RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ERCC8Q13216 396 aa12.6□□□□□ -0.39
LINC00554-201ENST00000564841 Q6ZQT7 251 aa12.6□□□□□ -0.39
LINC00554-201ENST00000564841 PLEKHB2Q96CS7 222 aa12.6□□□□□ -0.39
LINC00554-201ENST00000564841 RNF125Q96EQ8 232 aa12.6□□□□□ -0.39
LINC00554-201ENST00000564841 NCBP2LA6PVI3 153 aaKnown RBP12.59□□□□□ -0.39
LINC00554-201ENST00000564841 DLX4Q92988 240 aaPredicted RBP12.59□□□□□ -0.39
LINC00554-201ENST00000564841 SIGLEC9Q9Y336 463 aa12.59□□□□□ -0.39
LINC00554-201ENST00000564841 PLGLAQ15195 96 aa12.59□□□□□ -0.39
LINC00554-201ENST00000564841 LRRK2Q5S007 2527 aa12.59□□□□□ -0.39
LINC00554-201ENST00000564841 ATP5LO75964 103 aa12.59□□□□□ -0.39
LINC00554-201ENST00000564841 NHLRC4P0CG21 123 aaPredicted RBP12.59□□□□□ -0.39
LINC00554-201ENST00000564841 LOXP28300 417 aaPredicted RBP12.59□□□□□ -0.39
LINC00554-201ENST00000564841 KLHL30-AS1Q8NEE0 82 aa12.59□□□□□ -0.39
LINC00554-201ENST00000564841 MYOZ3Q8TDC0 251 aa12.59□□□□□ -0.39
LINC00554-201ENST00000564841 AAMDCQ9H7C9 122 aa12.59□□□□□ -0.39
LINC00554-201ENST00000564841 POLQO75417 2590 aa12.58□□□□□ -0.4
LINC00554-201ENST00000564841 LGALS1P09382 135 aaKnown RBP12.58□□□□□ -0.4
LINC00554-201ENST00000564841 CFAP161Q6P656 301 aa12.58□□□□□ -0.4
LINC00554-201ENST00000564841 NXT2Q9NPJ8 142 aaKnown RBP12.58□□□□□ -0.4
LINC00554-201ENST00000564841 IGLV2-18A0A075B6J9 118 aa12.58□□□□□ -0.4
LINC00554-201ENST00000564841 OR11H12B2RN74 326 aa12.58□□□□□ -0.4
LINC00554-201ENST00000564841 TEX36Q5VZQ5 186 aa12.58□□□□□ -0.4
LINC00554-201ENST00000564841 PVRIGQ6DKI7 326 aa12.58□□□□□ -0.4
LINC00554-201ENST00000564841 OR11H1Q8NG94 326 aa12.58□□□□□ -0.4
LINC00554-201ENST00000564841 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
LINC00554-201ENST00000564841 MYMXA0A1B0GTQ4 84 aa12.57□□□□□ -0.4
LINC00554-201ENST00000564841 K7EIM0 57 aa12.57□□□□□ -0.4
LINC00554-201ENST00000564841 AJUBAQ96IF1 538 aa12.57□□□□□ -0.4
LINC00554-201ENST00000564841 A0A087WX48 190 aa12.57□□□□□ -0.4
LINC00554-201ENST00000564841 HERV-K104P63124 156 aa12.57□□□□□ -0.4
LINC00554-201ENST00000564841 PPP1R27Q86WC6 154 aa12.57□□□□□ -0.4
LINC00554-201ENST00000564841 TNFRSF13BO14836 293 aaPredicted RBP12.56□□□□□ -0.4
LINC00554-201ENST00000564841 PRTN3P24158 256 aa12.56□□□□□ -0.4
LINC00554-201ENST00000564841 GAGE5Q13069 117 aa12.56□□□□□ -0.4
LINC00554-201ENST00000564841 GAGE6Q13070 117 aa12.56□□□□□ -0.4
LINC00554-201ENST00000564841 TAL2Q16559 108 aa12.56□□□□□ -0.4
LINC00554-201ENST00000564841 TCL1BO95988 128 aa12.56□□□□□ -0.4
LINC00554-201ENST00000564841 VPS13CQ709C8 3753 aa12.56□□□□□ -0.4
LINC00554-201ENST00000564841 CNIH1O95406 144 aa12.56□□□□□ -0.4
LINC00554-201ENST00000564841 Q8N8P6 123 aa12.56□□□□□ -0.4
LINC00554-201ENST00000564841 PRAC2D3DTV9 90 aa12.55□□□□□ -0.4
LINC00554-201ENST00000564841 CCDC179H3BU77 68 aa12.55□□□□□ -0.4
LINC00554-201ENST00000564841 IGHV1-8P0DP01 117 aa12.55□□□□□ -0.4
LINC00554-201ENST00000564841 EMP1P54849 157 aa12.55□□□□□ -0.4
LINC00554-201ENST00000564841 SRSF9Q13242 221 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00554-201ENST00000564841 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
LINC00554-201ENST00000564841 TMEM78Q5T7P6 136 aa12.55□□□□□ -0.4
LINC00554-201ENST00000564841 SMIM20Q8N5G0 67 aa12.55□□□□□ -0.4
LINC00554-201ENST00000564841 B9A039 149 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 SCGB1D4Q6XE38 83 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 CRLF1O75462 422 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 LAGE3Q14657 143 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 ZFAND6Q6FIF0 208 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 ANKRD29Q8N6D5 301 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 PPDPFLQ8WWR9 84 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 CFHR4Q92496 578 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 C11orf21Q9P2W6 132 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 IGHG4P01861 327 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 CRYGBP07316 175 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 TEX29Q8N6K0 151 aa12.54□□□□□ -0.4
LINC00554-201ENST00000564841 LINC01546A6NGU7 62 aa12.53□□□□□ -0.4
LINC00554-201ENST00000564841 TEN1Q86WV5 123 aa12.53□□□□□ -0.4
LINC00554-201ENST00000564841 LYPD1Q8N2G4 141 aa12.53□□□□□ -0.4
LINC00554-201ENST00000564841 PRADC1Q9BSG0 188 aa12.53□□□□□ -0.4
LINC00554-201ENST00000564841 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00554-201ENST00000564841 ZNF815PA8K554 130 aa12.53□□□□□ -0.4
LINC00554-201ENST00000564841 SLC25A16P16260 332 aa12.53□□□□□ -0.4
LINC00554-201ENST00000564841 CRIP2P52943 208 aaPredicted RBP12.53□□□□□ -0.4
LINC00554-201ENST00000564841 RNF182Q8N6D2 247 aa12.53□□□□□ -0.4
LINC00554-201ENST00000564841 PSMG3-AS1Q96PY0 264 aa12.53□□□□□ -0.4
LINC00554-201ENST00000564841 GNLYP22749 145 aa12.52□□□□□ -0.4
LINC00554-201ENST00000564841 DYNAPQ8N1N2 210 aa12.52□□□□□ -0.4
LINC00554-201ENST00000564841 ATP6V0E2Q8NHE4 81 aa12.52□□□□□ -0.4
LINC00554-201ENST00000564841 ONECUT1Q9UBC0 465 aa12.52□□□□□ -0.4
LINC00554-201ENST00000564841 ZNF672Q499Z4 452 aaPredicted RBP12.52□□□□□ -0.41
LINC00554-201ENST00000564841 USP9YO00507 2555 aaPredicted RBP12.52□□□□□ -0.41
LINC00554-201ENST00000564841 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 IL17RELQ6ZVW7 336 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 NRACQ8N912 160 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 TRBV7-9A0A0J9YWB2 115 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 CSMD2Q7Z408 3487 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 IGHV3OR16-13A0A075B7E8 117 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 IGHV3-74A0A0B4J1X5 117 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 IGKV3D-20A0A0C4DH25 116 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 ZNF688P0C7X2 276 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 C3orf56Q8N813 242 aa12.51□□□□□ -0.41
LINC00554-201ENST00000564841 IGHV3-66A0A0C4DH42 116 aa12.5□□□□□ -0.41
LINC00554-201ENST00000564841 F8VRH5 84 aa12.5□□□□□ -0.41
LINC00554-201ENST00000564841 SMAD5-AS1Q9Y6J3 95 aa12.5□□□□□ -0.41
LINC00554-201ENST00000564841 CELSR2Q9HCU4 2923 aa12.5□□□□□ -0.41
LINC00554-201ENST00000564841 HES1Q14469 280 aa12.5□□□□□ -0.41
LINC00554-201ENST00000564841 TMEM155Q4W5P6 130 aa12.5□□□□□ -0.41
LINC00554-201ENST00000564841 C1orf122Q6ZSJ8 110 aa12.5□□□□□ -0.41
LINC00554-201ENST00000564841 IGHV1-3A0A0C4DH29 117 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 H7C1H1 209 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 PLNP26678 52 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 PSMG4Q5JS54 123 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 UBTD1Q9HAC8 227 aa12.49□□□□□ -0.41
LINC00554-201ENST00000564841 A0A1W2PPR1 153 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms