RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 F5H768 121 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 GCGP01275 180 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 AKR1C3P42330 323 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 UBE2G1P62253 170 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 TMEM183BQ1AE95 376 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 TDRG1Q3Y452 100 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 TMEM88Q6PEY1 159 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 TMEM183AQ8IXX5 376 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 C11orf21Q9P2W6 132 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 NAGKQ9UJ70 344 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 GAGE12BA1L429 117 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 GAGE7O76087 117 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 PFN1P07737 140 aaKnown RBP9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 GAGE12FP0CL80 117 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 GAGE12GP0CL81 117 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 GAGE12IP0CL82 117 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 P0DMU3 169 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 FAM231AP0DMU4 169 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 FAM231CP0DMU5 169 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 ZNF415Q09FC8 603 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 Q6ZTI0 123 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 MDFICQ9P1T7 246 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 ZFP30Q9Y2G7 519 aa9.74□□□□□ -0.85
HERPUD1-210ENST00000565966 TRGV11A0A075B6L2 103 aa9.73□□□□□ -0.85
HERPUD1-210ENST00000565966 GNRH2O43555 120 aa9.73□□□□□ -0.85
HERPUD1-210ENST00000565966 SPINK4O60575 86 aa9.73□□□□□ -0.85
HERPUD1-210ENST00000565966 COX8CQ7Z4L0 72 aa9.73□□□□□ -0.85
HERPUD1-210ENST00000565966 C15orf53Q8NAA6 179 aa9.73□□□□□ -0.85
HERPUD1-210ENST00000565966 TRGV1A0A0A0MS02 117 aa9.72□□□□□ -0.85
HERPUD1-210ENST00000565966 LTAP01374 205 aa9.72□□□□□ -0.85
HERPUD1-210ENST00000565966 TYMSP04818 313 aa9.72□□□□□ -0.85
HERPUD1-210ENST00000565966 BLOC1S1P78537 153 aa9.72□□□□□ -0.85
HERPUD1-210ENST00000565966 C11orf52Q96A22 123 aa9.72□□□□□ -0.85
HERPUD1-210ENST00000565966 ZC2HC1AQ96GY0 325 aa9.72□□□□□ -0.85
HERPUD1-210ENST00000565966 KCNS1Q96KK3 526 aa9.72□□□□□ -0.85
HERPUD1-210ENST00000565966 TXNDC17Q9BRA2 123 aa9.72□□□□□ -0.85
HERPUD1-210ENST00000565966 SDF2L1Q9HCN8 221 aa9.72□□□□□ -0.85
HERPUD1-210ENST00000565966 IGHV3-16A0A0C4DH30 117 aa9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 FABP5P3A8MUU1 101 aa9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 IFNA1P01562 189 aa9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 S100A9P06702 114 aaKnown RBP9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 BCL2P10415 239 aa9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 CRIP1P50238 77 aa9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 POM121L12Q8N7R1 296 aa9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 C18orf15Q96N68 181 aa9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 SPXQ9BT56 116 aa9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 MRPL16Q9NX20 251 aaKnown RBP9.71□□□□□ -0.86
HERPUD1-210ENST00000565966 TRGV2A0A075B6R0 118 aa9.7□□□□□ -0.86
HERPUD1-210ENST00000565966 MEF2BQ02080 365 aaPredicted RBP9.7□□□□□ -0.86
HERPUD1-210ENST00000565966 OR5I1Q13606 314 aa9.7□□□□□ -0.86
HERPUD1-210ENST00000565966 LGALS9BQ3B8N2 356 aa9.7□□□□□ -0.86
HERPUD1-210ENST00000565966 LYPD6BQ8NI32 183 aa9.7□□□□□ -0.86
HERPUD1-210ENST00000565966 IGKV3D-20A0A0C4DH25 116 aa9.69□□□□□ -0.86
HERPUD1-210ENST00000565966 RNF212Q495C1 297 aa9.69□□□□□ -0.86
HERPUD1-210ENST00000565966 BAGE2Q86Y30 109 aa9.69□□□□□ -0.86
HERPUD1-210ENST00000565966 UBE2DNLQ8IWF7 75 aa9.69□□□□□ -0.86
HERPUD1-210ENST00000565966 NHLRC2Q8NBF2 726 aa9.69□□□□□ -0.86
HERPUD1-210ENST00000565966 DERL1Q9BUN8 251 aa9.69□□□□□ -0.86
HERPUD1-210ENST00000565966 VAX2Q9UIW0 290 aa9.69□□□□□ -0.86
HERPUD1-210ENST00000565966 DNAH6Q9C0G6 4158 aa9.69□□□□□ -0.86
HERPUD1-210ENST00000565966 PDE6DO43924 150 aa9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 SH2D1AO60880 128 aa9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 NUDT3O95989 172 aa9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 HOXA5P20719 270 aa9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 TAGLN2P37802 199 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 RPL35P42766 123 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 ZNF674Q2M3X9 581 aa9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 FAM162BQ5T6X4 162 aa9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 RASL10AQ92737 203 aa9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 MLST8Q9BVC4 326 aa9.68□□□□□ -0.86
HERPUD1-210ENST00000565966 TRAV26-1A0A087WT03 109 aa9.67□□□□□ -0.86
HERPUD1-210ENST00000565966 M0R2P5 195 aa9.67□□□□□ -0.86
HERPUD1-210ENST00000565966 B4DEV8 164 aa9.66□□□□□ -0.86
HERPUD1-210ENST00000565966 KRBOX1C9JBD0 128 aa9.66□□□□□ -0.86
HERPUD1-210ENST00000565966 H3BNG1 76 aa9.66□□□□□ -0.86
HERPUD1-210ENST00000565966 IGHV3-53P01767 116 aa9.66□□□□□ -0.86
HERPUD1-210ENST00000565966 ORM1P02763 201 aa9.66□□□□□ -0.86
HERPUD1-210ENST00000565966 RNASE3P12724 160 aaKnown RBP9.66□□□□□ -0.86
HERPUD1-210ENST00000565966 TEX261Q6UWH6 196 aa9.66□□□□□ -0.86
HERPUD1-210ENST00000565966 C9orf85Q96MD7 179 aa9.66□□□□□ -0.86
HERPUD1-210ENST00000565966 MED9Q9NWA0 146 aa9.66□□□□□ -0.86
HERPUD1-210ENST00000565966 A0A0J9YY99 117 aa9.65□□□□□ -0.86
HERPUD1-210ENST00000565966 RAB19A4D1S5 217 aa9.65□□□□□ -0.86
HERPUD1-210ENST00000565966 RBFOX3A6NFN3 312 aa9.65□□□□□ -0.86
HERPUD1-210ENST00000565966 M0R036 132 aa9.65□□□□□ -0.86
HERPUD1-210ENST00000565966 LINC01559Q495D7 138 aa9.65□□□□□ -0.86
HERPUD1-210ENST00000565966 CENPWQ5EE01 88 aa9.65□□□□□ -0.86
HERPUD1-210ENST00000565966 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
HERPUD1-210ENST00000565966 IGLV2-8P01709 118 aa9.64□□□□□ -0.87
HERPUD1-210ENST00000565966 S100A4P26447 101 aaKnown RBP9.64□□□□□ -0.87
HERPUD1-210ENST00000565966 ASIPP42127 132 aa9.64□□□□□ -0.87
HERPUD1-210ENST00000565966 FAM3BP58499 235 aaPredicted RBP9.64□□□□□ -0.87
HERPUD1-210ENST00000565966 ZNF506Q5JVG8 444 aa9.64□□□□□ -0.87
HERPUD1-210ENST00000565966 DNLZQ5SXM8 178 aa9.64□□□□□ -0.87
HERPUD1-210ENST00000565966 PTH2Q96A98 100 aa9.64□□□□□ -0.87
HERPUD1-210ENST00000565966 TRBV20OR9-2A0A075B6H5 130 aa9.63□□□□□ -0.87
HERPUD1-210ENST00000565966 GRIFINA4D1Z8 144 aa9.63□□□□□ -0.87
HERPUD1-210ENST00000565966 PGPEP1LA6NFU8 196 aa9.63□□□□□ -0.87
HERPUD1-210ENST00000565966 C9JCJ5 164 aa9.63□□□□□ -0.87
HERPUD1-210ENST00000565966 SFTA3P0C7M3 94 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms