RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SLURP1P55000 103 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 TCL1AP56279 114 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 SYNJ2BPP57105 145 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 DEFB136Q30KP8 78 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 COA6Q5JTJ3 125 aaKnown RBP4.9□□□□□ -1.63
CAPN3-210ENST00000561817 TMEM136Q6ZRR5 245 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 TCF24Q7RTU0 167 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 GBGT1Q8N5D6 347 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 Q8TAT8 98 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 GFRA4Q9GZZ7 299 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 SETD2Q9BYW2 2564 aaPredicted RBP4.9□□□□□ -1.63
CAPN3-210ENST00000561817 IFITM10A6NMD0 228 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 HIGD1CA8MV81 97 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 A8MWL6 223 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 LINC01619G3V211 115 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 K7EQG2 157 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 SH2D1AO60880 128 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 P01737 135 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 CT45A10P0DMU9 189 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 CD28P10747 220 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 CBLN1P23435 193 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 ZNF138P52744 262 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 PROK1P58294 105 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 DEFB1P60022 68 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 SNRPEP62304 92 aaKnown RBP4.89□□□□□ -1.63
CAPN3-210ENST00000561817 RPL19P84098 196 aaKnown RBP4.89□□□□□ -1.63
CAPN3-210ENST00000561817 FABP9Q0Z7S8 132 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 VAMP3Q15836 100 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 KRTAP24-1Q3LI83 254 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 C6orf226Q5I0X4 101 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 APRG1Q8IVJ8 170 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 OR1N2Q8NGR9 330 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 GNB1LQ9BYB4 327 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 C11orf21Q9P2W6 132 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 SELENOKQ9Y6D0 94 aa4.89□□□□□ -1.63
CAPN3-210ENST00000561817 OVOL1O14753 267 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 GZMBP10144 247 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 KRTAP10-3P60369 221 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 FAM162BQ5T6X4 162 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 PRR9Q5T870 116 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 RASL11AQ6T310 242 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 ATP5L2Q7Z4Y8 100 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 ZFAND2AQ8N6M9 145 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 GATD1Q8NB37 220 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 KLHL30-AS1Q8NEE0 82 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 OR11H1Q8NG94 326 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 OR8A1Q8NGG7 326 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 OR2D3Q8NGH3 330 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 TMEM158Q8WZ71 300 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 DLX4Q92988 240 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-210ENST00000561817 LINC00477Q96M19 166 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 DUX3Q96PT4 197 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 MS4A6AQ9H2W1 248 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 NAT8BQ9UHF3 227 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 CSDC2Q9Y534 153 aaKnown RBP4.88□□□□□ -1.63
CAPN3-210ENST00000561817 LENEPQ9Y5L5 61 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 TRAPPC1Q9Y5R8 145 aa4.88□□□□□ -1.63
CAPN3-210ENST00000561817 TRBV7-9A0A0J9YWB2 115 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 A8MTW9 85 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 F6UB75 175 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 RS1O15537 224 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 SPINK4O60575 86 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 IGLC6P0CF74 106 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 ZNF705DP0CH99 300 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-210ENST00000561817 ZNF705BP0CI00 300 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-210ENST00000561817 CRISP2P16562 243 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 KIR3DS1Q14943 382 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 COX19Q49B96 90 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 GFI1BQ5VTD9 330 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 SAMD13Q5VXD3 122 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 MRPL54Q6P161 138 aaKnown RBP4.87□□□□□ -1.63
CAPN3-210ENST00000561817 C12orf54Q6X4T0 127 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 Q6ZQT7 251 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 HIST3H2BBQ8N257 126 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 ZNF738Q8NE65 137 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 OR9G4Q8NGQ1 327 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 TP53TG3Q9ULZ0 132 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 JMJD1CQ15652 2540 aa4.87□□□□□ -1.63
CAPN3-210ENST00000561817 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.63
CAPN3-210ENST00000561817 IGKV3-7A0A075B6H7 116 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 TRAV2A0A0B4J234 112 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 IGKV3D-20A0A0C4DH25 116 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 FABP5P3A8MUU1 101 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 SNURFLB1AK76 121 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 MT-ND6P03923 174 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 CTRLP40313 264 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 NDUFA6P56556 154 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 HIST1H1AQ02539 215 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-210ENST00000561817 DEFB114Q30KQ6 69 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 TMEM78Q5T7P6 136 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 PGLYRP4Q96LB8 373 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 NDFIP1Q9BT67 221 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 CNFNQ9BYD5 112 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 SIGLEC8Q9NYZ4 499 aa4.86□□□□□ -1.63
CAPN3-210ENST00000561817 TSSC4Q9Y5U2 329 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-210ENST00000561817 SORL1Q92673 2214 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 A0A0J9YX75 114 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 A0A1B0GUS0 222 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 A0A1B0GW15 77 aa4.85□□□□□ -1.63
CAPN3-210ENST00000561817 TMEM189A5PLL7 270 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms