RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 NEGR1Q7Z3B1 354 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 ARL6IP6Q8N6S5 226 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 C5orf17Q8NAS9 161 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 INO80EQ8NBZ0 244 aaPredicted RBP12.12□□□□□ -0.47
NME3-205ENST00000563854 OR4C5Q8NGB2 326 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 RASL10AQ92737 203 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 K7EQM0 130 aa12.11□□□□□ -0.47
NME3-205ENST00000563854 M0R2P5 195 aa12.11□□□□□ -0.47
NME3-205ENST00000563854 MBP02144 154 aa12.11□□□□□ -0.47
NME3-205ENST00000563854 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
NME3-205ENST00000563854 ASB13Q8WXK3 278 aa12.11□□□□□ -0.47
NME3-205ENST00000563854 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
NME3-205ENST00000563854 SERTM2A0A1B0GWG4 89 aa12.1□□□□□ -0.47
NME3-205ENST00000563854 K7EQD1 137 aa12.1□□□□□ -0.47
NME3-205ENST00000563854 CXorf1O96002 111 aa12.1□□□□□ -0.47
NME3-205ENST00000563854 TCRAP04437 139 aa12.1□□□□□ -0.47
NME3-205ENST00000563854 RPL7L1Q6DKI1 246 aaKnown RBP12.1□□□□□ -0.47
NME3-205ENST00000563854 KCNS1Q96KK3 526 aa12.1□□□□□ -0.47
NME3-205ENST00000563854 ACTR3CQ9C0K3 210 aaPredicted RBP12.1□□□□□ -0.47
NME3-205ENST00000563854 C9JCJ5 164 aa12.09□□□□□ -0.47
NME3-205ENST00000563854 SUMO1P63165 101 aaKnown RBP12.09□□□□□ -0.47
NME3-205ENST00000563854 SERF2P84101 59 aa12.09□□□□□ -0.47
NME3-205ENST00000563854 PRNTQ86SH4 94 aa12.09□□□□□ -0.47
NME3-205ENST00000563854 TMEM167BQ9NRX6 74 aa12.09□□□□□ -0.47
NME3-205ENST00000563854 PSG8Q9UQ74 426 aa12.09□□□□□ -0.47
NME3-205ENST00000563854 BORCS7-ASMTA0A0B4J1R7 106 aa12.08□□□□□ -0.48
NME3-205ENST00000563854 LOC100131303A0A0U1RQF7 123 aa12.08□□□□□ -0.48
NME3-205ENST00000563854 RNF222A6NCQ9 220 aa12.08□□□□□ -0.48
NME3-205ENST00000563854 GGTLC3B5MD39 225 aa12.08□□□□□ -0.48
NME3-205ENST00000563854 GCGP01275 180 aa12.08□□□□□ -0.48
NME3-205ENST00000563854 ORM1P02763 201 aa12.08□□□□□ -0.48
NME3-205ENST00000563854 ZNF80P51504 273 aaPredicted RBP12.08□□□□□ -0.48
NME3-205ENST00000563854 ZFP69Q49AA0 526 aa12.08□□□□□ -0.48
NME3-205ENST00000563854 BTF3P20290 206 aaKnown RBP12.07□□□□□ -0.48
NME3-205ENST00000563854 KRTAP10-2P60368 255 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 FLI1Q01543 452 aaPredicted RBP12.07□□□□□ -0.48
NME3-205ENST00000563854 WFDC10BQ8IUB3 73 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 CYB561D1Q8N8Q1 229 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 TMEM75Q8N9X5 138 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 NHLRC2Q8NBF2 726 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 OR2T35Q8NGX2 323 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 TXNDC17Q9BRA2 123 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 TNFSF18Q9UNG2 199 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 LY96Q9Y6Y9 160 aa12.07□□□□□ -0.48
NME3-205ENST00000563854 UBE2G2P60604 165 aa12.06□□□□□ -0.48
NME3-205ENST00000563854 SUN5Q8TC36 379 aa12.06□□□□□ -0.48
NME3-205ENST00000563854 C11orf21Q9P2W6 132 aa12.06□□□□□ -0.48
NME3-205ENST00000563854 TAAR5O14804 337 aa12.05□□□□□ -0.48
NME3-205ENST00000563854 ZNF876PQ49A33 203 aa12.05□□□□□ -0.48
NME3-205ENST00000563854 SMUG1Q53HV7 270 aa12.05□□□□□ -0.48
NME3-205ENST00000563854 Q6ZRN7 208 aaPredicted RBP12.05□□□□□ -0.48
NME3-205ENST00000563854 TRAV9-2A0A087WT02 112 aa12.04□□□□□ -0.48
NME3-205ENST00000563854 IGHV3-73A0A0B4J1V6 119 aa12.04□□□□□ -0.48
NME3-205ENST00000563854 TRAV34A0A0B4J273 112 aa12.04□□□□□ -0.48
NME3-205ENST00000563854 FBLL1A6NHQ2 334 aaKnown RBP12.04□□□□□ -0.48
NME3-205ENST00000563854 CDK2AP2O75956 126 aa12.04□□□□□ -0.48
NME3-205ENST00000563854 IFNA7P01567 189 aa12.04□□□□□ -0.48
NME3-205ENST00000563854 IGLV2-11P01706 119 aa12.04□□□□□ -0.48
NME3-205ENST00000563854 PFN1P07737 140 aaKnown RBP12.04□□□□□ -0.48
NME3-205ENST00000563854 ZNF726P1Q15940 193 aa12.04□□□□□ -0.48
NME3-205ENST00000563854 MAPKAPK5-AS1Q8N8E1 139 aa12.04□□□□□ -0.48
NME3-205ENST00000563854 CTXND1A0A1B0GTU2 59 aa12.03□□□□□ -0.48
NME3-205ENST00000563854 GATA1P15976 413 aaPredicted RBP12.03□□□□□ -0.48
NME3-205ENST00000563854 EVI2AP22794 236 aa12.03□□□□□ -0.48
NME3-205ENST00000563854 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.48
NME3-205ENST00000563854 PPT1P50897 306 aa12.03□□□□□ -0.48
NME3-205ENST00000563854 FGF8P55075 233 aaPredicted RBP12.03□□□□□ -0.48
NME3-205ENST00000563854 ERVFC1-1P60608 527 aa12.03□□□□□ -0.48
NME3-205ENST00000563854 RGS21Q2M5E4 152 aa12.03□□□□□ -0.48
NME3-205ENST00000563854 AKR1C8PQ5T2L2 129 aa12.03□□□□□ -0.48
NME3-205ENST00000563854 LINC00479Q96M42 142 aa12.03□□□□□ -0.48
NME3-205ENST00000563854 KRTAP4-5Q9BYR2 181 aa12.03□□□□□ -0.48
NME3-205ENST00000563854 LRP1BQ9NZR2 4599 aa12.02□□□□□ -0.48
NME3-205ENST00000563854 HSPG2P98160 4391 aa12.02□□□□□ -0.49
NME3-205ENST00000563854 EREGO14944 169 aa12.02□□□□□ -0.49
NME3-205ENST00000563854 ABCA13Q86UQ4 5058 aa12.02□□□□□ -0.49
NME3-205ENST00000563854 A0A1W2PRE2 83 aa12.01□□□□□ -0.49
NME3-205ENST00000563854 ARPC5O15511 151 aa12.01□□□□□ -0.49
NME3-205ENST00000563854 SAPCD1Q5SSQ6 148 aa12.01□□□□□ -0.49
NME3-205ENST00000563854 CFAP126Q5VTH2 177 aa12.01□□□□□ -0.49
NME3-205ENST00000563854 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
NME3-205ENST00000563854 NFE4Q86UQ8 179 aa12.01□□□□□ -0.49
NME3-205ENST00000563854 ARL2-SNX15V9GYD0 113 aa12.01□□□□□ -0.49
NME3-205ENST00000563854 PGPEP1LA6NFU8 196 aa12□□□□□ -0.49
NME3-205ENST00000563854 PEX7O00628 323 aa12□□□□□ -0.49
NME3-205ENST00000563854 RS1O15537 224 aa12□□□□□ -0.49
NME3-205ENST00000563854 DNAH10OSP0CZ25 163 aa12□□□□□ -0.49
NME3-205ENST00000563854 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
NME3-205ENST00000563854 ZNF506Q5JVG8 444 aa12□□□□□ -0.49
NME3-205ENST00000563854 SH2D6Q7Z4S9 175 aa12□□□□□ -0.49
NME3-205ENST00000563854 SLC25A29Q8N8R3 303 aa12□□□□□ -0.49
NME3-205ENST00000563854 C9orf85Q96MD7 179 aa12□□□□□ -0.49
NME3-205ENST00000563854 PRADC1Q9BSG0 188 aa12□□□□□ -0.49
NME3-205ENST00000563854 MSRB1Q9NZV6 116 aa12□□□□□ -0.49
NME3-205ENST00000563854 SMLR1H3BR10 107 aa11.99□□□□□ -0.49
NME3-205ENST00000563854 CRYGDP07320 174 aa11.99□□□□□ -0.49
NME3-205ENST00000563854 RHOHQ15669 191 aa11.99□□□□□ -0.49
NME3-205ENST00000563854 Q86TA4 180 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms