RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 COL16A1Q07092 1604 aaPredicted RBP3.31□□□□□ -1.88
CHD9-206ENST00000562791 TRBV20OR9-2A0A075B6H5 130 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 IGLV4-3A0A075B6K6 122 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 TRBV10-2A0A0K0K1G8 114 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 A0A1B0GXF2 115 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 WI2-2373I1.2A0A1W2PRP0 233 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 IL9P15248 144 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 SLC25A16P16260 332 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 SYNJ2BPP57105 145 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 PCBD1P61457 104 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 SNRPD3P62318 126 aaKnown RBP3.31□□□□□ -1.88
CHD9-206ENST00000562791 ZNF816Q0VGE8 651 aaPredicted RBP3.31□□□□□ -1.88
CHD9-206ENST00000562791 ECSCRQ19T08 205 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 LINC00173Q6ZV60 143 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 WDR86Q86TI4 376 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 RPRMLQ8N4K4 120 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 RPP25LQ8N5L8 163 aaKnown RBP3.31□□□□□ -1.88
CHD9-206ENST00000562791 DYNLRB1Q9NP97 96 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 DEPPQ9NTK1 212 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 ZNF492Q9P255 531 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 ANAPC1Q9H1A4 1944 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 THSD7AQ9UPZ6 1657 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 IGHV3-20A0A0C4DH32 117 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 IGHV3-38A0A0C4DH36 116 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 TRBV27A0A0K0K1C4 114 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 LOC730098B7Z3J9 87 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 ZNF823P16415 610 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 LMO2P25791 158 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 RPL34P49207 117 aaKnown RBP3.3□□□□□ -1.88
CHD9-206ENST00000562791 LAGE3Q14657 143 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 TMEM155Q4W5P6 130 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 SLC48A1Q6P1K1 146 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 COX8CQ7Z4L0 72 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 LYZL2Q7Z4W2 148 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 NDUFA11Q86Y39 141 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 CYSTM1Q9H1C7 97 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 CXXC4Q9H2H0 198 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 NUP214P35658 2090 aaPredicted RBP3.3□□□□□ -1.88
CHD9-206ENST00000562791 LCTP09848 1927 aa3.3□□□□□ -1.88
CHD9-206ENST00000562791 TRPM6Q9BX84 2022 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 PTPRDP23468 1912 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 A0A087WZ39 114 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 TMEM14DPA8MWL7 114 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 J3QT63 122 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 NDUFC1O43677 76 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 HBBP68871 147 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 ATXN8Q156A1 80 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 UNQ9165/PRO28630Q6UXU0 137 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 Q8N2B8 174 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 OR8A1Q8NGG7 326 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 DCANP1Q8TF63 244 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 Q96M85 177 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 METTL26Q96S19 204 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 TMEM243Q9BU79 118 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 C11orf68Q9H3H3 251 aaKnown RBP3.29□□□□□ -1.88
CHD9-206ENST00000562791 TMEM14AQ9Y6G1 99 aa3.29□□□□□ -1.88
CHD9-206ENST00000562791 A0A0B4J2C4 111 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 A0A1B0GWA3 101 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 LINC01549A6NIU2 74 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 IBA57-AS1B1ANH7 110 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 H3BVH4 76 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 PEX7O00628 323 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 UBE2L6O14933 153 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 TIMM17BO60830 172 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 IGKV1D-33P01593 117 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 IGKV1-33P01594 117 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 NCBP2P52298 156 aaKnown RBP eCLIP3.28□□□□□ -1.88
CHD9-206ENST00000562791 ABCA11PQ4W5N1 156 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 CENPWQ5EE01 88 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 PHF5AQ7RTV0 110 aaKnown RBP3.28□□□□□ -1.88
CHD9-206ENST00000562791 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 Q8N8P6 123 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 KLHL30-AS1Q8NEE0 82 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 VSIG2Q96IQ7 327 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 HIST1H4GQ99525 98 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 TAS2R4Q9NYW5 299 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 LTBP4Q8N2S1 1624 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 GREB1Q4ZG55 1949 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 PLXNB3Q9ULL4 1909 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 PLXNB2O15031 1838 aa3.28□□□□□ -1.88
CHD9-206ENST00000562791 NCOA6Q14686 2063 aaPredicted RBP3.28□□□□□ -1.89
CHD9-206ENST00000562791 SSC5DA1L4H1 1573 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 IGLV3-22A0A075B6J6 115 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 TMSB15BA0A087X1C1 80 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 TRAV41A0A0B4J266 112 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 M0R378 163 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 HMGN4O00479 90 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 LTAP01374 205 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 CCKP06307 115 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 MFAP2P55001 183 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 ATP1A1-AS1Q5TC04 95 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 MIC13Q5XKP0 118 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 REG3GQ6UW15 175 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 Q6ZVQ6 151 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 VN1R4Q7Z5H5 301 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 C6orf223Q8N319 242 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 CD177Q8N6Q3 437 aa3.27□□□□□ -1.89
CHD9-206ENST00000562791 TMEM75Q8N9X5 138 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms