RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
RNF40-205ENST00000563909 NMBP08949 121 aa11.07□□□□□ -0.64
RNF40-205ENST00000563909 CRISP2P16562 243 aa11.07□□□□□ -0.64
RNF40-205ENST00000563909 Q6ZSN1 163 aa11.07□□□□□ -0.64
RNF40-205ENST00000563909 CCDC28AQ8IWP9 274 aa11.07□□□□□ -0.64
RNF40-205ENST00000563909 ZNF680Q8NEM1 530 aa11.07□□□□□ -0.64
RNF40-205ENST00000563909 FAM19A4Q96LR4 140 aa11.07□□□□□ -0.64
RNF40-205ENST00000563909 TXNDC17Q9BRA2 123 aa11.07□□□□□ -0.64
RNF40-205ENST00000563909 Q9H8V8 135 aa11.07□□□□□ -0.64
RNF40-205ENST00000563909 TRAV12-2A0A075B6T6 113 aa11.06□□□□□ -0.64
RNF40-205ENST00000563909 PEX7O00628 323 aa11.06□□□□□ -0.64
RNF40-205ENST00000563909 TAGLN2P37802 199 aaKnown RBP11.06□□□□□ -0.64
RNF40-205ENST00000563909 ATP5G3P48201 142 aa11.06□□□□□ -0.64
RNF40-205ENST00000563909 TMEM75Q8N9X5 138 aa11.06□□□□□ -0.64
RNF40-205ENST00000563909 LYPD6BQ8NI32 183 aa11.06□□□□□ -0.64
RNF40-205ENST00000563909 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
RNF40-205ENST00000563909 LOC102723971A0A1B0GUV8 181 aa11.05□□□□□ -0.64
RNF40-205ENST00000563909 GPX1P07203 203 aa11.05□□□□□ -0.64
RNF40-205ENST00000563909 TTC32Q5I0X7 151 aa11.05□□□□□ -0.64
RNF40-205ENST00000563909 C1orf158Q8N1D5 194 aa11.05□□□□□ -0.64
RNF40-205ENST00000563909 TMEM256Q8N2U0 113 aa11.05□□□□□ -0.64
RNF40-205ENST00000563909 Q8TAT8 98 aa11.05□□□□□ -0.64
RNF40-205ENST00000563909 NDFIP1Q9BT67 221 aa11.05□□□□□ -0.64
RNF40-205ENST00000563909 TMEM208Q9BTX3 173 aa11.05□□□□□ -0.64
RNF40-205ENST00000563909 PSG8Q9UQ74 426 aa11.05□□□□□ -0.64
RNF40-205ENST00000563909 TRAV8-1A0A0A6YYK1 113 aa11.04□□□□□ -0.64
RNF40-205ENST00000563909 KLLNB2CW77 178 aa11.04□□□□□ -0.64
RNF40-205ENST00000563909 J3KRW8 73 aa11.04□□□□□ -0.64
RNF40-205ENST00000563909 FLI1Q01543 452 aaPredicted RBP11.04□□□□□ -0.64
RNF40-205ENST00000563909 GFI1BQ5VTD9 330 aa11.04□□□□□ -0.64
RNF40-205ENST00000563909 C7orf71A4D174 169 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 KRTAP29-1A8MX34 341 aaPredicted RBP11.03□□□□□ -0.64
RNF40-205ENST00000563909 BCL2P10415 239 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 KRTAP10-1P60331 282 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 KIR3DS1Q14943 382 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 RRN3P1Q2M238 152 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 SGK494Q96LW2 274 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 LINC01587Q99440 93 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 VAX2Q9UIW0 290 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 PLA2G2DQ9UNK4 145 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 RNF213Q63HN8 5207 aa11.03□□□□□ -0.64
RNF40-205ENST00000563909 H7BYZ3 331 aa11.02□□□□□ -0.65
RNF40-205ENST00000563909 IGLV2-11P01706 119 aa11.02□□□□□ -0.65
RNF40-205ENST00000563909 S100A9P06702 114 aaKnown RBP11.02□□□□□ -0.65
RNF40-205ENST00000563909 RNASE4P34096 147 aaKnown RBP11.02□□□□□ -0.65
RNF40-205ENST00000563909 AKR1C3P42330 323 aa11.02□□□□□ -0.65
RNF40-205ENST00000563909 UBE2G1P62253 170 aa11.02□□□□□ -0.65
RNF40-205ENST00000563909 MEF2BQ02080 365 aaPredicted RBP11.02□□□□□ -0.65
RNF40-205ENST00000563909 SAPCD1Q5SSQ6 148 aa11.02□□□□□ -0.65
RNF40-205ENST00000563909 PRNTQ86SH4 94 aa11.02□□□□□ -0.65
RNF40-205ENST00000563909 FMC1Q96HJ9 113 aa11.02□□□□□ -0.65
RNF40-205ENST00000563909 LINC00479Q96M42 142 aa11.02□□□□□ -0.65
RNF40-205ENST00000563909 TREM1Q9NP99 234 aa11.02□□□□□ -0.65
RNF40-205ENST00000563909 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
RNF40-205ENST00000563909 TRAV34A0A0B4J273 112 aa11.01□□□□□ -0.65
RNF40-205ENST00000563909 SCO2A0A1W2PP80 73 aa11.01□□□□□ -0.65
RNF40-205ENST00000563909 F5H768 121 aa11.01□□□□□ -0.65
RNF40-205ENST00000563909 PDE6DO43924 150 aa11.01□□□□□ -0.65
RNF40-205ENST00000563909 BTN1A1Q13410 526 aa11.01□□□□□ -0.65
RNF40-205ENST00000563909 TMEM183BQ1AE95 376 aa11.01□□□□□ -0.65
RNF40-205ENST00000563909 CDPF1Q6NVV7 123 aa11.01□□□□□ -0.65
RNF40-205ENST00000563909 KLF12Q9Y4X4 402 aa11.01□□□□□ -0.65
RNF40-205ENST00000563909 TRBV6-1A0A0K0K1D8 114 aa11□□□□□ -0.65
RNF40-205ENST00000563909 RBFOX3A6NFN3 312 aa11□□□□□ -0.65
RNF40-205ENST00000563909 EREGO14944 169 aa11□□□□□ -0.65
RNF40-205ENST00000563909 ZNF324O75467 553 aaPredicted RBP11□□□□□ -0.65
RNF40-205ENST00000563909 TAS2R60P59551 318 aa11□□□□□ -0.65
RNF40-205ENST00000563909 TVP23CQ96ET8 276 aa11□□□□□ -0.65
RNF40-205ENST00000563909 ZFP30Q9Y2G7 519 aa11□□□□□ -0.65
RNF40-205ENST00000563909 RAB14P61106 215 aa10.99□□□□□ -0.65
RNF40-205ENST00000563909 HAMPP81172 84 aa10.99□□□□□ -0.65
RNF40-205ENST00000563909 SMUG1Q53HV7 270 aa10.99□□□□□ -0.65
RNF40-205ENST00000563909 PRR9Q5T870 116 aa10.99□□□□□ -0.65
RNF40-205ENST00000563909 Q6AWC8 147 aa10.99□□□□□ -0.65
RNF40-205ENST00000563909 Q86TA4 180 aa10.99□□□□□ -0.65
RNF40-205ENST00000563909 C11orf52Q96A22 123 aa10.99□□□□□ -0.65
RNF40-205ENST00000563909 PYGO2Q9BRQ0 406 aa10.99□□□□□ -0.65
RNF40-205ENST00000563909 ZNF705GA8MUZ8 300 aaPredicted RBP10.98□□□□□ -0.65
RNF40-205ENST00000563909 HTN1P15515 57 aa10.98□□□□□ -0.65
RNF40-205ENST00000563909 ZNF506Q5JVG8 444 aa10.98□□□□□ -0.65
RNF40-205ENST00000563909 TRAV21A0A0B4J279 112 aa10.97□□□□□ -0.65
RNF40-205ENST00000563909 A0A1W2PPQ1 181 aa10.97□□□□□ -0.65
RNF40-205ENST00000563909 DEFB130BP0DP73 79 aa10.97□□□□□ -0.65
RNF40-205ENST00000563909 DEFB130AP0DP74 79 aa10.97□□□□□ -0.65
RNF40-205ENST00000563909 PCNPQ8WW12 178 aaKnown RBP10.97□□□□□ -0.65
RNF40-205ENST00000563909 FAM210AQ96ND0 272 aa10.97□□□□□ -0.65
RNF40-205ENST00000563909 C8orf49Q96NF6 230 aa10.97□□□□□ -0.65
RNF40-205ENST00000563909 LINC00467Q9BRT7 94 aa10.97□□□□□ -0.65
RNF40-205ENST00000563909 EIF5A2Q9GZV4 153 aaKnown RBP10.97□□□□□ -0.65
RNF40-205ENST00000563909 MED9Q9NWA0 146 aa10.97□□□□□ -0.65
RNF40-205ENST00000563909 LYRM9A8MSI8 78 aa10.96□□□□□ -0.65
RNF40-205ENST00000563909 RGS13O14921 159 aa10.96□□□□□ -0.65
RNF40-205ENST00000563909 NDUFS6O75380 124 aaKnown RBP10.96□□□□□ -0.65
RNF40-205ENST00000563909 LTAP01374 205 aa10.96□□□□□ -0.65
RNF40-205ENST00000563909 PRM2P04554 102 aa10.96□□□□□ -0.65
RNF40-205ENST00000563909 LINC00315P59091 139 aa10.96□□□□□ -0.65
RNF40-205ENST00000563909 TOR2AQ5JU69 321 aa10.96□□□□□ -0.65
RNF40-205ENST00000563909 ZNF493Q6ZR52 646 aa10.96□□□□□ -0.65
RNF40-205ENST00000563909 EIF4E3Q8N5X7 224 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms