RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ZNF876PQ49A33 203 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 PRNTQ86SH4 94 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 ARL6IP6Q8N6S5 226 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 INO80EQ8NBZ0 244 aaPredicted RBP4.38□□□□□ -1.71
TCF4-228ENST00000565393 RAB24Q969Q5 203 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 TVP23CQ96ET8 276 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 ACTR3CQ9C0K3 210 aaPredicted RBP4.38□□□□□ -1.71
TCF4-228ENST00000565393 SCRT2Q9NQ03 307 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 EPDR1Q9UM22 224 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 PSG8Q9UQ74 426 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 ALMS1Q8TCU4 4167 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 hCG_2014768A0A024R1R8 64 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 LOC100131303A0A0U1RQF7 123 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 SERTM2A0A1B0GWG4 89 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 CXorf1O96002 111 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 IFNA7P01567 189 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 TCRAP04437 139 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 TYMSP04818 313 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 PFN1P07737 140 aaKnown RBP4.37□□□□□ -1.71
TCF4-228ENST00000565393 STAG3L2P0CL84 134 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 STAG3L3P0CL85 134 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 ATP6V0CP27449 155 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 GCHFRP30047 84 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 PPT1P50897 306 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 SERF2P84101 59 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 SMUG1Q53HV7 270 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 SAPCD1Q5SSQ6 148 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 WFDC10BQ8IUB3 73 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 SLC7A5P1Q8MH63 180 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 PRADC1Q9BSG0 188 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 MSRB1Q9NZV6 116 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 TNFSF18Q9UNG2 199 aa4.37□□□□□ -1.71
TCF4-228ENST00000565393 BORCS7-ASMTA0A0B4J1R7 106 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 TRAV8-6A0A0B4J262 113 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 FBLL1A6NHQ2 334 aaKnown RBP4.36□□□□□ -1.71
TCF4-228ENST00000565393 K7EP13 123 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 PSCAO43653 123 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 CIDEAO60543 219 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 GCGP01275 180 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 CRYGDP07320 174 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 S100A4P26447 101 aaKnown RBP4.36□□□□□ -1.71
TCF4-228ENST00000565393 ZNF80P51504 273 aaPredicted RBP4.36□□□□□ -1.71
TCF4-228ENST00000565393 FLI1Q01543 452 aaPredicted RBP4.36□□□□□ -1.71
TCF4-228ENST00000565393 ZFP69Q49AA0 526 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 Q5BKY6 102 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 Q8N1X5 172 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 C5orf17Q8NAS9 161 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 OR2G3Q8NGZ4 309 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 LINC00479Q96M42 142 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 AQP10Q96PS8 301 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 PSMG3Q9BT73 122 aaPredicted RBP4.36□□□□□ -1.71
TCF4-228ENST00000565393 SH3BGRL3Q9H299 93 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 TMEM167BQ9NRX6 74 aa4.36□□□□□ -1.71
TCF4-228ENST00000565393 A0A087WTM6 91 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 FXYD6-FXYD2A0A087WZ82 144 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 TRAV34A0A0B4J273 112 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 IGHV3-38A0A0C4DH36 116 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 PGPEP1LA6NFU8 196 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 FABP5P3A8MUU1 101 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 RS1O15537 224 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 PTTG1O95997 202 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 GATA1P15976 413 aaPredicted RBP4.35□□□□□ -1.71
TCF4-228ENST00000565393 S100A1P23297 94 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 LGALSLQ3ZCW2 172 aaPredicted RBP4.35□□□□□ -1.71
TCF4-228ENST00000565393 OR10J3Q5JRS4 329 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 CFAP126Q5VTH2 177 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 RPL7L1Q6DKI1 246 aaKnown RBP4.35□□□□□ -1.71
TCF4-228ENST00000565393 Q6ZRN7 208 aaPredicted RBP4.35□□□□□ -1.71
TCF4-228ENST00000565393 SLC25A29Q8N8R3 303 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 TMEM75Q8N9X5 138 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 C11orf21Q9P2W6 132 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 PCLOQ9Y6V0 5065 aa4.35□□□□□ -1.71
TCF4-228ENST00000565393 TRBV6-4A0A1B0GX49 114 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 EPM2AB3EWF7 344 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 IGLV2-11P01706 119 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 IGHV3-30P01768 117 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 IGHV3-33P01772 117 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 GIPP09681 153 aaPredicted RBP4.34□□□□□ -1.71
TCF4-228ENST00000565393 IGHV3-30-3P0DP02 117 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 IGHV3-30-5P0DP03 117 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 UBE2G2P60604 165 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 AKR1C8PQ5T2L2 129 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 DPPA3Q6W0C5 159 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 C10orf126Q8N4M7 172 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 CYB561D1Q8N8Q1 229 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 OR2T35Q8NGX2 323 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 ATP6V0E2Q8NHE4 81 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 SUN5Q8TC36 379 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 Q9HAA7 133 aa4.34□□□□□ -1.71
TCF4-228ENST00000565393 A0A1W2PRE2 83 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 GAGE12JA6NER3 117 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 GGTLC3B5MD39 225 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 MGST1P10620 155 aaKnown RBP4.33□□□□□ -1.72
TCF4-228ENST00000565393 RNASE3P12724 160 aaKnown RBP4.33□□□□□ -1.72
TCF4-228ENST00000565393 GCSHP23434 173 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 ASIPP42127 132 aa4.33□□□□□ -1.72
TCF4-228ENST00000565393 FGF8P55075 233 aaPredicted RBP4.33□□□□□ -1.72
TCF4-228ENST00000565393 GAGE1Q13065 139 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms