RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 C8orf49Q96NF6 230 aa12.59□□□□□ -0.39
SPSB3-202ENST00000563668 EDA2RQ9HAV5 297 aa12.59□□□□□ -0.39
SPSB3-202ENST00000563668 RAB4BP61018 213 aa12.58□□□□□ -0.4
SPSB3-202ENST00000563668 Q0VG73 95 aa12.58□□□□□ -0.4
SPSB3-202ENST00000563668 SAPCD1Q5SSQ6 148 aa12.58□□□□□ -0.4
SPSB3-202ENST00000563668 GDF5OSQ5U4N7 250 aa12.58□□□□□ -0.4
SPSB3-202ENST00000563668 MRPL53Q96EL3 112 aaKnown RBP12.58□□□□□ -0.4
SPSB3-202ENST00000563668 PACRGQ96M98 296 aaPredicted RBP12.58□□□□□ -0.4
SPSB3-202ENST00000563668 TP53TG3Q9ULZ0 132 aa12.58□□□□□ -0.4
SPSB3-202ENST00000563668 TRAV8-2A0A0B4J237 113 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 GRIFINA4D1Z8 144 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 RBAKDNA6NC62 111 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 ZNF705FA8MVS1 300 aaPredicted RBP12.57□□□□□ -0.4
SPSB3-202ENST00000563668 FOXA3P55318 350 aaPredicted RBP12.57□□□□□ -0.4
SPSB3-202ENST00000563668 PYY3Q5JQD4 70 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 APRG1Q8IVJ8 170 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 TMEM256Q8N2U0 113 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 VGLL1Q99990 258 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 RYR3Q15413 4870 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 APCSP02743 223 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 CT45A10P0DMU9 189 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 WFDC3Q8IUB2 231 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 MUC7Q8TAX7 377 aa12.57□□□□□ -0.4
SPSB3-202ENST00000563668 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
SPSB3-202ENST00000563668 LOC102724200A0A096LPH7 203 aaPredicted RBP12.56□□□□□ -0.4
SPSB3-202ENST00000563668 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
SPSB3-202ENST00000563668 PRAC2D3DTV9 90 aa12.56□□□□□ -0.4
SPSB3-202ENST00000563668 ESDP10768 282 aa12.56□□□□□ -0.4
SPSB3-202ENST00000563668 RNF182Q8N6D2 247 aa12.56□□□□□ -0.4
SPSB3-202ENST00000563668 PGLYRP4Q96LB8 373 aa12.56□□□□□ -0.4
SPSB3-202ENST00000563668 CLEC5AQ9NY25 188 aa12.56□□□□□ -0.4
SPSB3-202ENST00000563668 CSMD3Q7Z407 3707 aa12.56□□□□□ -0.4
SPSB3-202ENST00000563668 NUPR1O60356 82 aa12.55□□□□□ -0.4
SPSB3-202ENST00000563668 GZMBP10144 247 aa12.55□□□□□ -0.4
SPSB3-202ENST00000563668 LINC00310P59036 64 aa12.55□□□□□ -0.4
SPSB3-202ENST00000563668 HBBP68871 147 aa12.55□□□□□ -0.4
SPSB3-202ENST00000563668 SLAQ13239 276 aa12.55□□□□□ -0.4
SPSB3-202ENST00000563668 KIAA1644Q3SXP7 199 aa12.55□□□□□ -0.4
SPSB3-202ENST00000563668 TMEM18Q96B42 140 aa12.55□□□□□ -0.4
SPSB3-202ENST00000563668 MS4A6AQ9H2W1 248 aa12.55□□□□□ -0.4
SPSB3-202ENST00000563668 NIT2Q9NQR4 276 aa12.55□□□□□ -0.4
SPSB3-202ENST00000563668 SH2D1AO60880 128 aa12.54□□□□□ -0.4
SPSB3-202ENST00000563668 OR10J3Q5JRS4 329 aa12.54□□□□□ -0.4
SPSB3-202ENST00000563668 DNLZQ5SXM8 178 aa12.54□□□□□ -0.4
SPSB3-202ENST00000563668 FAM162BQ5T6X4 162 aa12.54□□□□□ -0.4
SPSB3-202ENST00000563668 Q8TAT8 98 aa12.54□□□□□ -0.4
SPSB3-202ENST00000563668 A0A1W2PS18 150 aa12.53□□□□□ -0.4
SPSB3-202ENST00000563668 RPL35AP18077 110 aaKnown RBP12.53□□□□□ -0.4
SPSB3-202ENST00000563668 CAMPP49913 170 aa12.53□□□□□ -0.4
SPSB3-202ENST00000563668 MAP6D1Q9H9H5 199 aa12.53□□□□□ -0.4
SPSB3-202ENST00000563668 C3orf84H3BNL1 204 aa12.52□□□□□ -0.4
SPSB3-202ENST00000563668 SERF1AO75920 110 aa12.52□□□□□ -0.4
SPSB3-202ENST00000563668 SRIP30626 198 aa12.52□□□□□ -0.4
SPSB3-202ENST00000563668 RPL11P62913 178 aaKnown RBP12.52□□□□□ -0.4
SPSB3-202ENST00000563668 ERCC8Q13216 396 aa12.52□□□□□ -0.4
SPSB3-202ENST00000563668 CASC10Q5T4H9 136 aa12.52□□□□□ -0.4
SPSB3-202ENST00000563668 OVOL2Q9BRP0 275 aa12.52□□□□□ -0.4
SPSB3-202ENST00000563668 NDFIP1Q9BT67 221 aa12.52□□□□□ -0.4
SPSB3-202ENST00000563668 F2Z2F3 143 aa12.52□□□□□ -0.41
SPSB3-202ENST00000563668 Q6AWC8 147 aa12.52□□□□□ -0.41
SPSB3-202ENST00000563668 ZFAND6Q6FIF0 208 aa12.52□□□□□ -0.41
SPSB3-202ENST00000563668 BAGE3Q86Y29 109 aa12.52□□□□□ -0.41
SPSB3-202ENST00000563668 SACSQ9NZJ4 4579 aa12.51□□□□□ -0.41
SPSB3-202ENST00000563668 TMEM189A5PLL7 270 aa12.51□□□□□ -0.41
SPSB3-202ENST00000563668 PCP4L1A6NKN8 68 aa12.51□□□□□ -0.41
SPSB3-202ENST00000563668 SOCS3O14543 225 aa12.51□□□□□ -0.41
SPSB3-202ENST00000563668 BMI1P35226 326 aa12.51□□□□□ -0.41
SPSB3-202ENST00000563668 ZNF80P51504 273 aaPredicted RBP12.51□□□□□ -0.41
SPSB3-202ENST00000563668 C16orf92Q96LL3 132 aa12.51□□□□□ -0.41
SPSB3-202ENST00000563668 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
SPSB3-202ENST00000563668 AGPAT4-IT1Q9H0P7 198 aa12.51□□□□□ -0.41
SPSB3-202ENST00000563668 DYNC2H1Q8NCM8 4307 aaKnown RBP12.5□□□□□ -0.41
SPSB3-202ENST00000563668 A0A1B0GUT8 65 aa12.5□□□□□ -0.41
SPSB3-202ENST00000563668 S100A12P80511 92 aa12.5□□□□□ -0.41
SPSB3-202ENST00000563668 JOSD1Q15040 202 aaPredicted RBP12.5□□□□□ -0.41
SPSB3-202ENST00000563668 C9orf47Q6ZRZ4 202 aa12.5□□□□□ -0.41
SPSB3-202ENST00000563668 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
SPSB3-202ENST00000563668 PPP1R14DQ9NXH3 145 aa12.5□□□□□ -0.41
SPSB3-202ENST00000563668 A0A1B0GW15 77 aa12.49□□□□□ -0.41
SPSB3-202ENST00000563668 ZNF138P52744 262 aa12.49□□□□□ -0.41
SPSB3-202ENST00000563668 DEFB131AP59861 70 aa12.49□□□□□ -0.41
SPSB3-202ENST00000563668 RPS20P60866 119 aaKnown RBP12.49□□□□□ -0.41
SPSB3-202ENST00000563668 PAFAH1B2P68402 229 aa12.49□□□□□ -0.41
SPSB3-202ENST00000563668 CDPF1Q6NVV7 123 aa12.49□□□□□ -0.41
SPSB3-202ENST00000563668 C20orf173Q96LM9 149 aa12.49□□□□□ -0.41
SPSB3-202ENST00000563668 ALKBH7Q9BT30 221 aaPredicted RBP12.49□□□□□ -0.41
SPSB3-202ENST00000563668 K7EQG2 157 aa12.48□□□□□ -0.41
SPSB3-202ENST00000563668 ARMS2P0C7Q2 107 aa12.48□□□□□ -0.41
SPSB3-202ENST00000563668 RIGQ13278 110 aa12.48□□□□□ -0.41
SPSB3-202ENST00000563668 DEFB135Q30KP9 77 aa12.48□□□□□ -0.41
SPSB3-202ENST00000563668 C18orf32Q8TCD1 76 aa12.48□□□□□ -0.41
SPSB3-202ENST00000563668 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
SPSB3-202ENST00000563668 FABP5P3A8MUU1 101 aa12.47□□□□□ -0.41
SPSB3-202ENST00000563668 TMEM78Q5T7P6 136 aa12.47□□□□□ -0.41
SPSB3-202ENST00000563668 NRN1Q9NPD7 142 aa12.47□□□□□ -0.41
SPSB3-202ENST00000563668 GSN-AS1Q9NRJ2 163 aa12.47□□□□□ -0.41
SPSB3-202ENST00000563668 TRAV2A0A0B4J234 112 aa12.47□□□□□ -0.41
SPSB3-202ENST00000563668 APOC4P55056 127 aa12.47□□□□□ -0.41
SPSB3-202ENST00000563668 TMSB15BA0A087X1C1 80 aa12.46□□□□□ -0.42
SPSB3-202ENST00000563668 KIR2DL5BA0A0G2JN68 375 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms