RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TCL1AP56279 114 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 C11orf72Q8NBR9 251 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 MED9Q9NWA0 146 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 TRGV1A0A0A0MS02 117 aa11.36□□□□□ -0.59
RAB40C-208ENST00000564703 RBFOX3A6NFN3 312 aa11.36□□□□□ -0.59
RAB40C-208ENST00000564703 ATP5G1P05496 136 aa11.36□□□□□ -0.59
RAB40C-208ENST00000564703 TCTAP57738 103 aa11.36□□□□□ -0.59
RAB40C-208ENST00000564703 SPXQ9BT56 116 aa11.36□□□□□ -0.59
RAB40C-208ENST00000564703 TRGV2A0A075B6R0 118 aa11.35□□□□□ -0.59
RAB40C-208ENST00000564703 ORM1P02763 201 aa11.35□□□□□ -0.59
RAB40C-208ENST00000564703 RPL35P42766 123 aaKnown RBP11.35□□□□□ -0.59
RAB40C-208ENST00000564703 FAM162BQ5T6X4 162 aa11.35□□□□□ -0.59
RAB40C-208ENST00000564703 LYPD6BQ8NI32 183 aa11.35□□□□□ -0.59
RAB40C-208ENST00000564703 C11orf52Q96A22 123 aa11.35□□□□□ -0.59
RAB40C-208ENST00000564703 MDFICQ9P1T7 246 aa11.35□□□□□ -0.59
RAB40C-208ENST00000564703 F5H768 121 aa11.34□□□□□ -0.59
RAB40C-208ENST00000564703 LGALS9BQ3B8N2 356 aa11.34□□□□□ -0.59
RAB40C-208ENST00000564703 Q6ZTI0 123 aa11.34□□□□□ -0.59
RAB40C-208ENST00000564703 COX8CQ7Z4L0 72 aa11.34□□□□□ -0.59
RAB40C-208ENST00000564703 ZC2HC1AQ96GY0 325 aa11.34□□□□□ -0.59
RAB40C-208ENST00000564703 FAM210BQ96KR6 192 aa11.34□□□□□ -0.59
RAB40C-208ENST00000564703 EIF5A2Q9GZV4 153 aaKnown RBP11.34□□□□□ -0.59
RAB40C-208ENST00000564703 SPINK4O60575 86 aa11.33□□□□□ -0.6
RAB40C-208ENST00000564703 TYMSP04818 313 aa11.33□□□□□ -0.6
RAB40C-208ENST00000564703 S100A4P26447 101 aaKnown RBP11.33□□□□□ -0.6
RAB40C-208ENST00000564703 NHLRC2Q8NBF2 726 aa11.33□□□□□ -0.6
RAB40C-208ENST00000564703 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
RAB40C-208ENST00000564703 IGHV4-4A0A075B6R2 117 aa11.32□□□□□ -0.6
RAB40C-208ENST00000564703 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
RAB40C-208ENST00000564703 B4DEV8 164 aa11.32□□□□□ -0.6
RAB40C-208ENST00000564703 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
RAB40C-208ENST00000564703 C11orf21Q9P2W6 132 aa11.32□□□□□ -0.6
RAB40C-208ENST00000564703 SH2D1AO60880 128 aa11.31□□□□□ -0.6
RAB40C-208ENST00000564703 GNG4P50150 75 aa11.31□□□□□ -0.6
RAB40C-208ENST00000564703 CRIP1P50238 77 aa11.31□□□□□ -0.6
RAB40C-208ENST00000564703 OR5I1Q13606 314 aa11.31□□□□□ -0.6
RAB40C-208ENST00000564703 ZNF674Q2M3X9 581 aa11.31□□□□□ -0.6
RAB40C-208ENST00000564703 ZNF506Q5JVG8 444 aa11.31□□□□□ -0.6
RAB40C-208ENST00000564703 DAZAP1Q96EP5 407 aaKnown RBP11.31□□□□□ -0.6
RAB40C-208ENST00000564703 DERL1Q9BUN8 251 aa11.31□□□□□ -0.6
RAB40C-208ENST00000564703 MRPL16Q9NX20 251 aaKnown RBP11.31□□□□□ -0.6
RAB40C-208ENST00000564703 RAB19A4D1S5 217 aa11.3□□□□□ -0.6
RAB40C-208ENST00000564703 M0R036 132 aa11.3□□□□□ -0.6
RAB40C-208ENST00000564703 M0R2P5 195 aa11.3□□□□□ -0.6
RAB40C-208ENST00000564703 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
RAB40C-208ENST00000564703 ASIPP42127 132 aa11.3□□□□□ -0.6
RAB40C-208ENST00000564703 RAB14P61106 215 aa11.3□□□□□ -0.6
RAB40C-208ENST00000564703 TOR2AQ5JU69 321 aa11.3□□□□□ -0.6
RAB40C-208ENST00000564703 PRR27Q6MZM9 219 aa11.3□□□□□ -0.6
RAB40C-208ENST00000564703 MLST8Q9BVC4 326 aa11.3□□□□□ -0.6
RAB40C-208ENST00000564703 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
RAB40C-208ENST00000564703 IGKV3D-20A0A0C4DH25 116 aa11.29□□□□□ -0.6
RAB40C-208ENST00000564703 TMEM250H0YL14 139 aa11.29□□□□□ -0.6
RAB40C-208ENST00000564703 CENPWQ5EE01 88 aa11.29□□□□□ -0.6
RAB40C-208ENST00000564703 RASL10AQ92737 203 aa11.29□□□□□ -0.6
RAB40C-208ENST00000564703 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
RAB40C-208ENST00000564703 C18orf15Q96N68 181 aa11.29□□□□□ -0.6
RAB40C-208ENST00000564703 FAM210AQ96ND0 272 aa11.29□□□□□ -0.6
RAB40C-208ENST00000564703 APLNQ9ULZ1 77 aa11.29□□□□□ -0.6
RAB40C-208ENST00000564703 KRBOX1C9JBD0 128 aa11.28□□□□□ -0.6
RAB40C-208ENST00000564703 CEBPGP53567 150 aa11.28□□□□□ -0.6
RAB40C-208ENST00000564703 PCNPQ8WW12 178 aaKnown RBP11.28□□□□□ -0.6
RAB40C-208ENST00000564703 TENM2Q9NT68 2774 aa11.28□□□□□ -0.6
RAB40C-208ENST00000564703 C9JCJ5 164 aa11.27□□□□□ -0.61
RAB40C-208ENST00000564703 LY6G6CO95867 125 aa11.27□□□□□ -0.61
RAB40C-208ENST00000564703 ZNF876PQ49A33 203 aa11.27□□□□□ -0.61
RAB40C-208ENST00000564703 TMEM88Q6PEY1 159 aa11.27□□□□□ -0.61
RAB40C-208ENST00000564703 TMSB15BA0A087X1C1 80 aa11.26□□□□□ -0.61
RAB40C-208ENST00000564703 LCE6AA0A183 80 aa11.26□□□□□ -0.61
RAB40C-208ENST00000564703 GRIFINA4D1Z8 144 aa11.26□□□□□ -0.61
RAB40C-208ENST00000564703 SLAQ13239 276 aa11.26□□□□□ -0.61
RAB40C-208ENST00000564703 PEA15Q15121 130 aa11.26□□□□□ -0.61
RAB40C-208ENST00000564703 LINC01559Q495D7 138 aa11.26□□□□□ -0.61
RAB40C-208ENST00000564703 C15orf53Q8NAA6 179 aa11.26□□□□□ -0.61
RAB40C-208ENST00000564703 OR4C5Q8NGB2 326 aa11.26□□□□□ -0.61
RAB40C-208ENST00000564703 TRGV4A0A0C4DH28 118 aa11.25□□□□□ -0.61
RAB40C-208ENST00000564703 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
RAB40C-208ENST00000564703 IGHV3-53P01767 116 aa11.25□□□□□ -0.61
RAB40C-208ENST00000564703 RNASE3P12724 160 aaKnown RBP11.25□□□□□ -0.61
RAB40C-208ENST00000564703 C9orf85Q96MD7 179 aa11.25□□□□□ -0.61
RAB40C-208ENST00000564703 PARLQ9H300 379 aa11.25□□□□□ -0.61
RAB40C-208ENST00000564703 IL36BQ9NZH7 164 aa11.25□□□□□ -0.61
RAB40C-208ENST00000564703 NUDT3O95989 172 aa11.24□□□□□ -0.61
RAB40C-208ENST00000564703 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
RAB40C-208ENST00000564703 DNLZQ5SXM8 178 aa11.24□□□□□ -0.61
RAB40C-208ENST00000564703 LGALS9CQ6DKI2 356 aa11.24□□□□□ -0.61
RAB40C-208ENST00000564703 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
RAB40C-208ENST00000564703 PTH2Q96A98 100 aa11.24□□□□□ -0.61
RAB40C-208ENST00000564703 TRAV26-1A0A087WT03 109 aa11.23□□□□□ -0.61
RAB40C-208ENST00000564703 TRAV4A0A0B4J268 109 aa11.23□□□□□ -0.61
RAB40C-208ENST00000564703 A0A0J9YY99 117 aa11.23□□□□□ -0.61
RAB40C-208ENST00000564703 PGPEP1LA6NFU8 196 aa11.23□□□□□ -0.61
RAB40C-208ENST00000564703 H3BVH4 76 aa11.23□□□□□ -0.61
RAB40C-208ENST00000564703 IGLV2-8P01709 118 aa11.23□□□□□ -0.61
RAB40C-208ENST00000564703 HOXA5P20719 270 aa11.23□□□□□ -0.61
RAB40C-208ENST00000564703 RPS20P60866 119 aaKnown RBP11.23□□□□□ -0.61
RAB40C-208ENST00000564703 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
RAB40C-208ENST00000564703 NACAE9PAV3 2078 aa11.23□□□□□ -0.61
RAB40C-208ENST00000564703 MUC4Q99102 2169 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms