96IF1 538 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 CCDC140Q96MF4 163 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 SPOCK3Q9BQ16 436 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 MRPL16Q9NX20 251 aaKnown RBP8.94□□□□□ -0.98
CDH1-210ENST00000566612 DEFB131AP59861 70 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 KIR3DS1Q14943 382 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 Q8N8P6 123 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 MRPL35Q9NZE8 188 aaKnown RBP8.94□□□□□ -0.98
CDH1-210ENST00000566612 RAI1Q7Z5J4 1906 aaPredicted RBP8.94□□□□□ -0.98
CDH1-210ENST00000566612 IGHV7-4-1A0A0J9YVY3 117 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 A0A1W2PPR1 153 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 KNCNA6PVL3 124 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 COX8AP10176 69 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 ZNF876PQ49A33 203 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 YAE1D1Q9NRH1 226 aa8.94□□□□□ -0.98
CDH1-210ENST00000566612 SMPXQ9UHP9 88 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 IGKV3D-20A0A0C4DH25 116 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 H7C1H1 209 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 IGLV2-11P01706 119 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 ANKRD39Q53RE8 183 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 VCX2Q9H322 139 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 JMJD1CQ15652 2540 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 LGALS9BQ3B8N2 356 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 LGALS9CQ6DKI2 356 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 C2orf66Q6UXQ4 117 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 PCP2Q8IVA1 136 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 PEMTQ9UBM1 199 aa8.93□□□□□ -0.98
CDH1-210ENST00000566612 GEMIN7Q9H840 131 aaKnown RBP8.92□□□□□ -0.98
CDH1-210ENST00000566612 RRN3P1Q2M238 152 aa8.92□□□□□ -0.98
CDH1-210ENST00000566612 KLHL30-AS1Q8NEE0 82 aa8.92□□□□□ -0.98
CDH1-210ENST00000566612 CD5LO43866 347 aa8.92□□□□□ -0.98
CDH1-210ENST00000566612 TTTY13Q9BZ97 58 aa8.92□□□□□ -0.98
CDH1-210ENST00000566612 DEFB136Q30KP8 78 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 Q5PR19 223 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 BVES-AS1Q5T3Y7 98 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 LYRM7Q5U5X0 104 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 TCTEX1D4Q5JR98 221 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 SAMD5Q5TGI4 173 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 UBE2E2Q96LR5 201 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 SMAD5-AS1Q9Y6J3 95 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 PRRC2AP48634 2157 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms