RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PSG8Q9UQ74 426 aa9.54□□□□□ -0.88
VPS9D1-204ENST00000565023 TRGV2A0A075B6R0 118 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 IGHV1OR15-1A0A075B7D0 117 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 PEX7O00628 323 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 PAGE4O60829 102 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 PPT1P50897 306 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 ANXA2RQ3ZCQ2 193 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 CST9LP1Q5W188 147 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 LINC00612Q8N6U2 182 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 C11orf72Q8NBR9 251 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 TREM1Q9NP99 234 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 BOLA1Q9Y3E2 137 aa9.53□□□□□ -0.88
VPS9D1-204ENST00000565023 PRSS29PA6NIE9 313 aa9.52□□□□□ -0.89
VPS9D1-204ENST00000565023 IGHV3-53P01767 116 aa9.52□□□□□ -0.89
VPS9D1-204ENST00000565023 CCL20P78556 96 aa9.52□□□□□ -0.89
VPS9D1-204ENST00000565023 DAZ2Q13117 558 aaKnown RBP9.52□□□□□ -0.89
VPS9D1-204ENST00000565023 LGALS9BQ3B8N2 356 aa9.52□□□□□ -0.89
VPS9D1-204ENST00000565023 NDFIP1Q9BT67 221 aa9.52□□□□□ -0.89
VPS9D1-204ENST00000565023 MRPL16Q9NX20 251 aaKnown RBP9.52□□□□□ -0.89
VPS9D1-204ENST00000565023 NAGKQ9UJ70 344 aa9.52□□□□□ -0.89
VPS9D1-204ENST00000565023 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
VPS9D1-204ENST00000565023 F6UZH7 168 aa9.51□□□□□ -0.89
VPS9D1-204ENST00000565023 TEX46H3BTG2 121 aa9.51□□□□□ -0.89
VPS9D1-204ENST00000565023 RTL8CO15255 209 aa9.51□□□□□ -0.89
VPS9D1-204ENST00000565023 CCL18P55774 89 aa9.51□□□□□ -0.89
VPS9D1-204ENST00000565023 SAPCD1Q5SSQ6 148 aa9.51□□□□□ -0.89
VPS9D1-204ENST00000565023 PRNTQ86SH4 94 aa9.51□□□□□ -0.89
VPS9D1-204ENST00000565023 MANBALQ9NQG1 85 aa9.51□□□□□ -0.89
VPS9D1-204ENST00000565023 LINC00588Q9Y4M8 146 aa9.51□□□□□ -0.89
VPS9D1-204ENST00000565023 TRAV21A0A0B4J279 112 aa9.5□□□□□ -0.89
VPS9D1-204ENST00000565023 TCL1AP56279 114 aa9.5□□□□□ -0.89
VPS9D1-204ENST00000565023 ZNF415Q09FC8 603 aa9.5□□□□□ -0.89
VPS9D1-204ENST00000565023 TDRG1Q3Y452 100 aa9.5□□□□□ -0.89
VPS9D1-204ENST00000565023 ALKAL2Q6UX46 152 aa9.5□□□□□ -0.89
VPS9D1-204ENST00000565023 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
VPS9D1-204ENST00000565023 C8orf49Q96NF6 230 aa9.5□□□□□ -0.89
VPS9D1-204ENST00000565023 MUC4Q99102 2169 aa9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 TRBV6-1A0A0K0K1D8 114 aa9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 SPINK4O60575 86 aa9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 ZNF80P51504 273 aaPredicted RBP9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 TMEM183BQ1AE95 376 aa9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 IBA57Q5T440 356 aaKnown RBP9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 Q6ZR54 194 aa9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 Q86TA4 180 aa9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 TMEM183AQ8IXX5 376 aa9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 FMC1Q96HJ9 113 aa9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 GNG13Q9P2W3 67 aa9.49□□□□□ -0.89
VPS9D1-204ENST00000565023 GCGP01275 180 aa9.48□□□□□ -0.89
VPS9D1-204ENST00000565023 SMUG1Q53HV7 270 aa9.48□□□□□ -0.89
VPS9D1-204ENST00000565023 FAM159AQ6UWV7 190 aa9.48□□□□□ -0.89
VPS9D1-204ENST00000565023 COX8CQ7Z4L0 72 aa9.48□□□□□ -0.89
VPS9D1-204ENST00000565023 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
VPS9D1-204ENST00000565023 MDFICQ9P1T7 246 aa9.48□□□□□ -0.89
VPS9D1-204ENST00000565023 ZFP30Q9Y2G7 519 aa9.48□□□□□ -0.89
VPS9D1-204ENST00000565023 SCO2A0A1W2PP80 73 aa9.47□□□□□ -0.89
VPS9D1-204ENST00000565023 PFN1P07737 140 aaKnown RBP9.47□□□□□ -0.89
VPS9D1-204ENST00000565023 AKR1C3P42330 323 aa9.47□□□□□ -0.89
VPS9D1-204ENST00000565023 FAM3BP58499 235 aaPredicted RBP9.47□□□□□ -0.89
VPS9D1-204ENST00000565023 UBE2G1P62253 170 aa9.47□□□□□ -0.89
VPS9D1-204ENST00000565023 SOHLH1Q5JUK2 328 aa9.47□□□□□ -0.89
VPS9D1-204ENST00000565023 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
VPS9D1-204ENST00000565023 TXNDC17Q9BRA2 123 aa9.47□□□□□ -0.89
VPS9D1-204ENST00000565023 PKHD1P08F94 4074 aa9.46□□□□□ -0.89
VPS9D1-204ENST00000565023 TRGV11A0A075B6L2 103 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 NBDYA0A0U1RRE5 68 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 LTAP01374 205 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 S100A9P06702 114 aaKnown RBP9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 BLOC1S1P78537 153 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 ESRGQ1W209 222 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 LYPD6BQ8NI32 183 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 C11orf52Q96A22 123 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 VSIG2Q96IQ7 327 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 C11orf21Q9P2W6 132 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 DNAH2Q9P225 4427 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.9
VPS9D1-204ENST00000565023 A0A096LPF7 62 aa9.45□□□□□ -0.9
VPS9D1-204ENST00000565023 GNRH2O43555 120 aa9.45□□□□□ -0.9
VPS9D1-204ENST00000565023 IFNA1P01562 189 aa9.45□□□□□ -0.9
VPS9D1-204ENST00000565023 SFTA3P0C7M3 94 aa9.45□□□□□ -0.9
VPS9D1-204ENST00000565023 BCL2P10415 239 aa9.45□□□□□ -0.9
VPS9D1-204ENST00000565023 ZC2HC1AQ96GY0 325 aa9.45□□□□□ -0.9
VPS9D1-204ENST00000565023 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
VPS9D1-204ENST00000565023 C18orf15Q96N68 181 aa9.45□□□□□ -0.9
VPS9D1-204ENST00000565023 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 A0A1B0GVY2 172 aa9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 FABP5P3A8MUU1 101 aa9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 PAX4O43316 350 aa9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 TAGLN2P37802 199 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 CRIP1P50238 77 aa9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 MEF2BQ02080 365 aaPredicted RBP9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 Q9H8V8 135 aa9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 SDF2L1Q9HCN8 221 aa9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 DYNC1H1Q14204 4646 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-204ENST00000565023 TRGV4A0A0C4DH28 118 aa9.43□□□□□ -0.9
VPS9D1-204ENST00000565023 PDE6DO43924 150 aa9.43□□□□□ -0.9
VPS9D1-204ENST00000565023 TYMSP04818 313 aa9.43□□□□□ -0.9
VPS9D1-204ENST00000565023 C6orf223Q8N319 242 aa9.43□□□□□ -0.9
VPS9D1-204ENST00000565023 ZNF479Q96JC4 524 aa9.43□□□□□ -0.9
VPS9D1-204ENST00000565023 SPXQ9BT56 116 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms