RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ITPR1Q14643 2758 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 PTPRSQ13332 1948 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 DENND4CQ5VZ89 1909 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 NYNRINQ9P2P1 1898 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 LRRK2Q5S007 2527 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 DSPPQ9NZW4 1301 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 FN1P02751 2386 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 SCN9AQ15858 1988 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 CEP295Q9C0D2 2601 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 IGLV2-18A0A075B6J9 118 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 FAM92AA1XBS5 289 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 A8MWV9 139 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 M0R129 80 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 IFNGP01579 166 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 PMP2P02689 132 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 SLC25A5P05141 298 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 GPX1P07203 203 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 KRTAP1-4P0C5Y4 121 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 METTL15P1P0C7V9 234 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 CSRP1P21291 193 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 AQP4P55087 323 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 ERHP84090 104 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 RNASE10Q5GAN6 216 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 PABPC1L2AQ5JQF8 200 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 LCE3AQ5TA76 89 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 C7orf65Q6ZTY9 151 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 LINC00471Q8N535 108 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 FAM216BQ8N7L0 139 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 OR5A2Q8NGI9 324 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 DEDD2Q8WXF8 326 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 TMEM203Q969S6 136 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 ZNF471Q9BX82 626 aaPredicted RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 FKBP11Q9NYL4 201 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 FREM2Q5SZK8 3169 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 MTORP42345 2549 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 DSPP15924 2871 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 ANKRD31Q8N7Z5 1873 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 KIF26AQ9ULI4 1882 aaPredicted RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 MYO5AQ9Y4I1 1855 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 DDX60Q8IY21 1712 aaKnown RBP1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 ZSWIM8A7E2V4 1837 aa1.94□□□□□ -2.1
HERPUD1-211ENST00000566550 IGF2RP11717 2491 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 COL27A1Q8IZC6 1860 aaPredicted RBP1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 IGKV1D-42A0A075B6H8 117 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 IGHV3-64A0A075B6Q5 118 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 FAM236AA0A1B0GUQ0 79 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 FAM236BA0A1B0GV22 79 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 OR2T8A6NH00 312 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 HMSDA8MTL9 139 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 FNDC10F2Z333 226 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 LY6LH3BQJ8 138 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 NPFFO15130 113 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 PRB1P04280 392 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 CTSGP08311 255 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 TPT1P13693 172 aaKnown RBP1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 EMX2Q04743 252 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 NNATQ16517 81 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 ESRGQ1W209 222 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 ZNF181Q2M3W8 571 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 PATE2Q6UY27 113 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 OR2T35Q8NGX2 323 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 OR4C6Q8NH72 309 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 MAGOHBQ96A72 148 aaKnown RBP1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 RETNLBQ9BQ08 111 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 NHP2Q9NX24 153 aaKnown RBP1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 TSC2P49815 1807 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 ADAMTS9Q9P2N4 1935 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 DUOX1Q9NRD9 1551 aa1.93□□□□□ -2.1
HERPUD1-211ENST00000566550 OTOGLQ3ZCN5 2332 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 GBF1Q92538 1859 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 ATRQ13535 2644 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 FRYLO94915 3013 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 CCDC168Q8NDH2 2452 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 IGLV3-9A0A075B6K5 115 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 TMSB15BA0A087X1C1 80 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 TRAV1-1A0A0B4J248 108 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 G3V3Q6 166 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 RTL8CO15255 209 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 HBDP02042 147 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 COX6A1P12074 109 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 GUCA1AP43080 201 aaPredicted RBP1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 AKR1D1P51857 326 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 MAXP61244 160 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 ZNF90Q03938 601 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 DIAPH2-AS1Q14236 149 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 TAF9Q16594 264 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 ZNF791Q3KP31 576 aaPredicted RBP1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 KRTAP13-3Q3SY46 172 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 Q8IYB0 196 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 MORN4Q8NDC4 146 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 OR8B3Q8NGG8 313 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 NAT14Q8WUY8 206 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 NDUFB11Q9NX14 153 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 TAS2R4Q9NYW5 299 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 COMMD3Q9UBI1 195 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 LY96Q9Y6Y9 160 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 MGAMO43451 1857 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 CDK5RAP2Q96SN8 1893 aa1.92□□□□□ -2.1
HERPUD1-211ENST00000566550 TP53BP1Q12888 1972 aaPredicted RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms