RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 GATD1Q8NB37 220 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 NUP35Q8NFH5 326 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 C18orf32Q8TCD1 76 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 CHCHD1Q96BP2 118 aaKnown RBP9.36□□□□□ -0.91
SF3B3-206ENST00000565990 CLEC5AQ9NY25 188 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 MEGF8Q7Z7M0 2845 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 A0A1B0GV90 55 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 OR11H12B2RN74 326 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 K7EIL1 84 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 K7EQM0 130 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 TCRAP04437 139 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 ID1P41134 155 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 SNRPD3P62318 126 aaKnown RBP9.35□□□□□ -0.91
SF3B3-206ENST00000565990 HBBP68871 147 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 TMEM75Q8N9X5 138 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 BORCS7Q96B45 105 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 C16orf92Q96LL3 132 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 SLC50A1Q9BRV3 221 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 MAP6D1Q9H9H5 199 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 ZFP30Q9Y2G7 519 aa9.35□□□□□ -0.91
SF3B3-206ENST00000565990 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
SF3B3-206ENST00000565990 P01737 135 aa9.34□□□□□ -0.91
SF3B3-206ENST00000565990 PRB2P02812 416 aaPredicted RBP9.34□□□□□ -0.91
SF3B3-206ENST00000565990 SNRPCP09234 159 aaKnown RBP9.34□□□□□ -0.91
SF3B3-206ENST00000565990 CTRLP40313 264 aa9.34□□□□□ -0.91
SF3B3-206ENST00000565990 PSG9Q00887 426 aa9.34□□□□□ -0.91
SF3B3-206ENST00000565990 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
SF3B3-206ENST00000565990 LINC00322Q6ZN03 302 aaPredicted RBP9.34□□□□□ -0.91
SF3B3-206ENST00000565990 DAZAP1Q96EP5 407 aaKnown RBP9.34□□□□□ -0.91
SF3B3-206ENST00000565990 C20orf173Q96LM9 149 aa9.34□□□□□ -0.91
SF3B3-206ENST00000565990 NEU1Q99519 415 aa9.34□□□□□ -0.91
SF3B3-206ENST00000565990 ALKBH7Q9BT30 221 aaPredicted RBP9.34□□□□□ -0.91
SF3B3-206ENST00000565990 Q9H3A6 140 aa9.34□□□□□ -0.91
SF3B3-206ENST00000565990 AGRNO00468 2067 aa9.34□□□□□ -0.91
SF3B3-206ENST00000565990 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 OR5AL1P0C617 328 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 ZNF688P0C7X2 276 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 DEFB131AP59861 70 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 PSG3Q16557 428 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 IGFL4Q6B9Z1 124 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 APRG1Q8IVJ8 170 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 DEFB125Q8N687 156 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 Q8N976 141 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 NDFIP1Q9BT67 221 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 SNHG12Q9BXW3 62 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 UQCR10Q9UDW1 63 aa9.33□□□□□ -0.92
SF3B3-206ENST00000565990 H3BTX0 84 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 HSBP1O75506 76 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 IGHV4-30-4P0DP06 118 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 TCL1AP56279 114 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 GAGE1Q13065 139 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 SLAQ13239 276 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 PSMG4Q5JS54 123 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 Q86TA4 180 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 NIT1Q86X76 327 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 MRPL53Q96EL3 112 aaKnown RBP9.32□□□□□ -0.92
SF3B3-206ENST00000565990 CLUHP3Q96NS8 147 aa9.32□□□□□ -0.92
SF3B3-206ENST00000565990 EREGO14944 169 aa9.31□□□□□ -0.92
SF3B3-206ENST00000565990 TCAPO15273 167 aa9.31□□□□□ -0.92
SF3B3-206ENST00000565990 HLA-DMBP28068 263 aa9.31□□□□□ -0.92
SF3B3-206ENST00000565990 ZNF124Q15973 351 aa9.31□□□□□ -0.92
SF3B3-206ENST00000565990 COX8CQ7Z4L0 72 aa9.31□□□□□ -0.92
SF3B3-206ENST00000565990 RNF182Q8N6D2 247 aa9.31□□□□□ -0.92
SF3B3-206ENST00000565990 WFDC10AQ9H1F0 79 aa9.31□□□□□ -0.92
SF3B3-206ENST00000565990 FBN3Q75N90 2809 aa9.3□□□□□ -0.92
SF3B3-206ENST00000565990 TRAV34A0A0B4J273 112 aa9.3□□□□□ -0.92
SF3B3-206ENST00000565990 RBMY1BA6NDE4 496 aaKnown RBP9.3□□□□□ -0.92
SF3B3-206ENST00000565990 RBMY1EA6NEQ0 496 aaKnown RBP9.3□□□□□ -0.92
SF3B3-206ENST00000565990 H3BMM0 161 aa9.3□□□□□ -0.92
SF3B3-206ENST00000565990 CRXO43186 299 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-206ENST00000565990 RBMY1DP0C7P1 496 aaKnown RBP9.3□□□□□ -0.92
SF3B3-206ENST00000565990 C3orf79P0CE67 100 aa9.3□□□□□ -0.92
SF3B3-206ENST00000565990 BTF3P20290 206 aaKnown RBP9.3□□□□□ -0.92
SF3B3-206ENST00000565990 KRTDAPP60985 99 aa9.3□□□□□ -0.92
SF3B3-206ENST00000565990 RIGQ13278 110 aa9.3□□□□□ -0.92
SF3B3-206ENST00000565990 ZNF705AQ6ZN79 300 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-206ENST00000565990 FOXI2Q6ZQN5 318 aa9.3□□□□□ -0.92
SF3B3-206ENST00000565990 EXOC3-AS1Q8N2X6 119 aa9.3□□□□□ -0.92
SF3B3-206ENST00000565990 LINC00479Q96M42 142 aa9.3□□□□□ -0.92
SF3B3-206ENST00000565990 A0A0J9YX75 114 aa9.29□□□□□ -0.92
SF3B3-206ENST00000565990 A8MTW9 85 aa9.29□□□□□ -0.92
SF3B3-206ENST00000565990 F2Z2F3 143 aa9.29□□□□□ -0.92
SF3B3-206ENST00000565990 FRMD6-AS1P0C7T7 363 aa9.29□□□□□ -0.92
SF3B3-206ENST00000565990 GNG5P63218 68 aa9.29□□□□□ -0.92
SF3B3-206ENST00000565990 KIAA1644Q3SXP7 199 aa9.29□□□□□ -0.92
SF3B3-206ENST00000565990 DEFB121Q5J5C9 76 aa9.29□□□□□ -0.92
SF3B3-206ENST00000565990 RCHY1Q96PM5 261 aa9.29□□□□□ -0.92
SF3B3-206ENST00000565990 AAMDCQ9H7C9 122 aa9.29□□□□□ -0.92
SF3B3-206ENST00000565990 MRPS16Q9Y3D3 137 aaKnown RBP9.29□□□□□ -0.92
SF3B3-206ENST00000565990 KNCNA6PVL3 124 aa9.28□□□□□ -0.92
SF3B3-206ENST00000565990 PRAC2D3DTV9 90 aa9.28□□□□□ -0.92
SF3B3-206ENST00000565990 IGLC3P0DOY3 106 aa9.28□□□□□ -0.92
SF3B3-206ENST00000565990 HLA-DRB4P13762 266 aa9.28□□□□□ -0.92
SF3B3-206ENST00000565990 DEFB1P60022 68 aa9.28□□□□□ -0.92
SF3B3-206ENST00000565990 SPATA45Q537H7 98 aa9.28□□□□□ -0.92
SF3B3-206ENST00000565990 COL5A1-AS1Q5SY13 56 aa9.28□□□□□ -0.92
SF3B3-206ENST00000565990 GDF5OSQ5U4N7 250 aa9.28□□□□□ -0.92
SF3B3-206ENST00000565990 TRPT1Q86TN4 253 aaKnown RBP9.28□□□□□ -0.92
SF3B3-206ENST00000565990 PAM16Q9Y3D7 125 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms