RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SRIP30626 198 aa12.46□□□□□ -0.41
USB1-213ENST00000566292 CDC34P49427 236 aaPredicted RBP12.46□□□□□ -0.41
USB1-213ENST00000566292 OR2G3Q8NGZ4 309 aa12.46□□□□□ -0.41
USB1-213ENST00000566292 SGK494Q96LW2 274 aa12.46□□□□□ -0.41
USB1-213ENST00000566292 ORM1P02763 201 aa12.45□□□□□ -0.42
USB1-213ENST00000566292 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
USB1-213ENST00000566292 SUN5Q8TC36 379 aa12.45□□□□□ -0.42
USB1-213ENST00000566292 PCNPQ8WW12 178 aaKnown RBP12.45□□□□□ -0.42
USB1-213ENST00000566292 AQP10Q96PS8 301 aa12.45□□□□□ -0.42
USB1-213ENST00000566292 LOC100131303A0A0U1RQF7 123 aa12.44□□□□□ -0.42
USB1-213ENST00000566292 ATP6V0CP27449 155 aa12.44□□□□□ -0.42
USB1-213ENST00000566292 OR4C5Q8NGB2 326 aa12.44□□□□□ -0.42
USB1-213ENST00000566292 RAB24Q969Q5 203 aa12.44□□□□□ -0.42
USB1-213ENST00000566292 PSMG3Q9BT73 122 aaPredicted RBP12.44□□□□□ -0.42
USB1-213ENST00000566292 SDF2L1Q9HCN8 221 aa12.44□□□□□ -0.42
USB1-213ENST00000566292 LY96Q9Y6Y9 160 aa12.44□□□□□ -0.42
USB1-213ENST00000566292 GCHFRP30047 84 aa12.43□□□□□ -0.42
USB1-213ENST00000566292 FUSP35637 526 aaKnown RBP eCLIP12.43□□□□□ -0.42
USB1-213ENST00000566292 ZNF80P51504 273 aaPredicted RBP12.43□□□□□ -0.42
USB1-213ENST00000566292 Q5BKY6 102 aa12.43□□□□□ -0.42
USB1-213ENST00000566292 Q8N1X5 172 aa12.43□□□□□ -0.42
USB1-213ENST00000566292 C5orf17Q8NAS9 161 aa12.43□□□□□ -0.42
USB1-213ENST00000566292 C11orf21Q9P2W6 132 aa12.43□□□□□ -0.42
USB1-213ENST00000566292 C9JCJ5 164 aa12.42□□□□□ -0.42
USB1-213ENST00000566292 TCRAP04437 139 aa12.42□□□□□ -0.42
USB1-213ENST00000566292 ASB13Q8WXK3 278 aa12.42□□□□□ -0.42
USB1-213ENST00000566292 KCNS1Q96KK3 526 aa12.42□□□□□ -0.42
USB1-213ENST00000566292 TXNDC17Q9BRA2 123 aa12.42□□□□□ -0.42
USB1-213ENST00000566292 MED28Q9H204 178 aa12.42□□□□□ -0.42
USB1-213ENST00000566292 SH3BGRL3Q9H299 93 aa12.42□□□□□ -0.42
USB1-213ENST00000566292 BATF3Q9NR55 127 aa12.42□□□□□ -0.42
USB1-213ENST00000566292 SERTM2A0A1B0GWG4 89 aa12.41□□□□□ -0.42
USB1-213ENST00000566292 PTTG1O95997 202 aa12.41□□□□□ -0.42
USB1-213ENST00000566292 IGLV2-11P01706 119 aa12.41□□□□□ -0.42
USB1-213ENST00000566292 GATA1P15976 413 aaPredicted RBP12.41□□□□□ -0.42
USB1-213ENST00000566292 NFE4Q86UQ8 179 aa12.41□□□□□ -0.42
USB1-213ENST00000566292 NDFIP1Q9BT67 221 aa12.41□□□□□ -0.42
USB1-213ENST00000566292 TRAV9-2A0A087WT02 112 aa12.4□□□□□ -0.42
USB1-213ENST00000566292 GGTLC3B5MD39 225 aa12.4□□□□□ -0.42
USB1-213ENST00000566292 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
USB1-213ENST00000566292 ERVFC1-1P60608 527 aa12.4□□□□□ -0.42
USB1-213ENST00000566292 SERF2P84101 59 aa12.4□□□□□ -0.42
USB1-213ENST00000566292 PSG8Q9UQ74 426 aa12.4□□□□□ -0.42
USB1-213ENST00000566292 MBP02144 154 aa12.39□□□□□ -0.43
USB1-213ENST00000566292 EVI2AP22794 236 aa12.39□□□□□ -0.43
USB1-213ENST00000566292 SUMO1P63165 101 aaKnown RBP12.39□□□□□ -0.43
USB1-213ENST00000566292 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
USB1-213ENST00000566292 TMEM75Q8N9X5 138 aa12.39□□□□□ -0.43
USB1-213ENST00000566292 SCRT2Q9NQ03 307 aa12.39□□□□□ -0.43
USB1-213ENST00000566292 MSRB1Q9NZV6 116 aa12.39□□□□□ -0.43
USB1-213ENST00000566292 A0A087WTM6 91 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 K7EP13 123 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 EREGO14944 169 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 CXorf1O96002 111 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 GCGP01275 180 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 C9orf85Q96MD7 179 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 TMEM167BQ9NRX6 74 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 PGPEP1Q9NXJ5 209 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 EPDR1Q9UM22 224 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 TNFSF18Q9UNG2 199 aa12.38□□□□□ -0.43
USB1-213ENST00000566292 RNF222A6NCQ9 220 aa12.37□□□□□ -0.43
USB1-213ENST00000566292 FBLL1A6NHQ2 334 aaKnown RBP12.37□□□□□ -0.43
USB1-213ENST00000566292 K7EQM0 130 aa12.37□□□□□ -0.43
USB1-213ENST00000566292 TAAR5O14804 337 aa12.37□□□□□ -0.43
USB1-213ENST00000566292 RS1O15537 224 aa12.37□□□□□ -0.43
USB1-213ENST00000566292 PFN1P07737 140 aaKnown RBP12.37□□□□□ -0.43
USB1-213ENST00000566292 GIPP09681 153 aaPredicted RBP12.37□□□□□ -0.43
USB1-213ENST00000566292 FLI1Q01543 452 aaPredicted RBP12.37□□□□□ -0.43
USB1-213ENST00000566292 CFAP126Q5VTH2 177 aa12.37□□□□□ -0.43
USB1-213ENST00000566292 RPL7L1Q6DKI1 246 aaKnown RBP12.37□□□□□ -0.43
USB1-213ENST00000566292 PRNTQ86SH4 94 aa12.37□□□□□ -0.43
USB1-213ENST00000566292 NHLRC2Q8NBF2 726 aa12.37□□□□□ -0.43
USB1-213ENST00000566292 ACTR3CQ9C0K3 210 aaPredicted RBP12.37□□□□□ -0.43
USB1-213ENST00000566292 CRYGDP07320 174 aa12.36□□□□□ -0.43
USB1-213ENST00000566292 TIRAPP58753 221 aa12.36□□□□□ -0.43
USB1-213ENST00000566292 SMUG1Q53HV7 270 aa12.36□□□□□ -0.43
USB1-213ENST00000566292 SH2D6Q7Z4S9 175 aa12.36□□□□□ -0.43
USB1-213ENST00000566292 CYB561D1Q8N8Q1 229 aa12.36□□□□□ -0.43
USB1-213ENST00000566292 SLC25A29Q8N8R3 303 aa12.36□□□□□ -0.43
USB1-213ENST00000566292 IGHV3-73A0A0B4J1V6 119 aa12.35□□□□□ -0.43
USB1-213ENST00000566292 PGPEP1LA6NFU8 196 aa12.35□□□□□ -0.43
USB1-213ENST00000566292 RNASE3P12724 160 aaKnown RBP12.35□□□□□ -0.43
USB1-213ENST00000566292 ZNF726P1Q15940 193 aa12.35□□□□□ -0.43
USB1-213ENST00000566292 CDPF1Q6NVV7 123 aa12.35□□□□□ -0.43
USB1-213ENST00000566292 PPT1P50897 306 aa12.34□□□□□ -0.43
USB1-213ENST00000566292 ZFP69Q49AA0 526 aa12.34□□□□□ -0.43
USB1-213ENST00000566292 ZNF506Q5JVG8 444 aa12.34□□□□□ -0.43
USB1-213ENST00000566292 INO80EQ8NBZ0 244 aaPredicted RBP12.34□□□□□ -0.43
USB1-213ENST00000566292 LINC00479Q96M42 142 aa12.34□□□□□ -0.43
USB1-213ENST00000566292 FXYD6-FXYD2A0A087WZ82 144 aa12.33□□□□□ -0.44
USB1-213ENST00000566292 TRAV34A0A0B4J273 112 aa12.33□□□□□ -0.44
USB1-213ENST00000566292 IGHV3-38A0A0C4DH36 116 aa12.33□□□□□ -0.44
USB1-213ENST00000566292 TRBV6-4A0A1B0GX49 114 aa12.33□□□□□ -0.44
USB1-213ENST00000566292 A0A1W2PRE2 83 aa12.33□□□□□ -0.44
USB1-213ENST00000566292 CIDEAO60543 219 aa12.33□□□□□ -0.44
USB1-213ENST00000566292 RHOHQ15669 191 aa12.33□□□□□ -0.44
USB1-213ENST00000566292 C10orf126Q8N4M7 172 aa12.33□□□□□ -0.44
USB1-213ENST00000566292 PTH2Q96A98 100 aa12.33□□□□□ -0.44
USB1-213ENST00000566292 LINC01556Q5JQF7 62 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms