RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SMIM3Q9BZL3 60 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 ARL6Q9H0F7 186 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 TMEM222Q9H0R3 208 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 VCX3BQ9H321 246 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 Q9H521 79 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 VSIRQ9H7M9 311 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 NAA60Q9H7X0 242 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 ENY2Q9NPA8 101 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 DAZ1Q9NQZ3 744 aaKnown RBP0.7□□□□□ -2.3
SMG1-212ENST00000566328 FKBP11Q9NYL4 201 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 NDUFA13Q9P0J0 144 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 KLK9Q9UKQ9 250 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 PRNDQ9UKY0 176 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 ANAPC10Q9UM13 185 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 UFC1Q9Y3C8 167 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 TMEM56-RWDD3S4R434 201 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 V9GYH0 126 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 LRP2P98164 4655 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 FLG2Q5D862 2391 aaPredicted RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 TRAV26-1A0A087WT03 109 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 A0A0A6YYH2 397 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 IGHV3-73A0A0B4J1V6 119 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 TRAV12-3A0A0B4J271 114 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 TRAV25A0A0B4J276 109 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 A0A0B4J2A0 478 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 MUC21A0A0G2JKD1 596 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 A0A0J9YX75 114 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 MUC21A0A140T8X8 626 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 ANKRD20A5PA0PJZ0 165 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 IGSF23A1L1A6 192 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 PLAC8L1A1L4L8 177 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 C9orf170A2RU37 121 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 OR4C46A6NHA9 309 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 A6NJ64 397 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 ZNF98A6NK75 572 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 A8MWP6 167 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 DISC1C4P0D8 188 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 F5H768 121 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 F8WDY8 70 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SMLR1H3BR10 107 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 M0R3E3 92 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SLC17A3O00476 420 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 AGPAT2O15120 278 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 CRXO43186 299 aaPredicted RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 RBFOX2O43251 390 aaKnown RBP eCLIP0.69□□□□□ -2.3
SMG1-212ENST00000566328 SYNGR2O43760 224 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 MRPS14O60783 128 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 HYPMO75409 117 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SLC22A5O76082 557 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SFT2D2O95562 160 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 DHFRP00374 187 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 IL5P05113 134 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 OR10J4P0C629 311 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 OR4E1P0C645 316 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SFTA3P0C7M3 94 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 AKAIN1P0CW23 69 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SULT1A3P0DMM9 295 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SULT1A4P0DMN0 295 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 PYYP10082 97 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 LGALS3P17931 250 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 GPX4P36969 197 aaPredicted RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 HTR2BP41595 481 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 CXCL5P42830 114 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 UBE2AP49459 152 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 BCAP31P51572 246 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SUB1P53999 127 aaKnown RBP eCLIP0.69□□□□□ -2.3
SMG1-212ENST00000566328 TMBIM6P55061 237 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 YPEL3P61236 119 aaPredicted RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 RHOBP62745 196 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 RANP62826 216 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 PAFAH1B2P68402 229 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 PSG9Q00887 426 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 HIST1H1AQ02539 215 aaPredicted RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 CATR1Q13166 79 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 LAGE3Q14657 143 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 SMCO1Q147U7 214 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 TMEM183BQ1AE95 376 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 ESRGQ1W209 222 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 BSXQ3C1V8 233 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 LGALS9CQ6DKI2 356 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 AMTNQ6UX39 209 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 ZNF705AQ6ZN79 300 aaPredicted RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 Q6ZTI0 123 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 MIR17HGQ75NE6 70 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 LINC00305Q7Z4B0 112 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 TMEM183AQ8IXX5 376 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 LGI3Q8N145 548 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 TOMM5Q8N4H5 51 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 OR11H7Q8NGC8 314 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 VSTM2AQ8TAG5 236 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 DTD1Q8TEA8 209 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 ZNF431Q8TF32 576 aaPredicted RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 SMIM4Q8WVI0 70 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 RBPMSQ93062 196 aaKnown RBP0.69□□□□□ -2.3
SMG1-212ENST00000566328 GALNT14Q96FL9 552 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 HYLS1Q96M11 299 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 METTL26Q96S19 204 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 MGST2Q99735 147 aa0.69□□□□□ -2.3
SMG1-212ENST00000566328 PRRT1Q99946 306 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms