RNA–Protein interactions for RNA: ENST00000561256.5

USP3-AS1-210, USP3 antisense RNA 1, humanhuman

TSL 3

Gene USP3-AS1, Length 562 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-210ENST00000561256 C5orf17Q8NAS9 161 aa11.84□□□□□ -0.51
USP3-AS1-210ENST00000561256 SUN5Q8TC36 379 aa11.84□□□□□ -0.51
USP3-AS1-210ENST00000561256 NDFIP1Q9BT67 221 aa11.84□□□□□ -0.51
USP3-AS1-210ENST00000561256 IGHV1OR15-1A0A075B7D0 117 aa11.83□□□□□ -0.52
USP3-AS1-210ENST00000561256 STOML3Q8TAV4 291 aa11.83□□□□□ -0.52
USP3-AS1-210ENST00000561256 PFDN1O60925 122 aa11.82□□□□□ -0.52
USP3-AS1-210ENST00000561256 NXPH4O95158 308 aa11.82□□□□□ -0.52
USP3-AS1-210ENST00000561256 SUMO1P63165 101 aaKnown RBP11.82□□□□□ -0.52
USP3-AS1-210ENST00000561256 FAM159AQ6UWV7 190 aa11.82□□□□□ -0.52
USP3-AS1-210ENST00000561256 CYTL1Q9NRR1 136 aa11.82□□□□□ -0.52
USP3-AS1-210ENST00000561256 TRGV1A0A0A0MS02 117 aa11.81□□□□□ -0.52
USP3-AS1-210ENST00000561256 FBLL1A6NHQ2 334 aaKnown RBP11.81□□□□□ -0.52
USP3-AS1-210ENST00000561256 IBA57Q5T440 356 aaKnown RBP11.81□□□□□ -0.52
USP3-AS1-210ENST00000561256 C18orf15Q96N68 181 aa11.81□□□□□ -0.52
USP3-AS1-210ENST00000561256 NKX6-2Q9C056 277 aaPredicted RBP11.81□□□□□ -0.52
USP3-AS1-210ENST00000561256 TREM1Q9NP99 234 aa11.81□□□□□ -0.52
USP3-AS1-210ENST00000561256 GSN-AS1Q9NRJ2 163 aa11.81□□□□□ -0.52
USP3-AS1-210ENST00000561256 TNFRSF18Q9Y5U5 241 aa11.81□□□□□ -0.52
USP3-AS1-210ENST00000561256 A0A1W2PRE2 83 aa11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 IFNA7P01567 189 aa11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 TCRAP04437 139 aa11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 GNG5P63218 68 aa11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 ZNF415Q09FC8 603 aa11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 PRR9Q5T870 116 aa11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 NFE4Q86UQ8 179 aa11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 ZNF471Q9BX82 626 aaPredicted RBP11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 EPDR1Q9UM22 224 aa11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 ICOSQ9Y6W8 199 aa11.8□□□□□ -0.52
USP3-AS1-210ENST00000561256 TRAV21A0A0B4J279 112 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 UMAD1C9J7I0 102 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 PAX4O43316 350 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 BCL2L11O43521 198 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 SEC11BP0C7V7 166 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 DNAH10OSP0CZ25 163 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 PPT1P50897 306 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 KRTAP10-1P60331 282 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 ZNF726P1Q15940 193 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 Q6AWC8 147 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 C11orf72Q8NBR9 251 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 OR11H4Q8NGC9 324 aa11.79□□□□□ -0.52
USP3-AS1-210ENST00000561256 TRGV11A0A075B6L2 103 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 A0A087WTM6 91 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 TRAV8-1A0A0A6YYK1 113 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 MAP1LC3B2A6NCE7 125 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 TCL1AP56279 114 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 ZFP69Q49AA0 526 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 MUC21Q5SSG8 566 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 CYB561D1Q8N8Q1 229 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 MAP1LC3BQ9GZQ8 125 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 NAGKQ9UJ70 344 aa11.78□□□□□ -0.52
USP3-AS1-210ENST00000561256 FAT1Q14517 4588 aa11.77□□□□□ -0.52
USP3-AS1-210ENST00000561256 GGTLC3B5MD39 225 aa11.77□□□□□ -0.53
USP3-AS1-210ENST00000561256 FGF8P55075 233 aaPredicted RBP11.77□□□□□ -0.53
USP3-AS1-210ENST00000561256 UBE2G2P60604 165 aa11.77□□□□□ -0.53
USP3-AS1-210ENST00000561256 SAPCD1Q5SSQ6 148 aa11.77□□□□□ -0.53
USP3-AS1-210ENST00000561256 TP53TG3Q9ULZ0 132 aa11.77□□□□□ -0.53
USP3-AS1-210ENST00000561256 PSG8Q9UQ74 426 aa11.77□□□□□ -0.53
USP3-AS1-210ENST00000561256 KLF12Q9Y4X4 402 aa11.77□□□□□ -0.53
USP3-AS1-210ENST00000561256 TRAV9-2A0A087WT02 112 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 F6UZH7 168 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 SPINK4O60575 86 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 IGHV3-53P01767 116 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 SMR3BP02814 79 aaPredicted RBP11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 TPT1P13693 172 aaKnown RBP11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 FLI1Q01543 452 aaPredicted RBP11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 EIF5AL1Q6IS14 154 aaKnown RBP11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 DPPA3Q6W0C5 159 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 TMUB2Q71RG4 321 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 TMEM75Q8N9X5 138 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 KCNS1Q96KK3 526 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 SGK494Q96LW2 274 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 SPXQ9BT56 116 aa11.76□□□□□ -0.53
USP3-AS1-210ENST00000561256 TMEM183BQ1AE95 376 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 SMUG1Q53HV7 270 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 LYPD5Q6UWN5 251 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 Q6ZQT7 251 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 PRNTQ86SH4 94 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 FAM213BQ8TBF2 198 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 SFT2D1Q8WV19 159 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 HIST1H2BAQ96A08 127 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 MDFICQ9P1T7 246 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 PRO0255Q9UI72 69 aa11.75□□□□□ -0.53
USP3-AS1-210ENST00000561256 TDRG1Q3Y452 100 aa11.74□□□□□ -0.53
USP3-AS1-210ENST00000561256 Q6ZNX1 250 aa11.74□□□□□ -0.53
USP3-AS1-210ENST00000561256 TCTE3Q8IZS6 198 aa11.74□□□□□ -0.53
USP3-AS1-210ENST00000561256 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
USP3-AS1-210ENST00000561256 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
USP3-AS1-210ENST00000561256 FAM74A7A6NL05 159 aa11.73□□□□□ -0.53
USP3-AS1-210ENST00000561256 PEX7O00628 323 aa11.73□□□□□ -0.53
USP3-AS1-210ENST00000561256 GCSHP23434 173 aa11.73□□□□□ -0.53
USP3-AS1-210ENST00000561256 SLAQ13239 276 aa11.73□□□□□ -0.53
USP3-AS1-210ENST00000561256 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
USP3-AS1-210ENST00000561256 CST9LP1Q5W188 147 aa11.73□□□□□ -0.53
USP3-AS1-210ENST00000561256 TVP23CQ96ET8 276 aa11.73□□□□□ -0.53
USP3-AS1-210ENST00000561256 TCEAL7Q9BRU2 100 aa11.73□□□□□ -0.53
USP3-AS1-210ENST00000561256 MRPL16Q9NX20 251 aaKnown RBP11.73□□□□□ -0.53
USP3-AS1-210ENST00000561256 FAM229AH3BQW9 127 aa11.72□□□□□ -0.53
USP3-AS1-210ENST00000561256 GCGP01275 180 aa11.72□□□□□ -0.53
USP3-AS1-210ENST00000561256 FHITP49789 147 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms