RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MBD2Q9UBB5 411 aa11.24□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 TRAV8-1A0A0A6YYK1 113 aa11.23□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 PGPA6NDG6 321 aa11.23□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 F6UZH7 168 aa11.23□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 MPC2O95563 127 aa11.23□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 GOLT1AQ6ZVE7 132 aa11.23□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 TRAV21A0A0B4J279 112 aa11.22□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 INMT-MINDY4F8WBC2 141 aa11.22□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 GATA1P15976 413 aaPredicted RBP11.22□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 GCSHP23434 173 aa11.22□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 RPL12P30050 165 aaKnown RBP11.22□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 C10orf126Q8N4M7 172 aa11.22□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 CMTM2Q8TAZ6 248 aa11.22□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 SCGB1C1Q8TD33 95 aa11.22□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 FRZBQ92765 325 aa11.22□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 LRCOL1A6NCL2 159 aa11.21□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 SMR3BP02814 79 aaPredicted RBP11.21□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 GNG5P63218 68 aa11.21□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 WFDC1Q9HC57 220 aa11.21□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
VPS9D1-AS1-201ENST00000562298 IGHV3-38A0A0C4DH36 116 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 PET100P0DJ07 73 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 TIRAPP58753 221 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 HAMPP81172 84 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 FAM74A1Q5RGS3 127 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 PQLC2Q6ZP29 291 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 SH2D6Q7Z4S9 175 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 NHLRC2Q8NBF2 726 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 MARVELD1Q9BSK0 173 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 SDF2L1Q9HCN8 221 aa11.2□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 PPT1P50897 306 aa11.19□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 RAB2AP61019 212 aa11.19□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 LINC01556Q5JQF7 62 aa11.19□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 ARL6IP6Q8N6S5 226 aa11.19□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 SLC25A29Q8N8R3 303 aa11.19□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 DNAH8Q96JB1 4490 aa11.19□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 FBLL1A6NHQ2 334 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 HMGB3O15347 200 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 ACOT6Q3I5F7 207 aaPredicted RBP11.18□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 DPPA3Q6W0C5 159 aa11.18□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 ASB13Q8WXK3 278 aa11.18□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 KCNS1Q96KK3 526 aa11.18□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 C11orf21Q9P2W6 132 aa11.18□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 IGLV5-52A0A0A0MRZ9 124 aa11.17□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 A0A1W2PPV4 95 aa11.17□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 IBA57-AS1B1ANH7 110 aa11.17□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 PSCAO43653 123 aa11.17□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 SSNA1O43805 119 aa11.17□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 ZNF80P51504 273 aaPredicted RBP11.17□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 CFAP126Q5VTH2 177 aa11.17□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 DMBT1Q9UGM3 2413 aaPredicted RBP11.17□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 ZNF876PQ49A33 203 aa11.16□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 OR10G9Q8NGN4 311 aa11.16□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 OR10G7Q8NGN6 311 aa11.16□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 RS1O15537 224 aa11.15□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 PFN1P07737 140 aaKnown RBP11.15□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 ARL14EPLP0DKL9 152 aa11.15□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 OR10J3Q5JRS4 329 aa11.15□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 Q8N814 137 aa11.15□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 NTN5Q8WTR8 489 aaPredicted RBP11.15□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 TMEM70Q9BUB7 260 aa11.15□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 Q9HAA7 133 aa11.15□□□□□ -0.62
VPS9D1-AS1-201ENST00000562298 TRAV8-6A0A0B4J262 113 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 TRBV6-4A0A1B0GX49 114 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 IGHV3-30P01768 117 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 IGHV3-33P01772 117 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 TCRAP04437 139 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 IGHV3-30-3P0DP02 117 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 IGHV3-30-5P0DP03 117 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 RHOHQ15669 191 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 TMEM75Q8N9X5 138 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 C9orf85Q96MD7 179 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 GCGP01275 180 aa11.13□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 STAG3L2P0CL84 134 aa11.13□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 STAG3L3P0CL85 134 aa11.13□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 LELP1Q5T871 98 aa11.13□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 SERTM2A0A1B0GWG4 89 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 PGPEP1LA6NFU8 196 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 FAM229AH3BQW9 127 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 CIDEAO60543 219 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 RNASE3P12724 160 aaKnown RBP11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 CDC34P49427 236 aaPredicted RBP11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 ZNF506Q5JVG8 444 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 Q8N3U1 123 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 C5orf17Q8NAS9 161 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 SUN5Q8TC36 379 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 FAM30AQ9NZY2 134 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 PSG8Q9UQ74 426 aa11.12□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 TAAR5O14804 337 aa11.11□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 Q6ZSN1 163 aa11.11□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 OR2G3Q8NGZ4 309 aa11.11□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 PTH2Q96A98 100 aa11.11□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 GTSF1LQ9H1H1 148 aa11.11□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 GGTLC3B5MD39 225 aa11.1□□□□□ -0.63
VPS9D1-AS1-201ENST00000562298 MGST1P10620 155 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms