RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 TCTE3Q8IZS6 198 aa0.31□□□□□ -2.36
CHD9-204ENST00000561869 SMIM7Q9BQ49 75 aa0.31□□□□□ -2.36
CHD9-204ENST00000561869 DNAJC15Q9Y5T4 150 aa0.31□□□□□ -2.36
CHD9-204ENST00000561869 MYH1P12882 1939 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 NEBP20929 6669 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 KIDINS220Q9ULH0 1771 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 IGHV1-24A0A0C4DH33 117 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 LOC107984156A0A0G2JMH3 177 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 TMEM30CPA0ZSE6 113 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 OR2H2O95918 312 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 MT-ND4LP03901 98 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 CD3DP04234 171 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 DBIP07108 87 aaKnown RBP0.3□□□□□ -2.36
CHD9-204ENST00000561869 PAEPP09466 180 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 HLA-DRB4P13762 266 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 HIST1H1BP16401 226 aaKnown RBP0.3□□□□□ -2.36
CHD9-204ENST00000561869 ADCYAP1P18509 176 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 EVI2AP22794 236 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 CKS2P33552 79 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 CAV3P56539 151 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 SNRPD3P62318 126 aaKnown RBP0.3□□□□□ -2.36
CHD9-204ENST00000561869 ALX1Q15699 326 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 LYPD5Q6UWN5 251 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 ARL17AQ8IVW1 177 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 OR8J3Q8NGG0 315 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 PLAC4Q8WY50 150 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 MAGOHBQ96A72 148 aaKnown RBP0.3□□□□□ -2.36
CHD9-204ENST00000561869 DMAC1Q96GE9 116 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 AIF1LQ9BQI0 150 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 MRPL36Q9P0J6 103 aaKnown RBP0.3□□□□□ -2.36
CHD9-204ENST00000561869 COMMD3Q9UBI1 195 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 HLA-DRB4X5D2U9 266 aa0.3□□□□□ -2.36
CHD9-204ENST00000561869 UHRF1BP1LA0JNW5 1464 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 APCP25054 2843 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 ABCA4P78363 2273 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 MDN1Q9NU22 5596 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 A0A0G2JMM0 328 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 HIGD1CA8MV81 97 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 CDC42EP2O14613 210 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 TPST1O60507 370 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 KDELR1P24390 212 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 AKR1D1P51857 326 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 PCBD1P61457 104 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 PLGLB1Q02325 96 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 FXYD3Q14802 87 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 GLYATL3Q5SZD4 288 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 TMEM244Q5VVB8 128 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 IDO2Q6ZQW0 420 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 C5orf56Q8N8D9 126 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 SLC35B3Q9H1N7 401 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 NAV3Q8IVL0 2385 aa0.29□□□□□ -2.36
CHD9-204ENST00000561869 HELZP42694 1942 aaKnown RBP0.28□□□□□ -2.36
CHD9-204ENST00000561869 KMT2DO14686 5537 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 KDM5CP41229 1560 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 LRP5O75197 1615 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 TRAV2A0A0B4J234 112 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 TRBV10-1A0A0K0K1A3 114 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 CXorf51AA0A1B0GTR3 108 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 LOC101927531A0A1B0GV80 90 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 LOC105371267A0A1B0GV96 52 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 IGKCP01834 107 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 CMPK1P30085 196 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 FXYD6P3P58550 94 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 SPATA8Q6RVD6 105 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 SLC25A26Q70HW3 274 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 Q86TA4 180 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 LINC00208Q96KT6 92 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 BANF2Q9H503 90 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 CALML5Q9NZT1 146 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 TRPM7Q96QT4 1865 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 ARHGEF10O15013 1369 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 CPDO75976 1380 aa0.28□□□□□ -2.36
CHD9-204ENST00000561869 OVOS2A0A0J9YW53 1432 aa0.28□□□□□ -2.37
CHD9-204ENST00000561869 BLMP54132 1417 aaPredicted RBP0.28□□□□□ -2.37
CHD9-204ENST00000561869 OVOS2Q6IE36 1432 aa0.28□□□□□ -2.37
CHD9-204ENST00000561869 ZCCHC6Q5VYS8 1495 aaKnown RBP0.28□□□□□ -2.37
CHD9-204ENST00000561869 CDK12Q9NYV4 1490 aaPredicted RBP0.28□□□□□ -2.37
CHD9-204ENST00000561869 ESPL1Q14674 2120 aa0.28□□□□□ -2.37
CHD9-204ENST00000561869 ATG2AQ2TAZ0 1938 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 ARPC5O15511 151 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 YPEL1O60688 119 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 SMIM24O75264 130 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 TSPAN19P0C672 248 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 SPINT3P49223 89 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 ZNF137PP52743 207 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 RPL37P61927 97 aaKnown RBP0.27□□□□□ -2.37
CHD9-204ENST00000561869 SPINK13Q1W4C9 94 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 ATP6V0E2Q8NHE4 81 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 PPDPFLQ8WWR9 84 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 ATG5Q9H1Y0 275 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 BATF3Q9NR55 127 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 TAS2R8Q9NYW2 309 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 LSM2Q9Y333 95 aaKnown RBP0.27□□□□□ -2.37
CHD9-204ENST00000561869 CEP152O94986 1710 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 DLEC1Q9Y238 1755 aa0.27□□□□□ -2.37
CHD9-204ENST00000561869 KIAA0100Q14667 2235 aaKnown RBP0.26□□□□□ -2.37
CHD9-204ENST00000561869 ABCA1O95477 2261 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 A0A096LNT2 108 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 M0R2P5 195 aa0.26□□□□□ -2.37
CHD9-204ENST00000561869 KRTAP2-3P0C7H8 128 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms