RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CENPVL3A0A0U1RRI6 287 aa10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 TNFRSF6BO95407 300 aa10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 RAB9BQ9NP90 201 aa10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 CFAP46Q8IYW2 2715 aa10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 IGHV3-72A0A0B4J1Y9 119 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 M0R3E3 92 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 GATA1P15976 413 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 LOXP28300 417 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 TRAV8-2A0A0B4J237 113 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 LINC01546A6NGU7 62 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 LINC01619G3V211 115 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 SH2D1AO60880 128 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 APELAP0DMC3 54 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 PPP1R27Q86WC6 154 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 RNF185Q96GF1 192 aa10.9□□□□□ -0.66
GTF3C1-203ENST00000562609 MYOZ3Q8TDC0 251 aa10.9□□□□□ -0.67
GTF3C1-203ENST00000562609 LINC00574Q9H8X3 128 aa10.9□□□□□ -0.67
GTF3C1-203ENST00000562609 VPREB3Q9UKI3 123 aa10.9□□□□□ -0.67
GTF3C1-203ENST00000562609 A0A1W2PPI3 338 aa10.89□□□□□ -0.67
GTF3C1-203ENST00000562609 UCNP55089 124 aa10.89□□□□□ -0.67
GTF3C1-203ENST00000562609 LYRM7Q5U5X0 104 aa10.89□□□□□ -0.67
GTF3C1-203ENST00000562609 PPDPFQ9H3Y8 114 aa10.89□□□□□ -0.67
GTF3C1-203ENST00000562609 LGALS1P09382 135 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-203ENST00000562609 MEIG1Q5JSS6 88 aa10.89□□□□□ -0.67
GTF3C1-203ENST00000562609 SBSPONQ8IVN8 264 aa10.89□□□□□ -0.67
GTF3C1-203ENST00000562609 TMEM14CQ9P0S9 112 aa10.89□□□□□ -0.67
GTF3C1-203ENST00000562609 CELSR1Q9NYQ6 3014 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 ZFHX3Q15911 3703 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 TRBV19A0A075B6N1 114 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 B9A039 149 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 UBE2D1P51668 147 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 Q6ZQT7 251 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 TMEM167AQ8TBQ9 72 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 PLNP26678 52 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 SRSF9Q13242 221 aaKnown RBP eCLIP10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 SIGLEC15Q6ZMC9 328 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 RASL11BQ9BPW5 248 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 ACACBO00763 2458 aa10.88□□□□□ -0.67
GTF3C1-203ENST00000562609 SPG11Q96JI7 2443 aa10.87□□□□□ -0.67
GTF3C1-203ENST00000562609 TMEM78Q5T7P6 136 aa10.87□□□□□ -0.67
GTF3C1-203ENST00000562609 FLNCQ14315 2725 aa10.87□□□□□ -0.67
GTF3C1-203ENST00000562609 ZNF833PQ6ZTB9 187 aa10.87□□□□□ -0.67
GTF3C1-203ENST00000562609 IGFBPL1Q8WX77 278 aa10.87□□□□□ -0.67
GTF3C1-203ENST00000562609 CACNA1BQ00975 2339 aa10.87□□□□□ -0.67
GTF3C1-203ENST00000562609 J3KRW8 73 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 M0QXV9 152 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 EGR2P11161 476 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 ASIPP42127 132 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 AAMDCQ9H7C9 122 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 ZFYVE26Q68DK2 2539 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 SCGB1D4Q6XE38 83 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 OR11H6Q8NGC7 330 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 TPSG1Q9NRR2 321 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 CRYBG3Q68DQ2 2970 aa10.86□□□□□ -0.67
GTF3C1-203ENST00000562609 ENSAO43768 121 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 SCGB1C2P0DMR2 95 aa10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 EFNA4P52798 201 aa10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 Q8N8P6 123 aa10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 IGHV1-8P0DP01 117 aa10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 UTP20O75691 2785 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 COX7A1P24310 79 aa10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 ATP5J2P56134 94 aa10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 ZNF672Q499Z4 452 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 TMEM155Q4W5P6 130 aa10.85□□□□□ -0.67
GTF3C1-203ENST00000562609 DLX6P56179 175 aa10.84□□□□□ -0.67
GTF3C1-203ENST00000562609 OR4C13Q8NGP0 309 aa10.84□□□□□ -0.67
GTF3C1-203ENST00000562609 CACNA1AO00555 2505 aa10.84□□□□□ -0.67
GTF3C1-203ENST00000562609 ZNF815PA8K554 130 aa10.84□□□□□ -0.67
GTF3C1-203ENST00000562609 SLC25A20O43772 301 aa10.84□□□□□ -0.67
GTF3C1-203ENST00000562609 CD7P09564 240 aa10.84□□□□□ -0.67
GTF3C1-203ENST00000562609 NDUFA11Q86Y39 141 aa10.84□□□□□ -0.67
GTF3C1-203ENST00000562609 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
GTF3C1-203ENST00000562609 F8VRH5 84 aa10.83□□□□□ -0.68
GTF3C1-203ENST00000562609 H7C1H1 209 aa10.83□□□□□ -0.68
GTF3C1-203ENST00000562609 Q6Q795 121 aa10.83□□□□□ -0.68
GTF3C1-203ENST00000562609 KAAG1Q9UBP8 84 aa10.83□□□□□ -0.68
GTF3C1-203ENST00000562609 IGLV2-18A0A075B6J9 118 aa10.83□□□□□ -0.68
GTF3C1-203ENST00000562609 C9JAW5 83 aa10.83□□□□□ -0.68
GTF3C1-203ENST00000562609 IGLC6P0CF74 106 aa10.83□□□□□ -0.68
GTF3C1-203ENST00000562609 CNTFRP26992 372 aa10.83□□□□□ -0.68
GTF3C1-203ENST00000562609 LAGE3Q14657 143 aa10.83□□□□□ -0.68
GTF3C1-203ENST00000562609 FBXL19-AS1Q494R0 122 aa10.82□□□□□ -0.68
GTF3C1-203ENST00000562609 RASL10AQ92737 203 aa10.82□□□□□ -0.68
GTF3C1-203ENST00000562609 PRADC1Q9BSG0 188 aa10.82□□□□□ -0.68
GTF3C1-203ENST00000562609 ONECUT1Q9UBC0 465 aa10.82□□□□□ -0.68
GTF3C1-203ENST00000562609 IGSF10Q6WRI0 2623 aa10.82□□□□□ -0.68
GTF3C1-203ENST00000562609 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
GTF3C1-203ENST00000562609 CSMD2Q7Z408 3487 aa10.82□□□□□ -0.68
GTF3C1-203ENST00000562609 RAB1BQ9H0U4 201 aa10.82□□□□□ -0.68
GTF3C1-203ENST00000562609 A0A1W2PPR1 153 aa10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 ZNF80P51504 273 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 LYPD1Q8N2G4 141 aa10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 C15orf53Q8NAA6 179 aa10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 SPANXA1Q9NS26 97 aa10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 IGKV2-40A0A087WW87 121 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 IGKV2D-40P01614 121 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 ORM1P02763 201 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 271.4 ms