RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 TEX261Q6UWH6 196 aa8.95□□□□□ -0.98
SHCBP1-204ENST00000565887 BAGE2Q86Y30 109 aa8.95□□□□□ -0.98
SHCBP1-204ENST00000565887 LINC00612Q8N6U2 182 aa8.95□□□□□ -0.98
SHCBP1-204ENST00000565887 NAGKQ9UJ70 344 aa8.95□□□□□ -0.98
SHCBP1-204ENST00000565887 SCO2A0A1W2PP80 73 aa8.94□□□□□ -0.98
SHCBP1-204ENST00000565887 IGLL5B9A064 214 aa8.94□□□□□ -0.98
SHCBP1-204ENST00000565887 SPINK4O60575 86 aa8.94□□□□□ -0.98
SHCBP1-204ENST00000565887 SMIM12Q96EX1 92 aa8.94□□□□□ -0.98
SHCBP1-204ENST00000565887 BIN3Q9NQY0 253 aa8.94□□□□□ -0.98
SHCBP1-204ENST00000565887 TENM2Q9NT68 2774 aa8.94□□□□□ -0.98
SHCBP1-204ENST00000565887 TRGV2A0A075B6R0 118 aa8.93□□□□□ -0.98
SHCBP1-204ENST00000565887 RBFOX3A6NFN3 312 aa8.93□□□□□ -0.98
SHCBP1-204ENST00000565887 RPL35P42766 123 aaKnown RBP8.93□□□□□ -0.98
SHCBP1-204ENST00000565887 ZNF80P51504 273 aaPredicted RBP8.93□□□□□ -0.98
SHCBP1-204ENST00000565887 ZNF674Q2M3X9 581 aa8.93□□□□□ -0.98
SHCBP1-204ENST00000565887 Q6ZQT7 251 aa8.93□□□□□ -0.98
SHCBP1-204ENST00000565887 ZNF767PQ75MW2 155 aa8.93□□□□□ -0.98
SHCBP1-204ENST00000565887 NDUFAF3Q9BU61 184 aa8.93□□□□□ -0.98
SHCBP1-204ENST00000565887 MED9Q9NWA0 146 aa8.93□□□□□ -0.98
SHCBP1-204ENST00000565887 TRGV1A0A0A0MS02 117 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 IGHV3-16A0A0C4DH30 117 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 GAGE12BA1L429 117 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 TMEM250H0YL14 139 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 GNRH2O43555 120 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 GAGE7O76087 117 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 ORM1P02763 201 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 GAGE12FP0CL80 117 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 GAGE12GP0CL81 117 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 GAGE12IP0CL82 117 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 SLAQ13239 276 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 RASL10AQ92737 203 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 PTH2Q96A98 100 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 ZC2HC1AQ96GY0 325 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 MLST8Q9BVC4 326 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 MDFICQ9P1T7 246 aa8.92□□□□□ -0.98
SHCBP1-204ENST00000565887 IGHV4-4A0A075B6R2 117 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 F5H768 121 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 M0R2P5 195 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 CIDEAO60543 219 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 TYMSP04818 313 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 HTN3P15516 51 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 ZNF506Q5JVG8 444 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 DNLZQ5SXM8 178 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 Q6ZTI0 123 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 C15orf53Q8NAA6 179 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 CSMD3Q7Z407 3707 aa8.91□□□□□ -0.98
SHCBP1-204ENST00000565887 B4DEV8 164 aa8.9□□□□□ -0.98
SHCBP1-204ENST00000565887 GNG4P50150 75 aa8.9□□□□□ -0.98
SHCBP1-204ENST00000565887 PIK3CD-AS1Q5SR53 167 aa8.9□□□□□ -0.98
SHCBP1-204ENST00000565887 DAZAP1Q96EP5 407 aaKnown RBP8.9□□□□□ -0.98
SHCBP1-204ENST00000565887 EIF5A2Q9GZV4 153 aaKnown RBP8.9□□□□□ -0.98
SHCBP1-204ENST00000565887 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
SHCBP1-204ENST00000565887 APLNQ9ULZ1 77 aa8.9□□□□□ -0.98
SHCBP1-204ENST00000565887 LCE6AA0A183 80 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 KRBOX1C9JBD0 128 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 H3BNG1 76 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 SH2D1AO60880 128 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 ASIPP42127 132 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 CRIP1P50238 77 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 RAB14P61106 215 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 LINC01559Q495D7 138 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 LGALS9CQ6DKI2 356 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 FAM210AQ96ND0 272 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 C11orf21Q9P2W6 132 aa8.89□□□□□ -0.99
SHCBP1-204ENST00000565887 IGKV3D-20A0A0C4DH25 116 aa8.88□□□□□ -0.99
SHCBP1-204ENST00000565887 CXCL1P09341 107 aa8.88□□□□□ -0.99
SHCBP1-204ENST00000565887 IL36BQ9NZH7 164 aa8.88□□□□□ -0.99
SHCBP1-204ENST00000565887 C9JCJ5 164 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 P0DMU3 169 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 FAM231AP0DMU4 169 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 FAM231CP0DMU5 169 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 OR5I1Q13606 314 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 PEA15Q15121 130 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 ZNF876PQ49A33 203 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 CENPWQ5EE01 88 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 C9orf85Q96MD7 179 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 DERL1Q9BUN8 251 aa8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 MRPL16Q9NX20 251 aaKnown RBP8.87□□□□□ -0.99
SHCBP1-204ENST00000565887 TRAV4A0A0B4J268 109 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 XKRY2A2RUG3 117 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 RAB19A4D1S5 217 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 MGST1P10620 155 aaKnown RBP8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 RNASE3P12724 160 aaKnown RBP8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 RPS20P60866 119 aaKnown RBP8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 TOR2AQ5JU69 321 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 TMEM88Q6PEY1 159 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 NHLRC2Q8NBF2 726 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 SYT8Q8NBV8 401 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 LY96Q9Y6Y9 160 aa8.86□□□□□ -0.99
SHCBP1-204ENST00000565887 TRGV4A0A0C4DH28 118 aa8.85□□□□□ -0.99
SHCBP1-204ENST00000565887 M0R036 132 aa8.85□□□□□ -0.99
SHCBP1-204ENST00000565887 FAM74A3Q4VXF1 159 aa8.85□□□□□ -0.99
SHCBP1-204ENST00000565887 PRR27Q6MZM9 219 aa8.85□□□□□ -0.99
SHCBP1-204ENST00000565887 LINC00476Q8WZB0 136 aa8.85□□□□□ -0.99
SHCBP1-204ENST00000565887 PARLQ9H300 379 aa8.85□□□□□ -0.99
SHCBP1-204ENST00000565887 PRO0255Q9UI72 69 aa8.85□□□□□ -0.99
SHCBP1-204ENST00000565887 HHLA3Q9XRX5 114 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms