RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TRAV10A0A0B4J240 114 aa9.5□□□□□ -0.89
CDH1-204ENST00000562118 CBY3A6NI87 242 aa9.5□□□□□ -0.89
CDH1-204ENST00000562118 EMP1P54849 157 aa9.5□□□□□ -0.89
CDH1-204ENST00000562118 UBE2G1P62253 170 aa9.5□□□□□ -0.89
CDH1-204ENST00000562118 LGALS9BQ3B8N2 356 aa9.5□□□□□ -0.89
CDH1-204ENST00000562118 ZNF506Q5JVG8 444 aa9.5□□□□□ -0.89
CDH1-204ENST00000562118 DNLZQ5SXM8 178 aa9.5□□□□□ -0.89
CDH1-204ENST00000562118 SMIM12Q96EX1 92 aa9.5□□□□□ -0.89
CDH1-204ENST00000562118 GSN-AS1Q9NRJ2 163 aa9.5□□□□□ -0.89
CDH1-204ENST00000562118 TRGV11A0A075B6L2 103 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 IGHV3-16A0A0C4DH30 117 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 TYMSP04818 313 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 HTN1P15515 57 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 RPL35P42766 123 aaKnown RBP9.49□□□□□ -0.89
CDH1-204ENST00000562118 TCTAP57738 103 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 FAM159AQ6UWV7 190 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 KCNS1Q96KK3 526 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 FAM210BQ96KR6 192 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 DERL1Q9BUN8 251 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 NOP10Q9NPE3 64 aaKnown RBP9.49□□□□□ -0.89
CDH1-204ENST00000562118 MDFICQ9P1T7 246 aa9.49□□□□□ -0.89
CDH1-204ENST00000562118 MUC4Q99102 2169 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 KMT2AQ03164 3969 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 HYDINQ4G0P3 5121 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 TRBV20OR9-2A0A075B6H5 130 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 IGKV3D-20A0A0C4DH25 116 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 RBFOX3A6NFN3 312 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 FABP5P3A8MUU1 101 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 SNURFLB1AK76 121 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 TMEM250H0YL14 139 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 DAD1P61803 113 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 MUC21Q5SSG8 566 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 ZNF767PQ75MW2 155 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 PTH2Q96A98 100 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 C9orf85Q96MD7 179 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 FAM210AQ96ND0 272 aa9.48□□□□□ -0.89
CDH1-204ENST00000562118 DEFB131BA0A096LNP1 70 aa9.47□□□□□ -0.89
CDH1-204ENST00000562118 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
CDH1-204ENST00000562118 FAM162BQ5T6X4 162 aa9.47□□□□□ -0.89
CDH1-204ENST00000562118 RASL10AQ92737 203 aa9.47□□□□□ -0.89
CDH1-204ENST00000562118 SPXQ9BT56 116 aa9.47□□□□□ -0.89
CDH1-204ENST00000562118 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
CDH1-204ENST00000562118 KLK5Q9Y337 293 aaPredicted RBP9.47□□□□□ -0.89
CDH1-204ENST00000562118 NACAE9PAV3 2078 aa9.47□□□□□ -0.89
CDH1-204ENST00000562118 C9JCJ5 164 aa9.46□□□□□ -0.9
CDH1-204ENST00000562118 GNRH2O43555 120 aa9.46□□□□□ -0.9
CDH1-204ENST00000562118 SH2D1AO60880 128 aa9.46□□□□□ -0.9
CDH1-204ENST00000562118 CXCL1P09341 107 aa9.46□□□□□ -0.9
CDH1-204ENST00000562118 RNASE3P12724 160 aaKnown RBP9.46□□□□□ -0.9
CDH1-204ENST00000562118 Q6ZTI0 123 aa9.46□□□□□ -0.9
CDH1-204ENST00000562118 BAGE2Q86Y30 109 aa9.46□□□□□ -0.9
CDH1-204ENST00000562118 NDUFAF3Q9BU61 184 aa9.46□□□□□ -0.9
CDH1-204ENST00000562118 APLNQ9ULZ1 77 aa9.46□□□□□ -0.9
CDH1-204ENST00000562118 KRBOX1C9JBD0 128 aa9.45□□□□□ -0.9
CDH1-204ENST00000562118 CENPWQ5EE01 88 aa9.45□□□□□ -0.9
CDH1-204ENST00000562118 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
CDH1-204ENST00000562118 C19orf71A6NCJ1 209 aa9.44□□□□□ -0.9
CDH1-204ENST00000562118 ATP5G1P05496 136 aa9.44□□□□□ -0.9
CDH1-204ENST00000562118 DEFB130BP0DP73 79 aa9.44□□□□□ -0.9
CDH1-204ENST00000562118 DEFB130AP0DP74 79 aa9.44□□□□□ -0.9
CDH1-204ENST00000562118 SCRT2Q9NQ03 307 aa9.44□□□□□ -0.9
CDH1-204ENST00000562118 NAGKQ9UJ70 344 aa9.44□□□□□ -0.9
CDH1-204ENST00000562118 IGHV4-4A0A075B6R2 117 aa9.43□□□□□ -0.9
CDH1-204ENST00000562118 LCE6AA0A183 80 aa9.43□□□□□ -0.9
CDH1-204ENST00000562118 IFITM2Q01629 132 aa9.43□□□□□ -0.9
CDH1-204ENST00000562118 NHLRC2Q8NBF2 726 aa9.43□□□□□ -0.9
CDH1-204ENST00000562118 SMDT1Q9H4I9 107 aa9.43□□□□□ -0.9
CDH1-204ENST00000562118 MED9Q9NWA0 146 aa9.43□□□□□ -0.9
CDH1-204ENST00000562118 IL36BQ9NZH7 164 aa9.43□□□□□ -0.9
CDH1-204ENST00000562118 TRGV1A0A0A0MS02 117 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 GAGE12BA1L429 117 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 RAB19A4D1S5 217 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 H3BNG1 76 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 M0R2P5 195 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 GAGE7O76087 117 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 GAGE12FP0CL80 117 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 GAGE12GP0CL81 117 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 GAGE12IP0CL82 117 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 MED14OSP0DP75 135 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 HOXA5P20719 270 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 GNG4P50150 75 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 TOR2AQ5JU69 321 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 POM121L12Q8N7R1 296 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 PARLQ9H300 379 aa9.42□□□□□ -0.9
CDH1-204ENST00000562118 B4DEV8 164 aa9.41□□□□□ -0.9
CDH1-204ENST00000562118 SRP19P09132 144 aaKnown RBP9.41□□□□□ -0.9
CDH1-204ENST00000562118 LINC00476Q8WZB0 136 aa9.41□□□□□ -0.9
CDH1-204ENST00000562118 MRPL16Q9NX20 251 aaKnown RBP9.41□□□□□ -0.9
CDH1-204ENST00000562118 LY96Q9Y6Y9 160 aa9.41□□□□□ -0.9
CDH1-204ENST00000562118 IGLL5B9A064 214 aa9.4□□□□□ -0.9
CDH1-204ENST00000562118 NXPH4O95158 308 aa9.4□□□□□ -0.9
CDH1-204ENST00000562118 ASIPP42127 132 aa9.4□□□□□ -0.9
CDH1-204ENST00000562118 TMEM88Q6PEY1 159 aa9.4□□□□□ -0.9
CDH1-204ENST00000562118 PCNPQ8WW12 178 aaKnown RBP9.4□□□□□ -0.9
CDH1-204ENST00000562118 SSBP4Q9BWG4 385 aaPredicted RBP9.4□□□□□ -0.9
CDH1-204ENST00000562118 TRAV4A0A0B4J268 109 aa9.39□□□□□ -0.91
CDH1-204ENST00000562118 PGPEP1LA6NFU8 196 aa9.39□□□□□ -0.91
CDH1-204ENST00000562118 C9JQL5 133 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms