RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 H3BTX0 84 aa6.9□□□□□ -1.3
SF3B3-204ENST00000563739 SPINK4O60575 86 aa6.9□□□□□ -1.3
SF3B3-204ENST00000563739 CRYBA4P53673 196 aa6.9□□□□□ -1.3
SF3B3-204ENST00000563739 FHL2Q14192 279 aa6.9□□□□□ -1.3
SF3B3-204ENST00000563739 FFAR4Q5NUL3 377 aa6.9□□□□□ -1.3
SF3B3-204ENST00000563739 BPIFA4PQ86YQ2 179 aa6.9□□□□□ -1.3
SF3B3-204ENST00000563739 MRPL32Q9BYC8 188 aaKnown RBP6.9□□□□□ -1.3
SF3B3-204ENST00000563739 ICOSQ9Y6W8 199 aa6.9□□□□□ -1.3
SF3B3-204ENST00000563739 TRAV5A0A0B4J249 113 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 TRAV12-3A0A0B4J271 114 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 SNURFLB1AK76 121 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 NPIPB6E9PJ23 425 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 J3KRW8 73 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 IGLC2P0DOY2 106 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 PRR9Q5T870 116 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 LCN15Q6UWW0 184 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 DPPA3Q6W0C5 159 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 Q8N814 137 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 DEFB104AQ8WTQ1 72 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 NTN5Q8WTR8 489 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-204ENST00000563739 FAM19A4Q96LR4 140 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 PSMG3Q9BT73 122 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-204ENST00000563739 FUT9Q9Y231 359 aa6.89□□□□□ -1.31
SF3B3-204ENST00000563739 PAX4O43316 350 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 IGHV3-53P01767 116 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-204ENST00000563739 HNRNPA3P51991 378 aaKnown RBP6.88□□□□□ -1.31
SF3B3-204ENST00000563739 TCL1AP56279 114 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 AKR1C8PQ5T2L2 129 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 MIR17HGQ75NE6 70 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 CCDC28AQ8IWP9 274 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 FAM213BQ8TBF2 198 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 FAM167A-AS1Q96KT0 104 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 ODF3Q96PU9 254 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 SLC25A2Q9BXI2 301 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 MRPL16Q9NX20 251 aaKnown RBP6.88□□□□□ -1.31
SF3B3-204ENST00000563739 TMEM14CQ9P0S9 112 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 TP53TG3Q9ULZ0 132 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 LY96Q9Y6Y9 160 aa6.88□□□□□ -1.31
SF3B3-204ENST00000563739 TRGV1A0A0A0MS02 117 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 TMEM218A2RU14 115 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 KLLNB2CW77 178 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 H3BQ15 152 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 MT1HL1P0DM35 61 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 PYYP10082 97 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 FHITP49789 147 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 RAB2AP61019 212 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 SERF2P84101 59 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 BTN1A1Q13410 526 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 ACOT6Q3I5F7 207 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-204ENST00000563739 SYT8Q8NBV8 401 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 C8orf49Q96NF6 230 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 VGLL1Q99990 258 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 SLC50A1Q9BRV3 221 aa6.87□□□□□ -1.31
SF3B3-204ENST00000563739 TRGV2A0A075B6R0 118 aa6.86□□□□□ -1.31
SF3B3-204ENST00000563739 K7EQD1 137 aa6.86□□□□□ -1.31
SF3B3-204ENST00000563739 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
SF3B3-204ENST00000563739 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
SF3B3-204ENST00000563739 GUK1Q16774 197 aa6.86□□□□□ -1.31
SF3B3-204ENST00000563739 ANXA2RQ3ZCQ2 193 aa6.86□□□□□ -1.31
SF3B3-204ENST00000563739 KHDC3LQ587J8 217 aa6.86□□□□□ -1.31
SF3B3-204ENST00000563739 SCXQ7RTU7 201 aa6.86□□□□□ -1.31
SF3B3-204ENST00000563739 TREM1Q9NP99 234 aa6.86□□□□□ -1.31
SF3B3-204ENST00000563739 PPP1R14DQ9NXH3 145 aa6.86□□□□□ -1.31
SF3B3-204ENST00000563739 PRO0255Q9UI72 69 aa6.86□□□□□ -1.31
SF3B3-204ENST00000563739 TRBV19A0A075B6N1 114 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 TRAV1-1A0A0B4J248 108 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 C7orf71A4D174 169 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 OR7C2O60412 319 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 ZNF253O75346 499 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 EIF3GO75821 320 aaKnown RBP eCLIP6.85□□□□□ -1.31
SF3B3-204ENST00000563739 OXTP01178 125 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 MBP02144 154 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 H2AFB1P0C5Y9 115 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 HIST1H1EP10412 219 aaKnown RBP6.85□□□□□ -1.31
SF3B3-204ENST00000563739 TAS2R45P59539 299 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 UBE2L3P68036 154 aaKnown RBP6.85□□□□□ -1.31
SF3B3-204ENST00000563739 PDE6HQ13956 83 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 PEA15Q15121 130 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 C10orf91Q5T1B1 145 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 FAM122CQ6P4D5 195 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 OR10G4Q8NGN3 311 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 OR10G9Q8NGN4 311 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 OR10G7Q8NGN6 311 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 FXYD5Q96DB9 178 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 PAXXQ9BUH6 204 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 MUC2Q02817 5179 aa6.85□□□□□ -1.31
SF3B3-204ENST00000563739 LOC100131303A0A0U1RQF7 123 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 M0R3E3 92 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 NDUFB4O95168 129 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 CRYGDP07320 174 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 OR10J4P0C629 311 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 SFTA3P0C7M3 94 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 CDC34P49427 236 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-204ENST00000563739 ERCC8Q13216 396 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 LINC01620Q4KN68 170 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 NEGR1Q7Z3B1 354 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 ZFAND2AQ8N6M9 145 aa6.84□□□□□ -1.31
SF3B3-204ENST00000563739 BLNKQ8WV28 456 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms