RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ZNF80P51504 273 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-209ENST00000565511 TREM1Q9NP99 234 aa16.09■□□□□ 0.17
RAB40C-209ENST00000565511 SCRT2Q9NQ03 307 aa16.09■□□□□ 0.17
RAB40C-209ENST00000565511 M0R2P5 195 aa16.08■□□□□ 0.16
RAB40C-209ENST00000565511 HSD17B11Q8NBQ5 300 aa16.08■□□□□ 0.16
RAB40C-209ENST00000565511 TRAV21A0A0B4J279 112 aa16.07■□□□□ 0.16
RAB40C-209ENST00000565511 CDC34P49427 236 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-209ENST00000565511 Q5BKY6 102 aa16.07■□□□□ 0.16
RAB40C-209ENST00000565511 FAT1Q14517 4588 aa16.07■□□□□ 0.16
RAB40C-209ENST00000565511 STAG3L2P0CL84 134 aa16.06■□□□□ 0.16
RAB40C-209ENST00000565511 STAG3L3P0CL85 134 aa16.06■□□□□ 0.16
RAB40C-209ENST00000565511 FAM74A1Q5RGS3 127 aa16.06■□□□□ 0.16
RAB40C-209ENST00000565511 ARL6IP6Q8N6S5 226 aa16.06■□□□□ 0.16
RAB40C-209ENST00000565511 OR4C5Q8NGB2 326 aa16.06■□□□□ 0.16
RAB40C-209ENST00000565511 OR2G3Q8NGZ4 309 aa16.06■□□□□ 0.16
RAB40C-209ENST00000565511 PCNPQ8WW12 178 aaKnown RBP16.06■□□□□ 0.16
RAB40C-209ENST00000565511 SH3BGRL3Q9H299 93 aa16.06■□□□□ 0.16
RAB40C-209ENST00000565511 LY96Q9Y6Y9 160 aa16.06■□□□□ 0.16
RAB40C-209ENST00000565511 ATP6V0CP27449 155 aa16.05■□□□□ 0.16
RAB40C-209ENST00000565511 DPPA3Q6W0C5 159 aa16.05■□□□□ 0.16
RAB40C-209ENST00000565511 TMEM75Q8N9X5 138 aa16.05■□□□□ 0.16
RAB40C-209ENST00000565511 SUN5Q8TC36 379 aa16.05■□□□□ 0.16
RAB40C-209ENST00000565511 RAB24Q969Q5 203 aa16.05■□□□□ 0.16
RAB40C-209ENST00000565511 IGLV2-11P01706 119 aa16.04■□□□□ 0.16
RAB40C-209ENST00000565511 ORM1P02763 201 aa16.04■□□□□ 0.16
RAB40C-209ENST00000565511 GATA1P15976 413 aaPredicted RBP16.04■□□□□ 0.16
RAB40C-209ENST00000565511 GCHFRP30047 84 aa16.04■□□□□ 0.16
RAB40C-209ENST00000565511 ERVFC1-1P60608 527 aa16.04■□□□□ 0.16
RAB40C-209ENST00000565511 SDF2L1Q9HCN8 221 aa16.04■□□□□ 0.16
RAB40C-209ENST00000565511 A0A087WTM6 91 aa16.03■□□□□ 0.16
RAB40C-209ENST00000565511 GGTLC3B5MD39 225 aa16.03■□□□□ 0.16
RAB40C-209ENST00000565511 TCRAP04437 139 aa16.03■□□□□ 0.16
RAB40C-209ENST00000565511 ASB13Q8WXK3 278 aa16.03■□□□□ 0.16
RAB40C-209ENST00000565511 AQP10Q96PS8 301 aa16.03■□□□□ 0.16
RAB40C-209ENST00000565511 MSRB1Q9NZV6 116 aa16.03■□□□□ 0.16
RAB40C-209ENST00000565511 C9JCJ5 164 aa16.02■□□□□ 0.16
RAB40C-209ENST00000565511 C5orf17Q8NAS9 161 aa16.02■□□□□ 0.16
RAB40C-209ENST00000565511 PSMG3Q9BT73 122 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-209ENST00000565511 KRTAP10-1P60331 282 aa16.01■□□□□ 0.15
RAB40C-209ENST00000565511 TXNDC17Q9BRA2 123 aa16.01■□□□□ 0.15
RAB40C-209ENST00000565511 PSG8Q9UQ74 426 aa16.01■□□□□ 0.15
RAB40C-209ENST00000565511 XGP55808 180 aa16■□□□□ 0.15
RAB40C-209ENST00000565511 NFE4Q86UQ8 179 aa16■□□□□ 0.15
RAB40C-209ENST00000565511 PGPEP1Q9NXJ5 209 aa16■□□□□ 0.15
RAB40C-209ENST00000565511 VPS13BQ7Z7G8 4022 aa15.99■□□□□ 0.15
RAB40C-209ENST00000565511 IGHV3-73A0A0B4J1V6 119 aa15.99■□□□□ 0.15
RAB40C-209ENST00000565511 RS1O15537 224 aa15.99■□□□□ 0.15
RAB40C-209ENST00000565511 GCGP01275 180 aa15.99■□□□□ 0.15
RAB40C-209ENST00000565511 CFAP126Q5VTH2 177 aa15.99■□□□□ 0.15
RAB40C-209ENST00000565511 SLC25A29Q8N8R3 303 aa15.99■□□□□ 0.15
RAB40C-209ENST00000565511 NHLRC2Q8NBF2 726 aa15.99■□□□□ 0.15
RAB40C-209ENST00000565511 KCNS1Q96KK3 526 aa15.99■□□□□ 0.15
RAB40C-209ENST00000565511 C9orf85Q96MD7 179 aa15.99■□□□□ 0.15
RAB40C-209ENST00000565511 CRYGDP07320 174 aa15.98■□□□□ 0.15
RAB40C-209ENST00000565511 EVI2AP22794 236 aa15.98■□□□□ 0.15
RAB40C-209ENST00000565511 SUMO1P63165 101 aaKnown RBP15.98■□□□□ 0.15
RAB40C-209ENST00000565511 ZNF876PQ49A33 203 aa15.98■□□□□ 0.15
RAB40C-209ENST00000565511 MED28Q9H204 178 aa15.98■□□□□ 0.15
RAB40C-209ENST00000565511 TRAV9-2A0A087WT02 112 aa15.97■□□□□ 0.15
RAB40C-209ENST00000565511 SERTM2A0A1B0GWG4 89 aa15.97■□□□□ 0.15
RAB40C-209ENST00000565511 PGPEP1LA6NFU8 196 aa15.97■□□□□ 0.15
RAB40C-209ENST00000565511 FBLL1A6NHQ2 334 aaKnown RBP15.97■□□□□ 0.15
RAB40C-209ENST00000565511 ZNF726P1Q15940 193 aa15.97■□□□□ 0.15
RAB40C-209ENST00000565511 PRNTQ86SH4 94 aa15.97■□□□□ 0.15
RAB40C-209ENST00000565511 NDFIP1Q9BT67 221 aa15.97■□□□□ 0.15
RAB40C-209ENST00000565511 EPDR1Q9UM22 224 aa15.97■□□□□ 0.15
RAB40C-209ENST00000565511 RNF222A6NCQ9 220 aa15.96■□□□□ 0.15
RAB40C-209ENST00000565511 EREGO14944 169 aa15.96■□□□□ 0.15
RAB40C-209ENST00000565511 PTTG1O95997 202 aa15.96■□□□□ 0.15
RAB40C-209ENST00000565511 RNASE3P12724 160 aaKnown RBP15.96■□□□□ 0.15
RAB40C-209ENST00000565511 TIRAPP58753 221 aa15.96■□□□□ 0.15
RAB40C-209ENST00000565511 FLI1Q01543 452 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-209ENST00000565511 ZNF506Q5JVG8 444 aa15.96■□□□□ 0.15
RAB40C-209ENST00000565511 RPL7L1Q6DKI1 246 aaKnown RBP15.96■□□□□ 0.15
RAB40C-209ENST00000565511 CDPF1Q6NVV7 123 aa15.96■□□□□ 0.15
RAB40C-209ENST00000565511 LINC00479Q96M42 142 aa15.96■□□□□ 0.15
RAB40C-209ENST00000565511 DNAH8Q96JB1 4490 aa15.95■□□□□ 0.14
RAB40C-209ENST00000565511 TRAV34A0A0B4J273 112 aa15.95■□□□□ 0.14
RAB40C-209ENST00000565511 PFN1P07737 140 aaKnown RBP15.95■□□□□ 0.14
RAB40C-209ENST00000565511 PPT1P50897 306 aa15.95■□□□□ 0.14
RAB40C-209ENST00000565511 SERF2P84101 59 aa15.94■□□□□ 0.14
RAB40C-209ENST00000565511 Q6ZSN1 163 aa15.94■□□□□ 0.14
RAB40C-209ENST00000565511 CYB561D1Q8N8Q1 229 aa15.94■□□□□ 0.14
RAB40C-209ENST00000565511 TAAR5O14804 337 aa15.93■□□□□ 0.14
RAB40C-209ENST00000565511 CXorf1O96002 111 aa15.93■□□□□ 0.14
RAB40C-209ENST00000565511 SMUG1Q53HV7 270 aa15.93■□□□□ 0.14
RAB40C-209ENST00000565511 ACTR3CQ9C0K3 210 aaPredicted RBP15.93■□□□□ 0.14
RAB40C-209ENST00000565511 TMEM167BQ9NRX6 74 aa15.93■□□□□ 0.14
RAB40C-209ENST00000565511 TNFSF18Q9UNG2 199 aa15.93■□□□□ 0.14
RAB40C-209ENST00000565511 IGKV3D-20A0A0C4DH25 116 aa15.92■□□□□ 0.14
RAB40C-209ENST00000565511 IGHV3-38A0A0C4DH36 116 aa15.92■□□□□ 0.14
RAB40C-209ENST00000565511 K7EP13 123 aa15.92■□□□□ 0.14
RAB40C-209ENST00000565511 MBP02144 154 aa15.92■□□□□ 0.14
RAB40C-209ENST00000565511 GIPP09681 153 aaPredicted RBP15.92■□□□□ 0.14
RAB40C-209ENST00000565511 LINC01556Q5JQF7 62 aa15.92■□□□□ 0.14
RAB40C-209ENST00000565511 LRCOL1A6NCL2 159 aa15.91■□□□□ 0.14
RAB40C-209ENST00000565511 G3V3Q6 166 aa15.91■□□□□ 0.14
RAB40C-209ENST00000565511 SH2D6Q7Z4S9 175 aa15.91■□□□□ 0.14
RAB40C-209ENST00000565511 Q8N3U1 123 aa15.91■□□□□ 0.14
RAB40C-209ENST00000565511 C10orf126Q8N4M7 172 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms