RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 RTL8CO15255 209 aa10.28□□□□□ -0.76
RPUSD1-204ENST00000563560 CMTM2Q8TAZ6 248 aa10.28□□□□□ -0.76
RPUSD1-204ENST00000563560 PCNPQ8WW12 178 aaKnown RBP10.28□□□□□ -0.76
RPUSD1-204ENST00000563560 EPDR1Q9UM22 224 aa10.28□□□□□ -0.76
RPUSD1-204ENST00000563560 TRAV26-1A0A087WT03 109 aa10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 FAM3BP58499 235 aaPredicted RBP10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 SUMO1P63165 101 aaKnown RBP10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 MUC21Q5SSG8 566 aa10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 UQCC3Q6UW78 93 aa10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 ZNRF2Q8NHG8 242 aa10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 FAM213BQ8TBF2 198 aa10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 SGK494Q96LW2 274 aa10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 RPH3ALQ9UNE2 315 aa10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 LINC00588Q9Y4M8 146 aa10.27□□□□□ -0.77
RPUSD1-204ENST00000563560 KIAA1109Q2LD37 5005 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 TRGV1A0A0A0MS02 117 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 A0A1B0GVY2 172 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 FAM74A7A6NL05 159 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 F6UZH7 168 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 H2AFB1P0C5Y9 115 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 FHITP49789 147 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 TMEM75Q8N9X5 138 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 C8orf49Q96NF6 230 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 MRPL16Q9NX20 251 aaKnown RBP10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 PSG8Q9UQ74 426 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 DNAH5Q8TE73 4624 aa10.26□□□□□ -0.77
RPUSD1-204ENST00000563560 TRAV1-1A0A0B4J248 108 aa10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 IGHV3-16A0A0C4DH30 117 aa10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 TYMSP04818 313 aa10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 FGF8P55075 233 aaPredicted RBP10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 CYB561D1Q8N8Q1 229 aa10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 RASL10AQ92737 203 aa10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 LINC00479Q96M42 142 aa10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 ATG101Q9BSB4 218 aa10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 TREM1Q9NP99 234 aa10.25□□□□□ -0.77
RPUSD1-204ENST00000563560 GNRH2O43555 120 aa10.24□□□□□ -0.77
RPUSD1-204ENST00000563560 FHL2Q14192 279 aa10.24□□□□□ -0.77
RPUSD1-204ENST00000563560 TMEM183BQ1AE95 376 aa10.24□□□□□ -0.77
RPUSD1-204ENST00000563560 COX8CQ7Z4L0 72 aa10.24□□□□□ -0.77
RPUSD1-204ENST00000563560 ZNF575Q86XF7 245 aa10.24□□□□□ -0.77
RPUSD1-204ENST00000563560 TMEM183AQ8IXX5 376 aa10.24□□□□□ -0.77
RPUSD1-204ENST00000563560 MBD3L1Q8WWY6 194 aa10.24□□□□□ -0.77
RPUSD1-204ENST00000563560 A0A096LPF7 62 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 TRAV21A0A0B4J279 112 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 A0A0J9YY99 117 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 MAP1LC3B2A6NCE7 125 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 M0R2N4 97 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 NUDT3O95989 172 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 FLI1Q01543 452 aaPredicted RBP10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 OR5I1Q13606 314 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 ESRGQ1W209 222 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 SPXQ9BT56 116 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 MAP1LC3BQ9GZQ8 125 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 SMDT1Q9H4I9 107 aa10.23□□□□□ -0.77
RPUSD1-204ENST00000563560 LRP1BQ9NZR2 4599 aa10.22□□□□□ -0.77
RPUSD1-204ENST00000563560 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
RPUSD1-204ENST00000563560 TRGV11A0A075B6L2 103 aa10.22□□□□□ -0.77
RPUSD1-204ENST00000563560 TRGV2A0A075B6R0 118 aa10.22□□□□□ -0.77
RPUSD1-204ENST00000563560 FAM159AQ6UWV7 190 aa10.22□□□□□ -0.77
RPUSD1-204ENST00000563560 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
RPUSD1-204ENST00000563560 IQCF2Q8IXL9 164 aa10.22□□□□□ -0.77
RPUSD1-204ENST00000563560 SFT2D1Q8WV19 159 aa10.22□□□□□ -0.77
RPUSD1-204ENST00000563560 UPK3BQ9BT76 320 aa10.22□□□□□ -0.77
RPUSD1-204ENST00000563560 TRAV34A0A0B4J273 112 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 FBLL1A6NHQ2 334 aaKnown RBP10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 KRBOX1C9JBD0 128 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 IFNA1P01562 189 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 PFN1P07737 140 aaKnown RBP10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 TAGLN2P37802 199 aaKnown RBP10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 PPT1P50897 306 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 UBE2G2P60604 165 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 Q86TA4 180 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 ZNF479Q96JC4 524 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 C9orf85Q96MD7 179 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 FAM210AQ96ND0 272 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 KRTAP1-5Q9BYS1 174 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 ARL2-SNX15V9GYD0 113 aa10.21□□□□□ -0.77
RPUSD1-204ENST00000563560 PEX7O00628 323 aa10.2□□□□□ -0.78
RPUSD1-204ENST00000563560 GCGP01275 180 aa10.2□□□□□ -0.78
RPUSD1-204ENST00000563560 IGHV3-53P01767 116 aa10.2□□□□□ -0.78
RPUSD1-204ENST00000563560 CRIP1P50238 77 aa10.2□□□□□ -0.78
RPUSD1-204ENST00000563560 CRYBA4P53673 196 aa10.2□□□□□ -0.78
RPUSD1-204ENST00000563560 PEA15Q15121 130 aa10.2□□□□□ -0.78
RPUSD1-204ENST00000563560 LINC00336Q6ZUF6 198 aa10.2□□□□□ -0.78
RPUSD1-204ENST00000563560 PRNTQ86SH4 94 aa10.2□□□□□ -0.78
RPUSD1-204ENST00000563560 NKX6-2Q9C056 277 aaPredicted RBP10.2□□□□□ -0.78
RPUSD1-204ENST00000563560 IGKV3D-20A0A0C4DH25 116 aa10.19□□□□□ -0.78
RPUSD1-204ENST00000563560 TRBV6-1A0A0K0K1D8 114 aa10.19□□□□□ -0.78
RPUSD1-204ENST00000563560 RNASE3P12724 160 aaKnown RBP10.19□□□□□ -0.78
RPUSD1-204ENST00000563560 SMUG1Q53HV7 270 aa10.19□□□□□ -0.78
RPUSD1-204ENST00000563560 HIST1H2BAQ96A08 127 aa10.19□□□□□ -0.78
RPUSD1-204ENST00000563560 KCNS1Q96KK3 526 aa10.19□□□□□ -0.78
RPUSD1-204ENST00000563560 NAGKQ9UJ70 344 aa10.19□□□□□ -0.78
RPUSD1-204ENST00000563560 NBDYA0A0U1RRE5 68 aa10.18□□□□□ -0.78
RPUSD1-204ENST00000563560 K7EQM0 130 aa10.18□□□□□ -0.78
RPUSD1-204ENST00000563560 M0R2P5 195 aa10.18□□□□□ -0.78
RPUSD1-204ENST00000563560 NDUFS6O75380 124 aaKnown RBP10.18□□□□□ -0.78
RPUSD1-204ENST00000563560 SFTA3P0C7M3 94 aa10.18□□□□□ -0.78
RPUSD1-204ENST00000563560 CCL18P55774 89 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms