RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 LYZL2Q7Z4W2 148 aa3.39□□□□□ -1.87
UBR1-203ENST00000562173 CMTM1Q8IZ96 169 aa3.39□□□□□ -1.87
UBR1-203ENST00000562173 OR10J6PQ8NGY7 276 aa3.39□□□□□ -1.87
UBR1-203ENST00000562173 RNASE11Q8TAA1 199 aaKnown RBP3.39□□□□□ -1.87
UBR1-203ENST00000562173 BLNKQ8WV28 456 aa3.39□□□□□ -1.87
UBR1-203ENST00000562173 MITD1Q8WV92 249 aa3.39□□□□□ -1.87
UBR1-203ENST00000562173 CNBD2Q96M20 576 aa3.39□□□□□ -1.87
UBR1-203ENST00000562173 KIR2DL4Q99706 377 aa3.39□□□□□ -1.87
UBR1-203ENST00000562173 RTBDNQ9BSG5 229 aaPredicted RBP3.39□□□□□ -1.87
UBR1-203ENST00000562173 PDCD10Q9BUL8 212 aa3.39□□□□□ -1.87
UBR1-203ENST00000562173 GEMIN7Q9H840 131 aaKnown RBP3.39□□□□□ -1.87
UBR1-203ENST00000562173 SCN3BQ9NY72 215 aa3.39□□□□□ -1.87
UBR1-203ENST00000562173 IGHV3-73A0A0B4J1V6 119 aa3.38□□□□□ -1.87
UBR1-203ENST00000562173 SMCO3A2RU48 225 aa3.38□□□□□ -1.87
UBR1-203ENST00000562173 H3BNG1 76 aa3.38□□□□□ -1.87
UBR1-203ENST00000562173 H7BYZ3 331 aa3.38□□□□□ -1.87
UBR1-203ENST00000562173 GSTZ1O43708 216 aaPredicted RBP3.38□□□□□ -1.87
UBR1-203ENST00000562173 HPGDSO60760 199 aa3.38□□□□□ -1.87
UBR1-203ENST00000562173 EIF3GO75821 320 aaKnown RBP eCLIP3.38□□□□□ -1.87
UBR1-203ENST00000562173 ANXA3P12429 323 aa3.38□□□□□ -1.87
UBR1-203ENST00000562173 LGI3Q8N145 548 aa3.38□□□□□ -1.87
UBR1-203ENST00000562173 OR1L4Q8NGR5 311 aa3.38□□□□□ -1.87
UBR1-203ENST00000562173 RNASEH2CQ8TDP1 164 aaKnown RBP3.38□□□□□ -1.87
UBR1-203ENST00000562173 HHLA3Q9XRX5 114 aa3.38□□□□□ -1.87
UBR1-203ENST00000562173 IGKV2-40A0A087WW87 121 aaPredicted RBP3.37□□□□□ -1.87
UBR1-203ENST00000562173 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 HSBP1L1C9JCN9 74 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 IGKV2D-40P01614 121 aaPredicted RBP3.37□□□□□ -1.87
UBR1-203ENST00000562173 RNASE4P34096 147 aaKnown RBP3.37□□□□□ -1.87
UBR1-203ENST00000562173 PRSS3P35030 304 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 CBX5P45973 191 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 GALR1P47211 349 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 RND3P61587 244 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 RRAS2P62070 204 aaPredicted RBP3.37□□□□□ -1.87
UBR1-203ENST00000562173 ASAH1Q13510 395 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 ARL6IP1Q15041 203 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 SCGB2B2Q4G0G5 96 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 SPATA31B1PQ5VZV4 182 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 KCNIP4Q6PIL6 250 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 DPPA3Q6W0C5 159 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 ZNF493Q6ZR52 646 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 NEGR1Q7Z3B1 354 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 PACRGLQ8N7B6 248 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 Q8TAT8 98 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 DTD1Q8TEA8 209 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 TRGV9Q99603 122 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 SHANK2-AS3Q9BTD1 123 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.37□□□□□ -1.87
UBR1-203ENST00000562173 ANAPC11Q9NYG5 84 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 TPRKBQ9Y3C4 175 aa3.37□□□□□ -1.87
UBR1-203ENST00000562173 RBFOX3A6NFN3 312 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 SNRPGP15A8MWD9 76 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 ATP5HO75947 161 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 CDS2O95674 445 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 OR5G3P0C626 314 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 EVI2AP22794 236 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 SRIP30626 198 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 RCVRNP35243 200 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 RPL13AP40429 203 aaKnown RBP3.36□□□□□ -1.87
UBR1-203ENST00000562173 TCL1AP56279 114 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 TAS2R46P59540 309 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 SLC38A11Q08AI6 406 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 NEDD8Q15843 81 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 C1orf194Q5T5A4 169 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 TMEM256Q8N2U0 113 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 OR10P1Q8NGE3 313 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 OR52E5Q8NH55 327 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 AGPAT4-IT1Q9H0P7 198 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 TMEM222Q9H0R3 208 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 NAA60Q9H7X0 242 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 ZNF331Q9NQX6 463 aaPredicted RBP3.36□□□□□ -1.87
UBR1-203ENST00000562173 DIABLOQ9NR28 239 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 COMMD3Q9UBI1 195 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 PRO0255Q9UI72 69 aa3.36□□□□□ -1.87
UBR1-203ENST00000562173 TRGV4A0A0C4DH28 118 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 C7orf71A4D174 169 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 RS1O15537 224 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 C1QBP02746 253 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 PLP1P60201 277 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 NCS1P62166 190 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 MRPL23Q16540 153 aaKnown RBP3.35□□□□□ -1.87
UBR1-203ENST00000562173 UBE2NLQ5JXB2 153 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 CYP2G1PQ6ZSU1 146 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 EXOC3-AS1Q8N2X6 119 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 ZFAND2AQ8N6M9 145 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 RAB2BQ8WUD1 216 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 FAM19A4Q96LR4 140 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 MRPL32Q9BYC8 188 aaKnown RBP3.35□□□□□ -1.87
UBR1-203ENST00000562173 COPZ2Q9P299 210 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 SSR3Q9UNL2 185 aa3.35□□□□□ -1.87
UBR1-203ENST00000562173 CSDC2Q9Y534 153 aaKnown RBP3.35□□□□□ -1.87
UBR1-203ENST00000562173 MUC17Q685J3 4493 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 FSIP2Q5CZC0 6907 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 IGLV8-61A0A075B6I0 122 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 FAM74A7A6NL05 159 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 GNRH2O43555 120 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 SERF1AO75920 110 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 LINC00869P0C866 280 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 KRTAP10-8P60410 259 aa3.34□□□□□ -1.87
UBR1-203ENST00000562173 AKR1C1Q04828 323 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms